RNA–Protein interactions for RNA: ENST00000635852.1

LINC02009-201, Transcript of long intergenic non-protein coding RNA 2009, humanhuman

TSL 3 BASIC

Gene LINC02009, Length 2,951 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02009-201ENST00000635852 ANP32CO43423 234 aa12.68□□□□□ -0.38
LINC02009-201ENST00000635852 HIRIP3Q9BW71 556 aaPredicted RBP12.66□□□□□ -0.38
LINC02009-201ENST00000635852 SETD5Q9C0A6 1442 aa12.66□□□□□ -0.38
LINC02009-201ENST00000635852 ERICH6Q7L0X2 663 aa12.64□□□□□ -0.39
LINC02009-201ENST00000635852 CDK11AQ9UQ88 783 aaPredicted RBP12.63□□□□□ -0.39
LINC02009-201ENST00000635852 TIMELESSQ9UNS1 1208 aa12.63□□□□□ -0.39
LINC02009-201ENST00000635852 ARHGAP35Q9NRY4 1499 aa12.62□□□□□ -0.39
LINC02009-201ENST00000635852 BIVM-ERCC5R4GMW8 1640 aa12.61□□□□□ -0.39
LINC02009-201ENST00000635852 ATAD2BQ9ULI0 1458 aa12.6□□□□□ -0.39
LINC02009-201ENST00000635852 IRX6P78412 446 aaPredicted RBP12.59□□□□□ -0.39
LINC02009-201ENST00000635852 MYT1LQ9UL68 1186 aa12.55□□□□□ -0.4
LINC02009-201ENST00000635852 HNRNPUQ00839 825 aaKnown RBP eCLIP12.55□□□□□ -0.4
LINC02009-201ENST00000635852 FAM50AQ14320 339 aaKnown RBP12.55□□□□□ -0.4
LINC02009-201ENST00000635852 KIF27Q86VH2 1401 aa12.55□□□□□ -0.4
LINC02009-201ENST00000635852 TIAM1Q13009 1591 aa12.55□□□□□ -0.4
LINC02009-201ENST00000635852 PHLDB1Q86UU1 1377 aa12.54□□□□□ -0.4
LINC02009-201ENST00000635852 MAP3K1Q13233 1512 aa12.53□□□□□ -0.4
LINC02009-201ENST00000635852 DEKP35659 375 aaKnown RBP12.53□□□□□ -0.4
LINC02009-201ENST00000635852 LRRC9Q6ZRR7 1453 aa12.51□□□□□ -0.41
LINC02009-201ENST00000635852 ERICH6BQ5W0A0 696 aa12.51□□□□□ -0.41
LINC02009-201ENST00000635852 PPP4R2Q9NY27 417 aa12.5□□□□□ -0.41
LINC02009-201ENST00000635852 CUX1P39880 1505 aa12.49□□□□□ -0.41
LINC02009-201ENST00000635852 TONSLQ96HA7 1378 aa12.47□□□□□ -0.41
LINC02009-201ENST00000635852 PRKCSHP14314 528 aaPredicted RBP12.46□□□□□ -0.41
LINC02009-201ENST00000635852 B4GALNT3Q6L9W6 998 aa12.42□□□□□ -0.42
LINC02009-201ENST00000635852 NOP58Q9Y2X3 529 aaKnown RBP12.42□□□□□ -0.42
LINC02009-201ENST00000635852 IGF1RP08069 1367 aa12.4□□□□□ -0.42
LINC02009-201ENST00000635852 FHAD1B1AJZ9 1412 aa12.4□□□□□ -0.42
LINC02009-201ENST00000635852 NBR1Q14596 966 aa12.39□□□□□ -0.43
LINC02009-201ENST00000635852 CC2D2AQ9P2K1 1620 aa12.39□□□□□ -0.43
LINC02009-201ENST00000635852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC02009-201ENST00000635852 PAK3O75914 559 aaPredicted RBP12.39□□□□□ -0.43
LINC02009-201ENST00000635852 CCDC184Q52MB2 194 aa12.39□□□□□ -0.43
LINC02009-201ENST00000635852 WASHC2AQ641Q2 1341 aa12.38□□□□□ -0.43
LINC02009-201ENST00000635852 CFAP43Q8NDM7 1665 aa12.38□□□□□ -0.43
LINC02009-201ENST00000635852 ATP1B4Q9UN42 357 aaPredicted RBP12.38□□□□□ -0.43
LINC02009-201ENST00000635852 P3H3Q8IVL6 736 aa12.36□□□□□ -0.43
LINC02009-201ENST00000635852 NCAPD3P42695 1498 aa12.36□□□□□ -0.43
LINC02009-201ENST00000635852 CCDC18Q5T9S5 1454 aa12.36□□□□□ -0.43
LINC02009-201ENST00000635852 HSPA5P11021 654 aaKnown RBP12.36□□□□□ -0.43
LINC02009-201ENST00000635852 PCF11O94913 1555 aaKnown RBP12.36□□□□□ -0.43
LINC02009-201ENST00000635852 UACAQ9BZF9 1416 aa12.36□□□□□ -0.43
LINC02009-201ENST00000635852 CARMIL1Q5VZK9 1371 aa12.35□□□□□ -0.43
LINC02009-201ENST00000635852 KDM5BQ9UGL1 1544 aa12.35□□□□□ -0.43
LINC02009-201ENST00000635852 HMGXB3Q12766 1538 aa12.34□□□□□ -0.43
LINC02009-201ENST00000635852 FAM9BQ8IZU0 186 aa12.34□□□□□ -0.43
LINC02009-201ENST00000635852 ZBED9Q6R2W3 1325 aa12.33□□□□□ -0.44
LINC02009-201ENST00000635852 HFM1A2PYH4 1435 aa12.32□□□□□ -0.44
LINC02009-201ENST00000635852 CNTLNQ9NXG0 1405 aa12.32□□□□□ -0.44
LINC02009-201ENST00000635852 NCOA2Q15596 1464 aa12.31□□□□□ -0.44
LINC02009-201ENST00000635852 PTPRKQ15262 1439 aa12.31□□□□□ -0.44
LINC02009-201ENST00000635852 FGD6Q6ZV73 1430 aa12.31□□□□□ -0.44
LINC02009-201ENST00000635852 ANO8Q9HCE9 1232 aaPredicted RBP12.31□□□□□ -0.44
LINC02009-201ENST00000635852 PRKRIP1Q9H875 184 aaPredicted RBP12.31□□□□□ -0.44
LINC02009-201ENST00000635852 MRS2Q9HD23 443 aa12.3□□□□□ -0.44
LINC02009-201ENST00000635852 AQRO60306 1485 aaKnown RBP eCLIP12.3□□□□□ -0.44
LINC02009-201ENST00000635852 CFTRP13569 1480 aa12.3□□□□□ -0.44
LINC02009-201ENST00000635852 PTPN23Q9H3S7 1636 aa12.29□□□□□ -0.44
LINC02009-201ENST00000635852 EIF4G2P78344 907 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC02009-201ENST00000635852 IPO9Q96P70 1041 aaKnown RBP12.29□□□□□ -0.44
LINC02009-201ENST00000635852 FHOD3Q2V2M9 1422 aa12.29□□□□□ -0.44
LINC02009-201ENST00000635852 FYCO1Q9BQS8 1478 aa12.28□□□□□ -0.44
LINC02009-201ENST00000635852 NAIPQ13075 1403 aa12.28□□□□□ -0.44
LINC02009-201ENST00000635852 ANP32AP39687 249 aaKnown RBP12.27□□□□□ -0.44
LINC02009-201ENST00000635852 CASKIN1Q8WXD9 1431 aa12.27□□□□□ -0.45
LINC02009-201ENST00000635852 C11orf95C9JLR9 678 aaPredicted RBP12.27□□□□□ -0.45
LINC02009-201ENST00000635852 RTL5Q5HYW3 569 aaPredicted RBP12.27□□□□□ -0.45
LINC02009-201ENST00000635852 FGD5Q6ZNL6 1462 aa12.26□□□□□ -0.45
LINC02009-201ENST00000635852 ZBTB47Q9UFB7 747 aaPredicted RBP12.26□□□□□ -0.45
LINC02009-201ENST00000635852 CCDC7Q96M83 1385 aa12.25□□□□□ -0.45
LINC02009-201ENST00000635852 FMN1Q68DA7 1419 aa12.24□□□□□ -0.45
LINC02009-201ENST00000635852 SALL2Q9Y467 1007 aaPredicted RBP12.24□□□□□ -0.45
LINC02009-201ENST00000635852 NCOA1Q15788 1441 aa12.23□□□□□ -0.45
LINC02009-201ENST00000635852 CCDC136Q96JN2 1154 aa12.23□□□□□ -0.45
LINC02009-201ENST00000635852 AKNAQ7Z591 1439 aa12.23□□□□□ -0.45
LINC02009-201ENST00000635852 DNAJC5BQ9UF47 199 aa12.23□□□□□ -0.45
LINC02009-201ENST00000635852 SMG6Q86US8 1419 aaKnown RBP12.22□□□□□ -0.45
LINC02009-201ENST00000635852 MTUS2Q5JR59 1369 aa12.21□□□□□ -0.45
LINC02009-201ENST00000635852 IL27Q8NEV9 243 aa12.21□□□□□ -0.45
LINC02009-201ENST00000635852 RNF123Q5XPI4 1314 aa12.21□□□□□ -0.46
LINC02009-201ENST00000635852 NUDCQ9Y266 331 aa12.2□□□□□ -0.46
LINC02009-201ENST00000635852 EFCAB5A4FU69 1503 aa12.2□□□□□ -0.46
LINC02009-201ENST00000635852 L3MBTL2Q969R5 705 aa12.19□□□□□ -0.46
LINC02009-201ENST00000635852 DENND4BO75064 1496 aaPredicted RBP12.19□□□□□ -0.46
LINC02009-201ENST00000635852 RRP7BPQ9NSQ0 103 aa12.18□□□□□ -0.46
LINC02009-201ENST00000635852 MYOM3Q5VTT5 1437 aa12.17□□□□□ -0.46
LINC02009-201ENST00000635852 KIF7Q2M1P5 1343 aa12.16□□□□□ -0.46
LINC02009-201ENST00000635852 SNAPC4Q5SXM2 1469 aa12.15□□□□□ -0.46
LINC02009-201ENST00000635852 RTN4Q9NQC3 1192 aaKnown RBP12.15□□□□□ -0.46
LINC02009-201ENST00000635852 CHIC2Q9UKJ5 165 aa12.15□□□□□ -0.46
LINC02009-201ENST00000635852 NBPF8Q3BBV2 869 aa12.14□□□□□ -0.47
LINC02009-201ENST00000635852 MPHOSPH9Q99550 1183 aa12.14□□□□□ -0.47
LINC02009-201ENST00000635852 HECW1Q76N89 1606 aa12.13□□□□□ -0.47
LINC02009-201ENST00000635852 PRDM2Q13029 1718 aa12.12□□□□□ -0.47
LINC02009-201ENST00000635852 FOXD1Q16676 465 aa12.12□□□□□ -0.47
LINC02009-201ENST00000635852 NPM2Q86SE8 214 aaKnown RBP12.12□□□□□ -0.47
LINC02009-201ENST00000635852 SPATA31E1Q6ZUB1 1445 aa12.11□□□□□ -0.47
LINC02009-201ENST00000635852 NEFMP07197 916 aa12.11□□□□□ -0.47
LINC02009-201ENST00000635852 LAS1LQ9Y4W2 734 aaKnown RBP12.11□□□□□ -0.47
LINC02009-201ENST00000635852 CNGB1Q14028 1251 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms