RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 PDS5BQ9NTI5 1447 aa18.76■□□□□ 0.59
PTPN11-205ENST00000635625 IGF1RP08069 1367 aa18.76■□□□□ 0.59
PTPN11-205ENST00000635625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.75■□□□□ 0.59
PTPN11-205ENST00000635625 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
PTPN11-205ENST00000635625 THOC2Q8NI27 1593 aaKnown RBP18.73■□□□□ 0.59
PTPN11-205ENST00000635625 CUL7Q14999 1698 aa18.73■□□□□ 0.59
PTPN11-205ENST00000635625 TOPBP1Q92547 1522 aa18.72■□□□□ 0.59
PTPN11-205ENST00000635625 ARHGAP35Q9NRY4 1499 aa18.71■□□□□ 0.59
PTPN11-205ENST00000635625 MAP3K1Q13233 1512 aa18.71■□□□□ 0.59
PTPN11-205ENST00000635625 CARMIL1Q5VZK9 1371 aa18.7■□□□□ 0.58
PTPN11-205ENST00000635625 TTBK1Q5TCY1 1321 aaPredicted RBP18.69■□□□□ 0.58
PTPN11-205ENST00000635625 WDR97A6NE52 1622 aa18.67■□□□□ 0.58
PTPN11-205ENST00000635625 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
PTPN11-205ENST00000635625 EFCAB5A4FU69 1503 aa18.62■□□□□ 0.57
PTPN11-205ENST00000635625 RRBP1Q9P2E9 1410 aaKnown RBP18.61■□□□□ 0.57
PTPN11-205ENST00000635625 MRC2Q9UBG0 1479 aa18.6■□□□□ 0.57
PTPN11-205ENST00000635625 CTTNBP2Q8WZ74 1663 aa18.59■□□□□ 0.57
PTPN11-205ENST00000635625 FHAD1B1AJZ9 1412 aa18.59■□□□□ 0.57
PTPN11-205ENST00000635625 TIAM1Q13009 1591 aa18.57■□□□□ 0.56
PTPN11-205ENST00000635625 ABCA5Q8WWZ7 1642 aa18.56■□□□□ 0.56
PTPN11-205ENST00000635625 CFAP43Q8NDM7 1665 aa18.56■□□□□ 0.56
PTPN11-205ENST00000635625 URB2Q14146 1524 aaKnown RBP18.56■□□□□ 0.56
PTPN11-205ENST00000635625 RANGAP1P46060 587 aaPredicted RBP18.55■□□□□ 0.56
PTPN11-205ENST00000635625 CLSPNQ9HAW4 1339 aa18.55■□□□□ 0.56
PTPN11-205ENST00000635625 RAD54L2Q9Y4B4 1467 aa18.54■□□□□ 0.56
PTPN11-205ENST00000635625 WDR62O43379 1518 aa18.54■□□□□ 0.56
PTPN11-205ENST00000635625 AQRO60306 1485 aaKnown RBP eCLIP18.51■□□□□ 0.553e-6■■■■□ 22.1
PTPN11-205ENST00000635625 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
PTPN11-205ENST00000635625 FYCO1Q9BQS8 1478 aa18.48■□□□□ 0.55
PTPN11-205ENST00000635625 CCNB3Q8WWL7 1395 aa18.46■□□□□ 0.55
PTPN11-205ENST00000635625 KANK4Q5T7N3 995 aaPredicted RBP18.45■□□□□ 0.54
PTPN11-205ENST00000635625 PCF11O94913 1555 aaKnown RBP18.45■□□□□ 0.54
PTPN11-205ENST00000635625 LRRC9Q6ZRR7 1453 aa18.44■□□□□ 0.54
PTPN11-205ENST00000635625 GAPVD1Q14C86 1478 aa18.43■□□□□ 0.54
PTPN11-205ENST00000635625 TARBP1Q13395 1621 aaKnown RBP18.42■□□□□ 0.54
PTPN11-205ENST00000635625 CASKIN1Q8WXD9 1431 aa18.41■□□□□ 0.54
PTPN11-205ENST00000635625 SLC4A2P04920 1241 aa18.41■□□□□ 0.54
PTPN11-205ENST00000635625 SAMD9Q5K651 1589 aa18.4■□□□□ 0.54
PTPN11-205ENST00000635625 FMN1Q68DA7 1419 aa18.4■□□□□ 0.54
PTPN11-205ENST00000635625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.4■□□□□ 0.549e-7■■□□□ 14.4
PTPN11-205ENST00000635625 PBRM1Q86U86 1689 aa18.36■□□□□ 0.53
PTPN11-205ENST00000635625 DNAJC5Q9H3Z4 198 aa18.35■□□□□ 0.53
PTPN11-205ENST00000635625 ZNF316A6NFI3 1004 aaPredicted RBP18.34■□□□□ 0.53
PTPN11-205ENST00000635625 DHX57Q6P158 1386 aaKnown RBP18.34■□□□□ 0.53
PTPN11-205ENST00000635625 DIEXFQ68CQ4 756 aaKnown RBP18.33■□□□□ 0.53
PTPN11-205ENST00000635625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.32■□□□□ 0.52
PTPN11-205ENST00000635625 FHOD3Q2V2M9 1422 aa18.32■□□□□ 0.52
PTPN11-205ENST00000635625 SNAPC4Q5SXM2 1469 aa18.3■□□□□ 0.52
PTPN11-205ENST00000635625 TDRD9Q8NDG6 1382 aaKnown RBP18.28■□□□□ 0.52
PTPN11-205ENST00000635625 FOXD4L1Q9NU39 408 aa18.28■□□□□ 0.52
PTPN11-205ENST00000635625 ADAMTS12P58397 1594 aa18.27■□□□□ 0.52
PTPN11-205ENST00000635625 ZBTB22O15209 634 aa18.25■□□□□ 0.51
PTPN11-205ENST00000635625 PHLDB1Q86UU1 1377 aa18.24■□□□□ 0.51
PTPN11-205ENST00000635625 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
PTPN11-205ENST00000635625 IFT140Q96RY7 1462 aa18.22■□□□□ 0.51
PTPN11-205ENST00000635625 GRIN2BQ13224 1484 aa18.22■□□□□ 0.51
PTPN11-205ENST00000635625 CCDC18Q5T9S5 1454 aa18.21■□□□□ 0.5
PTPN11-205ENST00000635625 SETD5Q9C0A6 1442 aa18.2■□□□□ 0.5
PTPN11-205ENST00000635625 IQGAP2Q13576 1575 aa18.2■□□□□ 0.5
PTPN11-205ENST00000635625 EHBP1L1Q8N3D4 1523 aa18.2■□□□□ 0.5
PTPN11-205ENST00000635625 SUPT6HQ7KZ85 1726 aaKnown RBP18.17■□□□□ 0.5
PTPN11-205ENST00000635625 HECW1Q76N89 1606 aa18.17■□□□□ 0.5
PTPN11-205ENST00000635625 LRRIQ1Q96JM4 1722 aa18.17■□□□□ 0.5
PTPN11-205ENST00000635625 RAB3GAP2Q9H2M9 1393 aa18.16■□□□□ 0.5
PTPN11-205ENST00000635625 P3H3Q8IVL6 736 aa18.15■□□□□ 0.5
PTPN11-205ENST00000635625 RNF39Q9H2S5 420 aa18.14■□□□□ 0.49
PTPN11-205ENST00000635625 FGD6Q6ZV73 1430 aa18.14■□□□□ 0.49
PTPN11-205ENST00000635625 UGGT2Q9NYU1 1516 aa18.13■□□□□ 0.49
PTPN11-205ENST00000635625 MTUS2Q5JR59 1369 aa18.12■□□□□ 0.49
PTPN11-205ENST00000635625 CENPBP07199 599 aaPredicted RBP18.11■□□□□ 0.49
PTPN11-205ENST00000635625 U3KPZ7 1027 aaPredicted RBP18.11■□□□□ 0.49
PTPN11-205ENST00000635625 MAPKBP1O60336 1514 aa18.11■□□□□ 0.49
PTPN11-205ENST00000635625 EIF4G3O43432 1585 aaKnown RBP18.1■□□□□ 0.49
PTPN11-205ENST00000635625 ARHGEF11O15085 1522 aa18.09■□□□□ 0.49
PTPN11-205ENST00000635625 MYOM3Q5VTT5 1437 aa18.08■□□□□ 0.48
PTPN11-205ENST00000635625 ATP1B4Q9UN42 357 aaPredicted RBP18.07■□□□□ 0.48
PTPN11-205ENST00000635625 NCOA2Q15596 1464 aa18.07■□□□□ 0.48
PTPN11-205ENST00000635625 FAM50AQ14320 339 aaKnown RBP18.06■□□□□ 0.48
PTPN11-205ENST00000635625 KIAA0586Q9BVV6 1533 aa18.04■□□□□ 0.48
PTPN11-205ENST00000635625 MYCNP04198 464 aaPredicted RBP18.04■□□□□ 0.48
PTPN11-205ENST00000635625 ITGAEP38570 1179 aa18.04■□□□□ 0.48
PTPN11-205ENST00000635625 TIMELESSQ9UNS1 1208 aa18.04■□□□□ 0.48
PTPN11-205ENST00000635625 MAGI1Q96QZ7 1491 aaPredicted RBP18.03■□□□□ 0.48
PTPN11-205ENST00000635625 ACIN1Q9UKV3 1341 aaKnown RBP18.02■□□□□ 0.48
PTPN11-205ENST00000635625 PTPN23Q9H3S7 1636 aa18.01■□□□□ 0.47
PTPN11-205ENST00000635625 HFM1A2PYH4 1435 aa18.01■□□□□ 0.47
PTPN11-205ENST00000635625 KIAA0556O60303 1618 aa18.01■□□□□ 0.47
PTPN11-205ENST00000635625 TCOF1Q13428 1488 aaKnown RBP18.01■□□□□ 0.47
PTPN11-205ENST00000635625 EPRSP07814 1512 aaKnown RBP18■□□□□ 0.47
PTPN11-205ENST00000635625 OSCARQ8IYS5 282 aa17.99■□□□□ 0.47
PTPN11-205ENST00000635625 GRIN2AQ12879 1464 aa17.99■□□□□ 0.47
PTPN11-205ENST00000635625 AKNAQ7Z591 1439 aa17.98■□□□□ 0.47
PTPN11-205ENST00000635625 MIA2Q96PC5 1412 aa17.96■□□□□ 0.47
PTPN11-205ENST00000635625 MAGI3Q5TCQ9 1506 aa17.96■□□□□ 0.47
PTPN11-205ENST00000635625 GCC2Q8IWJ2 1684 aa17.96■□□□□ 0.47
PTPN11-205ENST00000635625 UACAQ9BZF9 1416 aa17.94■□□□□ 0.46
PTPN11-205ENST00000635625 DISP1Q96F81 1524 aa17.93■□□□□ 0.46
PTPN11-205ENST00000635625 SYNJ2O15056 1496 aa17.93■□□□□ 0.46
PTPN11-205ENST00000635625 FBLN2P98095 1184 aa17.92■□□□□ 0.46
PTPN11-205ENST00000635625 C1QBPQ07021 282 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms