RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 CEP170Q5SW79 1584 aa31.77■■■□□ 2.68
CLN8-208ENST00000635751 NUP160Q12769 1436 aa31.71■■■□□ 2.67
CLN8-208ENST00000635751 RANGAP1P46060 587 aaPredicted RBP31.7■■■□□ 2.66
CLN8-208ENST00000635751 KIAA0586Q9BVV6 1533 aa31.65■■■□□ 2.66
CLN8-208ENST00000635751 CEP162Q5TB80 1403 aa31.64■■■□□ 2.66
CLN8-208ENST00000635751 IQGAP2Q13576 1575 aa31.64■■■□□ 2.66
CLN8-208ENST00000635751 CLIP1P30622 1438 aa31.56■■■□□ 2.64
CLN8-208ENST00000635751 PCGF6Q9BYE7 350 aa31.52■■■□□ 2.64
CLN8-208ENST00000635751 OSCARQ8IYS5 282 aa31.52■■■□□ 2.64
CLN8-208ENST00000635751 CLASP1Q7Z460 1538 aa31.49■■■□□ 2.63
CLN8-208ENST00000635751 JPH4Q96JJ6 628 aa31.47■■■□□ 2.63
CLN8-208ENST00000635751 UGGT2Q9NYU1 1516 aa31.47■■■□□ 2.63
CLN8-208ENST00000635751 ARHGAP35Q9NRY4 1499 aa31.46■■■□□ 2.63
CLN8-208ENST00000635751 P3H3Q8IVL6 736 aa31.42■■■□□ 2.62
CLN8-208ENST00000635751 SAMD9Q5K651 1589 aa31.42■■■□□ 2.62
CLN8-208ENST00000635751 EFCAB5A4FU69 1503 aa31.41■■■□□ 2.62
CLN8-208ENST00000635751 SHROOM2Q13796 1616 aa31.4■■■□□ 2.62
CLN8-208ENST00000635751 HRCP23327 699 aa31.36■■■□□ 2.61
CLN8-208ENST00000635751 DISP1Q96F81 1524 aa31.35■■■□□ 2.61
CLN8-208ENST00000635751 ARAP1Q96P48 1450 aa31.34■■■□□ 2.61
CLN8-208ENST00000635751 KIAA0556O60303 1618 aa31.33■■■□□ 2.61
CLN8-208ENST00000635751 PRG4Q92954 1404 aaPredicted RBP31.32■■■□□ 2.6
CLN8-208ENST00000635751 FHOD3Q2V2M9 1422 aa31.31■■■□□ 2.6
CLN8-208ENST00000635751 CARMIL2Q6F5E8 1435 aa31.28■■■□□ 2.6
CLN8-208ENST00000635751 TRIM26Q12899 539 aaPredicted RBP31.24■■■□□ 2.59
CLN8-208ENST00000635751 ERCC6L2Q5T890 1561 aa31.24■■■□□ 2.59
CLN8-208ENST00000635751 TTBK1Q5TCY1 1321 aaPredicted RBP31.19■■■□□ 2.58
CLN8-208ENST00000635751 VPS8Q8N3P4 1428 aa31.18■■■□□ 2.58
CLN8-208ENST00000635751 FMN1Q68DA7 1419 aa31.12■■■□□ 2.57
CLN8-208ENST00000635751 PTPRGP23470 1445 aa31.05■■■□□ 2.56
CLN8-208ENST00000635751 PCF11O94913 1555 aaKnown RBP31.04■■■□□ 2.56
CLN8-208ENST00000635751 ATP1B4Q9UN42 357 aaPredicted RBP31■■■□□ 2.55
CLN8-208ENST00000635751 ARHGEF11O15085 1522 aa30.99■■■□□ 2.55
CLN8-208ENST00000635751 CASKIN1Q8WXD9 1431 aa30.99■■■□□ 2.55
CLN8-208ENST00000635751 PLB1Q6P1J6 1458 aa30.96■■■□□ 2.55
CLN8-208ENST00000635751 RAPGEF6Q8TEU7 1601 aa30.96■■■□□ 2.55
CLN8-208ENST00000635751 FYCO1Q9BQS8 1478 aa30.96■■■□□ 2.55
CLN8-208ENST00000635751 RIMBP3CA6NJZ7 1639 aa30.93■■■□□ 2.54
CLN8-208ENST00000635751 RIMBP3BA6NNM3 1639 aa30.93■■■□□ 2.54
CLN8-208ENST00000635751 RIMBP3Q9UFD9 1639 aa30.93■■■□□ 2.54
CLN8-208ENST00000635751 LRRIQ1Q96JM4 1722 aa30.92■■■□□ 2.54
CLN8-208ENST00000635751 ABCA8O94911 1581 aa30.91■■■□□ 2.54
CLN8-208ENST00000635751 HECW1Q76N89 1606 aa30.89■■■□□ 2.54
CLN8-208ENST00000635751 APLP2Q06481 763 aa30.87■■■□□ 2.53
CLN8-208ENST00000635751 UACAQ9BZF9 1416 aa30.86■■■□□ 2.53
CLN8-208ENST00000635751 NUP153P49790 1475 aaKnown RBP30.84■■■□□ 2.53
CLN8-208ENST00000635751 ARID3CA6NKF2 412 aa30.82■■■□□ 2.52
CLN8-208ENST00000635751 PPARGC1BQ86YN6 1023 aaKnown RBP30.79■■■□□ 2.52
CLN8-208ENST00000635751 EPRSP07814 1512 aaKnown RBP30.79■■■□□ 2.52
CLN8-208ENST00000635751 ABCC2Q92887 1545 aa30.78■■■□□ 2.52
CLN8-208ENST00000635751 TIAM1Q13009 1591 aa30.78■■■□□ 2.52
CLN8-208ENST00000635751 CFAP43Q8NDM7 1665 aa30.77■■■□□ 2.52
CLN8-208ENST00000635751 CDK13Q14004 1512 aaKnown RBP30.76■■■□□ 2.51
CLN8-208ENST00000635751 CCDC18Q5T9S5 1454 aa30.74■■■□□ 2.51
CLN8-208ENST00000635751 MAP3K1Q13233 1512 aa30.74■■■□□ 2.51
CLN8-208ENST00000635751 UHRF1BP1LA0JNW5 1464 aa30.74■■■□□ 2.51
CLN8-208ENST00000635751 ADCY10Q96PN6 1610 aa30.74■■■□□ 2.51
CLN8-208ENST00000635751 CYB5RLQ6IPT4 315 aa30.73■■■□□ 2.51
CLN8-208ENST00000635751 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.7■■■□□ 2.51
CLN8-208ENST00000635751 HNRNPUL2Q1KMD3 747 aaKnown RBP30.7■■■□□ 2.51
CLN8-208ENST00000635751 KANK4Q5T7N3 995 aaPredicted RBP30.7■■■□□ 2.5
CLN8-208ENST00000635751 ATP10BO94823 1461 aa30.69■■■□□ 2.5
CLN8-208ENST00000635751 ZCCHC11Q5TAX3 1644 aaKnown RBP30.63■■■□□ 2.49
CLN8-208ENST00000635751 LRRC9Q6ZRR7 1453 aa30.62■■■□□ 2.49
CLN8-208ENST00000635751 KDM5BQ9UGL1 1544 aa30.62■■■□□ 2.49
CLN8-208ENST00000635751 DNAJC5Q9H3Z4 198 aa30.61■■■□□ 2.49
CLN8-208ENST00000635751 MAGI3Q5TCQ9 1506 aa30.59■■■□□ 2.49
CLN8-208ENST00000635751 MTUS2Q5JR59 1369 aa30.57■■■□□ 2.48
CLN8-208ENST00000635751 CDK11AQ9UQ88 783 aaPredicted RBP30.57■■■□□ 2.48
CLN8-208ENST00000635751 PLEKHD1A6NEE1 506 aa30.52■■■□□ 2.48
CLN8-208ENST00000635751 NPM1P06748 294 aaKnown RBP eCLIP30.52■■■□□ 2.48
CLN8-208ENST00000635751 EHBP1L1Q8N3D4 1523 aa30.51■■■□□ 2.48
CLN8-208ENST00000635751 ZEB1P37275 1124 aaPredicted RBP30.47■■■□□ 2.47
CLN8-208ENST00000635751 TROQ12816 1431 aaPredicted RBP30.46■■■□□ 2.47
CLN8-208ENST00000635751 SUPT6HQ7KZ85 1726 aaKnown RBP30.45■■■□□ 2.47
CLN8-208ENST00000635751 KIF14Q15058 1648 aa30.39■■■□□ 2.46
CLN8-208ENST00000635751 NCOA2Q15596 1464 aa30.38■■■□□ 2.45
CLN8-208ENST00000635751 ASXL2Q76L83 1435 aa30.37■■■□□ 2.45
CLN8-208ENST00000635751 KCNH8Q96L42 1107 aa30.36■■■□□ 2.45
CLN8-208ENST00000635751 WDR7Q9Y4E6 1490 aa30.35■■■□□ 2.45
CLN8-208ENST00000635751 PHLDB1Q86UU1 1377 aa30.31■■■□□ 2.44
CLN8-208ENST00000635751 MAPKBP1O60336 1514 aa30.29■■■□□ 2.44
CLN8-208ENST00000635751 ABCC10Q5T3U5 1492 aa30.24■■■□□ 2.43
CLN8-208ENST00000635751 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.24■■■□□ 2.435e-6■□□□□ 9.5
CLN8-208ENST00000635751 TTC37Q6PGP7 1564 aa30.22■■■□□ 2.43
CLN8-208ENST00000635751 CCNB3Q8WWL7 1395 aa30.21■■■□□ 2.43
CLN8-208ENST00000635751 CDC42BPAQ5VT25 1732 aa30.21■■■□□ 2.43
CLN8-208ENST00000635751 MYOM3Q5VTT5 1437 aa30.2■■■□□ 2.42
CLN8-208ENST00000635751 ITSN2Q9NZM3 1697 aa30.16■■■□□ 2.42
CLN8-208ENST00000635751 GPATCH8Q9UKJ3 1502 aaKnown RBP30.16■■■□□ 2.42
CLN8-208ENST00000635751 MYO5CQ9NQX4 1742 aa30.15■■■□□ 2.42
CLN8-208ENST00000635751 ABCA9Q8IUA7 1624 aa30.14■■■□□ 2.42
CLN8-208ENST00000635751 FGD6Q6ZV73 1430 aa30.13■■■□□ 2.41
CLN8-208ENST00000635751 RRBP1Q9P2E9 1410 aaKnown RBP30.13■■■□□ 2.41
CLN8-208ENST00000635751 CDC42BPBQ9Y5S2 1711 aa30.13■■■□□ 2.41
CLN8-208ENST00000635751 PREX2Q70Z35 1606 aa30.1■■■□□ 2.41
CLN8-208ENST00000635751 CFDP1Q9UEE9 299 aaPredicted RBP30.08■■■□□ 2.41
CLN8-208ENST00000635751 MIA2Q96PC5 1412 aa30.07■■■□□ 2.4
CLN8-208ENST00000635751 PTPN23Q9H3S7 1636 aa30.07■■■□□ 2.4
CLN8-208ENST00000635751 DIP2BQ9P265 1576 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms