RNA–Protein interactions for RNA: ENST00000635822.2

TCF4-276, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 7,805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-276ENST00000635822 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.45■□□□□ 0.06
TCF4-276ENST00000635822 DNTTIP2Q5QJE6 756 aaKnown RBP15.42■□□□□ 0.06
TCF4-276ENST00000635822 ARID3CA6NKF2 412 aa15.4■□□□□ 0.06
TCF4-276ENST00000635822 NCLP19338 710 aaKnown RBP15.39■□□□□ 0.05
TCF4-276ENST00000635822 CDK11BP21127 795 aaKnown RBP15.37■□□□□ 0.05
TCF4-276ENST00000635822 ARID3AQ99856 593 aa15.36■□□□□ 0.05
TCF4-276ENST00000635822 PTMAP06454 111 aaKnown RBP15.35■□□□□ 0.05
TCF4-276ENST00000635822 TPRNQ4KMQ1 711 aa15.32■□□□□ 0.04
TCF4-276ENST00000635822 RGS3P49796 1198 aa15.31■□□□□ 0.04
TCF4-276ENST00000635822 WDR43Q15061 677 aaKnown RBP eCLIP15.29■□□□□ 0.04
TCF4-276ENST00000635822 GOLGA6L22H0YM25 854 aa15.28■□□□□ 0.04
TCF4-276ENST00000635822 CHIC2Q9UKJ5 165 aa15.27■□□□□ 0.04
TCF4-276ENST00000635822 EIF4G2P78344 907 aaKnown RBP eCLIP15.27■□□□□ 0.032e-7■■■■■ 31.9
TCF4-276ENST00000635822 VSIG10Q8N0Z9 540 aa15.26■□□□□ 0.03
TCF4-276ENST00000635822 PRKCSHP14314 528 aaPredicted RBP15.26■□□□□ 0.03
TCF4-276ENST00000635822 TIMELESSQ9UNS1 1208 aa15.25■□□□□ 0.03
TCF4-276ENST00000635822 SPRYD3Q8NCJ5 442 aa15.24■□□□□ 0.03
TCF4-276ENST00000635822 ZNF777Q9ULD5 760 aaPredicted RBP15.24■□□□□ 0.03
TCF4-276ENST00000635822 ZBTB7CA1YPR0 619 aa15.23■□□□□ 0.03
TCF4-276ENST00000635822 KDM2AQ9Y2K7 1162 aa15.22■□□□□ 0.03
TCF4-276ENST00000635822 ANO8Q9HCE9 1232 aaPredicted RBP15.22■□□□□ 0.03
TCF4-276ENST00000635822 L1TD1Q5T7N2 865 aaKnown RBP15.22■□□□□ 0.03
TCF4-276ENST00000635822 PNNQ9H307 717 aaKnown RBP15.22■□□□□ 0.03
TCF4-276ENST00000635822 GZF1Q9H116 711 aaPredicted RBP15.21■□□□□ 0.02
TCF4-276ENST00000635822 MSNP26038 577 aaKnown RBP15.19■□□□□ 0.02
TCF4-276ENST00000635822 PLCB2Q00722 1185 aa15.19■□□□□ 0.02
TCF4-276ENST00000635822 SIN3AQ96ST3 1273 aa15.19■□□□□ 0.02
TCF4-276ENST00000635822 HSP90AA2PQ14568 343 aaPredicted RBP15.18■□□□□ 0.02
TCF4-276ENST00000635822 IPO9Q96P70 1041 aaKnown RBP15.18■□□□□ 0.02
TCF4-276ENST00000635822 CEP162Q5TB80 1403 aa15.14■□□□□ 0.01
TCF4-276ENST00000635822 KCNH8Q96L42 1107 aa15.13■□□□□ 0.01
TCF4-276ENST00000635822 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
TCF4-276ENST00000635822 HSP90AB1P08238 724 aaKnown RBP15.1■□□□□ 0.01
TCF4-276ENST00000635822 RSPH6AQ9H0K4 717 aa15.1■□□□□ 0.01
TCF4-276ENST00000635822 SLKQ9H2G2 1235 aaPredicted RBP15.1■□□□□ 0.01
TCF4-276ENST00000635822 CLIP1P30622 1438 aa15.09■□□□□ 0.01
TCF4-276ENST00000635822 MYH16Q9H6N6 1097 aa15.08■□□□□ 0
TCF4-276ENST00000635822 RRP7BPQ9NSQ0 103 aa15.07■□□□□ 0
TCF4-276ENST00000635822 CCER2I3L3R5 266 aa15.06■□□□□ 0
TCF4-276ENST00000635822 FRAT1Q92837 279 aaPredicted RBP15.03■□□□□ -0
TCF4-276ENST00000635822 CHAF1AQ13111 956 aaPredicted RBP15.01□□□□□ -0.01
TCF4-276ENST00000635822 GOLGA6L3A6NEY3 463 aa15.01□□□□□ -0.01
TCF4-276ENST00000635822 HSCBQ8IWL3 235 aa15.01□□□□□ -0.01
TCF4-276ENST00000635822 FTSJ3Q8IY81 847 aaKnown RBP15.01□□□□□ -0.01
TCF4-276ENST00000635822 GSE1Q14687 1217 aa15□□□□□ -0.01
TCF4-276ENST00000635822 SLC4A3P48751 1232 aa15□□□□□ -0.01
TCF4-276ENST00000635822 NEUROD2Q15784 382 aa15□□□□□ -0.01
TCF4-276ENST00000635822 FANCIQ9NVI1 1328 aa15□□□□□ -0.01
TCF4-276ENST00000635822 CHGAP10645 457 aaKnown RBP14.99□□□□□ -0.01
TCF4-276ENST00000635822 PKNOX2Q96KN3 472 aa14.99□□□□□ -0.01
TCF4-276ENST00000635822 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.01
TCF4-276ENST00000635822 A0A0U1RQG5 324 aaPredicted RBP14.99□□□□□ -0.01
TCF4-276ENST00000635822 IL27Q8NEV9 243 aa14.98□□□□□ -0.01
TCF4-276ENST00000635822 TCERG1O14776 1098 aaKnown RBP14.97□□□□□ -0.01
TCF4-276ENST00000635822 FBLN2P98095 1184 aa14.97□□□□□ -0.01
TCF4-276ENST00000635822 USP35Q9P2H5 1018 aa14.95□□□□□ -0.02
TCF4-276ENST00000635822 CC2D1BQ5T0F9 858 aaKnown RBP14.93□□□□□ -0.02
TCF4-276ENST00000635822 TNNT3P45378 269 aaPredicted RBP14.93□□□□□ -0.02
TCF4-276ENST00000635822 ZRSR1Q15695 479 aaKnown RBP14.92□□□□□ -0.02
TCF4-276ENST00000635822 SCRIBQ14160 1630 aa14.92□□□□□ -0.02
TCF4-276ENST00000635822 CASC1Q6TDU7 716 aa14.91□□□□□ -0.02
TCF4-276ENST00000635822 MTUS2Q5JR59 1369 aa14.91□□□□□ -0.02
TCF4-276ENST00000635822 DRC7Q8IY82 874 aa14.89□□□□□ -0.03
TCF4-276ENST00000635822 GOLGA3Q08378 1498 aa14.89□□□□□ -0.03
TCF4-276ENST00000635822 RCAN3Q9UKA8 241 aa14.89□□□□□ -0.03
TCF4-276ENST00000635822 RGL3Q3MIN7 710 aa14.89□□□□□ -0.03
TCF4-276ENST00000635822 ZCCHC6Q5VYS8 1495 aaKnown RBP14.88□□□□□ -0.03
TCF4-276ENST00000635822 CARD11Q9BXL7 1154 aa14.87□□□□□ -0.03
TCF4-276ENST00000635822 KNSTRNQ9Y448 316 aa14.86□□□□□ -0.03
TCF4-276ENST00000635822 GBP4Q96PP9 640 aa14.86□□□□□ -0.03
TCF4-276ENST00000635822 KIAA2012Q0VF49 1180 aa14.86□□□□□ -0.03
TCF4-276ENST00000635822 SENP3Q9H4L4 574 aaPredicted RBP14.85□□□□□ -0.03
TCF4-276ENST00000635822 TAOK2Q9UL54 1235 aa14.84□□□□□ -0.03
TCF4-276ENST00000635822 BRPF3Q9ULD4 1205 aa14.84□□□□□ -0.03
TCF4-276ENST00000635822 BAZ1BQ9UIG0 1483 aaKnown RBP14.84□□□□□ -0.03
TCF4-276ENST00000635822 PODXL2Q9NZ53 605 aa14.84□□□□□ -0.03
TCF4-276ENST00000635822 PDE4AP27815 886 aa14.84□□□□□ -0.03
TCF4-276ENST00000635822 HSPA5P11021 654 aaKnown RBP14.83□□□□□ -0.03
TCF4-276ENST00000635822 TNIKQ9UKE5 1360 aa14.83□□□□□ -0.03
TCF4-276ENST00000635822 ABCC9O60706 1549 aa14.83□□□□□ -0.04
TCF4-276ENST00000635822 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
TCF4-276ENST00000635822 FAM13BQ9NYF5 915 aa14.82□□□□□ -0.04
TCF4-276ENST00000635822 NUDCQ9Y266 331 aa14.81□□□□□ -0.04
TCF4-276ENST00000635822 GOLGA6L6A8MZA4 724 aa14.79□□□□□ -0.04
TCF4-276ENST00000635822 MFAP1P55081 439 aaKnown RBP14.79□□□□□ -0.04
TCF4-276ENST00000635822 CCNB3Q8WWL7 1395 aa14.76□□□□□ -0.05
TCF4-276ENST00000635822 GOLGA6L4A6NEF3 574 aa14.76□□□□□ -0.05
TCF4-276ENST00000635822 PAK3O75914 559 aaPredicted RBP14.75□□□□□ -0.05
TCF4-276ENST00000635822 NRDCO43847 1150 aa14.74□□□□□ -0.05
TCF4-276ENST00000635822 CALD1Q05682 793 aaKnown RBP14.73□□□□□ -0.05
TCF4-276ENST00000635822 PTMSP20962 102 aa14.73□□□□□ -0.05
TCF4-276ENST00000635822 ZNF771Q7L3S4 317 aaPredicted RBP14.73□□□□□ -0.05
TCF4-276ENST00000635822 TSPY4P0CV99 314 aa14.72□□□□□ -0.05
TCF4-276ENST00000635822 TSPY10P0CW01 314 aa14.72□□□□□ -0.05
TCF4-276ENST00000635822 NFKBIBQ15653 356 aa14.72□□□□□ -0.05
TCF4-276ENST00000635822 CFAP53Q96M91 514 aa14.72□□□□□ -0.05
TCF4-276ENST00000635822 PLIN1O60240 522 aa14.71□□□□□ -0.05
TCF4-276ENST00000635822 EXOC6Q8TAG9 804 aa14.7□□□□□ -0.06
TCF4-276ENST00000635822 STAG3Q9UJ98 1225 aa14.69□□□□□ -0.06
TCF4-276ENST00000635822 FOXD4L5Q5VV16 416 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms