RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 MAGI1Q96QZ7 1491 aaPredicted RBP15.74■□□□□ 0.11
CACNA1A-216ENST00000635742 GRIN2AQ12879 1464 aa15.7■□□□□ 0.1
CACNA1A-216ENST00000635742 EFCAB5A4FU69 1503 aa15.69■□□□□ 0.1
CACNA1A-216ENST00000635742 SYNJ2O15056 1496 aa15.68■□□□□ 0.1
CACNA1A-216ENST00000635742 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-216ENST00000635742 IQGAP2Q13576 1575 aa15.67■□□□□ 0.1
CACNA1A-216ENST00000635742 SAMD9Q5K651 1589 aa15.66■□□□□ 0.1
CACNA1A-216ENST00000635742 FHOD3Q2V2M9 1422 aa15.63■□□□□ 0.09
CACNA1A-216ENST00000635742 PCGF6Q9BYE7 350 aa15.63■□□□□ 0.09
CACNA1A-216ENST00000635742 CEP170Q5SW79 1584 aa15.63■□□□□ 0.09
CACNA1A-216ENST00000635742 TRIM26Q12899 539 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-216ENST00000635742 P3H3Q8IVL6 736 aa15.6■□□□□ 0.09
CACNA1A-216ENST00000635742 KIAA0586Q9BVV6 1533 aa15.59■□□□□ 0.09
CACNA1A-216ENST00000635742 PCF11O94913 1555 aaKnown RBP15.59■□□□□ 0.09
CACNA1A-216ENST00000635742 CHMP7Q8WUX9 453 aaPredicted RBP15.59■□□□□ 0.09
CACNA1A-216ENST00000635742 CHD1O14646 1710 aa15.59■□□□□ 0.09
CACNA1A-216ENST00000635742 NUP160Q12769 1436 aa15.58■□□□□ 0.08
CACNA1A-216ENST00000635742 UGGT2Q9NYU1 1516 aa15.58■□□□□ 0.08
CACNA1A-216ENST00000635742 TTBK1Q5TCY1 1321 aaPredicted RBP15.57■□□□□ 0.08
CACNA1A-216ENST00000635742 FBLN2P98095 1184 aa15.56■□□□□ 0.08
CACNA1A-216ENST00000635742 KIAA0556O60303 1618 aa15.52■□□□□ 0.08
CACNA1A-216ENST00000635742 APLP2Q06481 763 aa15.52■□□□□ 0.07
CACNA1A-216ENST00000635742 DISP1Q96F81 1524 aa15.51■□□□□ 0.07
CACNA1A-216ENST00000635742 FYCO1Q9BQS8 1478 aa15.51■□□□□ 0.07
CACNA1A-216ENST00000635742 FMN1Q68DA7 1419 aa15.51■□□□□ 0.07
CACNA1A-216ENST00000635742 CFAP43Q8NDM7 1665 aa15.51■□□□□ 0.07
CACNA1A-216ENST00000635742 TIAM1Q13009 1591 aa15.51■□□□□ 0.07
CACNA1A-216ENST00000635742 CASKIN1Q8WXD9 1431 aa15.5■□□□□ 0.07
CACNA1A-216ENST00000635742 MAP3K1Q13233 1512 aa15.47■□□□□ 0.07
CACNA1A-216ENST00000635742 LRRIQ1Q96JM4 1722 aa15.47■□□□□ 0.07
CACNA1A-216ENST00000635742 KANK4Q5T7N3 995 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-216ENST00000635742 HECW1Q76N89 1606 aa15.41■□□□□ 0.06
CACNA1A-216ENST00000635742 LRRC9Q6ZRR7 1453 aa15.41■□□□□ 0.06
CACNA1A-216ENST00000635742 ATP1B4Q9UN42 357 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-216ENST00000635742 SHROOM2Q13796 1616 aa15.39■□□□□ 0.05
CACNA1A-216ENST00000635742 JPH4Q96JJ6 628 aa15.39■□□□□ 0.05
CACNA1A-216ENST00000635742 CLASP1Q7Z460 1538 aa15.38■□□□□ 0.05
CACNA1A-216ENST00000635742 CARMIL2Q6F5E8 1435 aa15.37■□□□□ 0.05
CACNA1A-216ENST00000635742 RAPGEF6Q8TEU7 1601 aa15.36■□□□□ 0.05
CACNA1A-216ENST00000635742 PRG4Q92954 1404 aaPredicted RBP15.34■□□□□ 0.05
CACNA1A-216ENST00000635742 CCDC18Q5T9S5 1454 aa15.34■□□□□ 0.05
CACNA1A-216ENST00000635742 EPRSP07814 1512 aaKnown RBP15.33■□□□□ 0.04
CACNA1A-216ENST00000635742 CDK13Q14004 1512 aaKnown RBP15.33■□□□□ 0.04
CACNA1A-216ENST00000635742 NUP153P49790 1475 aaKnown RBP15.32■□□□□ 0.04
CACNA1A-216ENST00000635742 MAGI3Q5TCQ9 1506 aa15.31■□□□□ 0.04
CACNA1A-216ENST00000635742 PLB1Q6P1J6 1458 aa15.31■□□□□ 0.04
CACNA1A-216ENST00000635742 ERCC6L2Q5T890 1561 aa15.31■□□□□ 0.04
CACNA1A-216ENST00000635742 EHBP1L1Q8N3D4 1523 aa15.3■□□□□ 0.04
CACNA1A-216ENST00000635742 RRBP1Q9P2E9 1410 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-216ENST00000635742 ABCA8O94911 1581 aa15.29■□□□□ 0.04
CACNA1A-216ENST00000635742 PHLDB1Q86UU1 1377 aa15.27■□□□□ 0.04
CACNA1A-216ENST00000635742 MTUS2Q5JR59 1369 aa15.27■□□□□ 0.03
CACNA1A-216ENST00000635742 SUPT6HQ7KZ85 1726 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-216ENST00000635742 ARID3CA6NKF2 412 aa15.25■□□□□ 0.03
CACNA1A-216ENST00000635742 PTPRGP23470 1445 aa15.23■□□□□ 0.03
CACNA1A-216ENST00000635742 CCNB3Q8WWL7 1395 aa15.23■□□□□ 0.03
CACNA1A-216ENST00000635742 NCOA2Q15596 1464 aa15.22■□□□□ 0.03
CACNA1A-216ENST00000635742 ARHGEF11O15085 1522 aa15.22■□□□□ 0.03
CACNA1A-216ENST00000635742 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-216ENST00000635742 HRCP23327 699 aa15.16■□□□□ 0.02
CACNA1A-216ENST00000635742 FGD6Q6ZV73 1430 aa15.16■□□□□ 0.02
CACNA1A-216ENST00000635742 UACAQ9BZF9 1416 aa15.16■□□□□ 0.02
CACNA1A-216ENST00000635742 ATP10BO94823 1461 aa15.15■□□□□ 0.02
CACNA1A-216ENST00000635742 MYOM3Q5VTT5 1437 aa15.15■□□□□ 0.02
CACNA1A-216ENST00000635742 ABCC2Q92887 1545 aa15.15■□□□□ 0.02
CACNA1A-216ENST00000635742 ADCY10Q96PN6 1610 aa15.14■□□□□ 0.01
CACNA1A-216ENST00000635742 TROQ12816 1431 aaPredicted RBP15.14■□□□□ 0.01
CACNA1A-216ENST00000635742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.13■□□□□ 0.01
CACNA1A-216ENST00000635742 KIF14Q15058 1648 aa15.13■□□□□ 0.01
CACNA1A-216ENST00000635742 OSCARQ8IYS5 282 aa15.13■□□□□ 0.01
CACNA1A-216ENST00000635742 PTPN23Q9H3S7 1636 aa15.1■□□□□ 0.01
CACNA1A-216ENST00000635742 CDK11AQ9UQ88 783 aaPredicted RBP15.1■□□□□ 0.01
CACNA1A-216ENST00000635742 FAM50AQ14320 339 aaKnown RBP15.09■□□□□ 0.01
CACNA1A-216ENST00000635742 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.08■□□□□ 0.01
CACNA1A-216ENST00000635742 UHRF1BP1LA0JNW5 1464 aa15.08■□□□□ 0
CACNA1A-216ENST00000635742 ITGAEP38570 1179 aa15.07■□□□□ 0
CACNA1A-216ENST00000635742 ZCCHC11Q5TAX3 1644 aaKnown RBP15.07■□□□□ 0
CACNA1A-216ENST00000635742 TCOF1Q13428 1488 aaKnown RBP15.06■□□□□ 0
CACNA1A-216ENST00000635742 ITSN2Q9NZM3 1697 aa15.05■□□□□ 0
CACNA1A-216ENST00000635742 MIA2Q96PC5 1412 aa15.04■□□□□ -0
CACNA1A-216ENST00000635742 KDM5BQ9UGL1 1544 aa15.03■□□□□ -0
CACNA1A-216ENST00000635742 ABCC10Q5T3U5 1492 aa15.03■□□□□ -0
CACNA1A-216ENST00000635742 PLEKHD1A6NEE1 506 aa15.03■□□□□ -0
CACNA1A-216ENST00000635742 CDC42BPAQ5VT25 1732 aa15.02■□□□□ -0
CACNA1A-216ENST00000635742 GPATCH8Q9UKJ3 1502 aaKnown RBP15.01□□□□□ -0.01
CACNA1A-216ENST00000635742 PTPRKQ15262 1439 aa15.01□□□□□ -0.01
CACNA1A-216ENST00000635742 SLC24A1O60721 1099 aa15□□□□□ -0.01
CACNA1A-216ENST00000635742 CCER1Q8TC90 406 aaPredicted RBP15□□□□□ -0.01
CACNA1A-216ENST00000635742 TTC37Q6PGP7 1564 aa14.98□□□□□ -0.01
CACNA1A-216ENST00000635742 CAMSAP2Q08AD1 1489 aa14.97□□□□□ -0.01
CACNA1A-216ENST00000635742 DNMT1P26358 1616 aaKnown RBP14.96□□□□□ -0.02
CACNA1A-216ENST00000635742 PREX2Q70Z35 1606 aa14.96□□□□□ -0.02
CACNA1A-216ENST00000635742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.95□□□□□ -0.02
CACNA1A-216ENST00000635742 RAB3GAP2Q9H2M9 1393 aa14.95□□□□□ -0.02
CACNA1A-216ENST00000635742 SETD5Q9C0A6 1442 aa14.94□□□□□ -0.02
CACNA1A-216ENST00000635742 ZNF644Q9H582 1327 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-216ENST00000635742 CDC42BPBQ9Y5S2 1711 aa14.94□□□□□ -0.02
CACNA1A-216ENST00000635742 ZEB1P37275 1124 aaPredicted RBP14.93□□□□□ -0.02
CACNA1A-216ENST00000635742 CFDP1Q9UEE9 299 aaPredicted RBP14.92□□□□□ -0.02
CACNA1A-216ENST00000635742 DAPK1P53355 1430 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms