RNA–Protein interactions for RNA: ENST00000635058.2

RHOXF1P3-201, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

BASIC

Gene RHOXF1P3, Length 502 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-201ENST00000635058 SHROOM2Q13796 1616 aa17.21■□□□□ 0.35
RHOXF1P3-201ENST00000635058 KIAA0586Q9BVV6 1533 aa17.16■□□□□ 0.34
RHOXF1P3-201ENST00000635058 CARMIL1Q5VZK9 1371 aa17.16■□□□□ 0.34
RHOXF1P3-201ENST00000635058 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
RHOXF1P3-201ENST00000635058 CUL7Q14999 1698 aa17.1■□□□□ 0.33
RHOXF1P3-201ENST00000635058 FAM69CQ0P6D2 419 aa17.09■□□□□ 0.33
RHOXF1P3-201ENST00000635058 AEBP2Q6ZN18 517 aaPredicted RBP17.09■□□□□ 0.33
RHOXF1P3-201ENST00000635058 TTBK1Q5TCY1 1321 aaPredicted RBP17.07■□□□□ 0.32
RHOXF1P3-201ENST00000635058 PTPRGP23470 1445 aa17.05■□□□□ 0.32
RHOXF1P3-201ENST00000635058 CARMIL2Q6F5E8 1435 aa17.05■□□□□ 0.32
RHOXF1P3-201ENST00000635058 TNIKQ9UKE5 1360 aa17.01■□□□□ 0.31
RHOXF1P3-201ENST00000635058 ABCC10Q5T3U5 1492 aa16.99■□□□□ 0.31
RHOXF1P3-201ENST00000635058 RAPGEF2Q9Y4G8 1499 aa16.98■□□□□ 0.31
RHOXF1P3-201ENST00000635058 MAPKBP1O60336 1514 aa16.96■□□□□ 0.31
RHOXF1P3-201ENST00000635058 ADCY10Q96PN6 1610 aa16.94■□□□□ 0.3
RHOXF1P3-201ENST00000635058 IQGAP2Q13576 1575 aa16.94■□□□□ 0.3
RHOXF1P3-201ENST00000635058 FAM9AQ8IZU1 332 aaPredicted RBP16.89■□□□□ 0.29
RHOXF1P3-201ENST00000635058 KIF13AQ9H1H9 1805 aa16.89■□□□□ 0.29
RHOXF1P3-201ENST00000635058 UACAQ9BZF9 1416 aa16.88■□□□□ 0.29
RHOXF1P3-201ENST00000635058 ABCC2Q92887 1545 aa16.88■□□□□ 0.29
RHOXF1P3-201ENST00000635058 PLB1Q6P1J6 1458 aa16.86■□□□□ 0.29
RHOXF1P3-201ENST00000635058 DISP1Q96F81 1524 aa16.86■□□□□ 0.29
RHOXF1P3-201ENST00000635058 DIP2BQ9P265 1576 aa16.85■□□□□ 0.29
RHOXF1P3-201ENST00000635058 UHRF1BP1LA0JNW5 1464 aa16.85■□□□□ 0.29
RHOXF1P3-201ENST00000635058 ASXL2Q76L83 1435 aa16.84■□□□□ 0.29
RHOXF1P3-201ENST00000635058 UGGT2Q9NYU1 1516 aa16.84■□□□□ 0.29
RHOXF1P3-201ENST00000635058 GOLGA3Q08378 1498 aa16.8■□□□□ 0.28
RHOXF1P3-201ENST00000635058 CSRNP3Q8WYN3 585 aa16.78■□□□□ 0.28
RHOXF1P3-201ENST00000635058 PRXQ9BXM0 1461 aa16.77■□□□□ 0.28
RHOXF1P3-201ENST00000635058 KDM5BQ9UGL1 1544 aa16.76■□□□□ 0.27
RHOXF1P3-201ENST00000635058 KIAA0556O60303 1618 aa16.75■□□□□ 0.27
RHOXF1P3-201ENST00000635058 KDM6BO15054 1643 aa16.74■□□□□ 0.27
RHOXF1P3-201ENST00000635058 GLI2P10070 1586 aa16.72■□□□□ 0.27
RHOXF1P3-201ENST00000635058 TSPOAP1O95153 1857 aa16.71■□□□□ 0.27
RHOXF1P3-201ENST00000635058 P3H3Q8IVL6 736 aa16.71■□□□□ 0.27
RHOXF1P3-201ENST00000635058 KCNH8Q96L42 1107 aa16.71■□□□□ 0.27
RHOXF1P3-201ENST00000635058 EPRSP07814 1512 aaKnown RBP16.7■□□□□ 0.26
RHOXF1P3-201ENST00000635058 TEX14Q8IWB6 1497 aa16.67■□□□□ 0.26
RHOXF1P3-201ENST00000635058 WDR7Q9Y4E6 1490 aa16.67■□□□□ 0.26
RHOXF1P3-201ENST00000635058 CTTNBP2Q8WZ74 1663 aa16.66■□□□□ 0.26
RHOXF1P3-201ENST00000635058 EEA1Q15075 1411 aa16.65■□□□□ 0.26
RHOXF1P3-201ENST00000635058 ZCCHC11Q5TAX3 1644 aaKnown RBP16.65■□□□□ 0.26
RHOXF1P3-201ENST00000635058 KDM4FA0A1W2PPD8 638 aa16.64■□□□□ 0.25
RHOXF1P3-201ENST00000635058 ARID3CA6NKF2 412 aa16.62■□□□□ 0.25
RHOXF1P3-201ENST00000635058 RANGAP1P46060 587 aaPredicted RBP16.62■□□□□ 0.25
RHOXF1P3-201ENST00000635058 CD109Q6YHK3 1445 aa16.62■□□□□ 0.25
RHOXF1P3-201ENST00000635058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
RHOXF1P3-201ENST00000635058 HNRNPUL2Q1KMD3 747 aaKnown RBP16.61■□□□□ 0.25
RHOXF1P3-201ENST00000635058 ABCA8O94911 1581 aa16.6■□□□□ 0.25
RHOXF1P3-201ENST00000635058 MAP3K4Q9Y6R4 1608 aa16.57■□□□□ 0.24
RHOXF1P3-201ENST00000635058 COL17A1Q9UMD9 1497 aaPredicted RBP16.57■□□□□ 0.24
RHOXF1P3-201ENST00000635058 PPRC1Q5VV67 1664 aaKnown RBP16.56■□□□□ 0.24
RHOXF1P3-201ENST00000635058 MAGI3Q5TCQ9 1506 aa16.55■□□□□ 0.24
RHOXF1P3-201ENST00000635058 ATP10BO94823 1461 aa16.54■□□□□ 0.24
RHOXF1P3-201ENST00000635058 PLEKHD1A6NEE1 506 aa16.51■□□□□ 0.23
RHOXF1P3-201ENST00000635058 UBTFP17480 764 aaKnown RBP16.51■□□□□ 0.23
RHOXF1P3-201ENST00000635058 PHLDB1Q86UU1 1377 aa16.49■□□□□ 0.23
RHOXF1P3-201ENST00000635058 CFAP43Q8NDM7 1665 aa16.48■□□□□ 0.23
RHOXF1P3-201ENST00000635058 SAMD9Q5K651 1589 aa16.47■□□□□ 0.23
RHOXF1P3-201ENST00000635058 CHIC1Q5VXU3 224 aa16.47■□□□□ 0.23
RHOXF1P3-201ENST00000635058 ADGRL1O94910 1474 aa16.47■□□□□ 0.23
RHOXF1P3-201ENST00000635058 FHOD3Q2V2M9 1422 aa16.46■□□□□ 0.23
RHOXF1P3-201ENST00000635058 EHMT2Q96KQ7 1210 aa16.46■□□□□ 0.23
RHOXF1P3-201ENST00000635058 RAPGEF6Q8TEU7 1601 aa16.44■□□□□ 0.22
RHOXF1P3-201ENST00000635058 ATP1B4Q9UN42 357 aaPredicted RBP16.42■□□□□ 0.22
RHOXF1P3-201ENST00000635058 NUP153P49790 1475 aaKnown RBP16.41■□□□□ 0.22
RHOXF1P3-201ENST00000635058 ARAP3Q8WWN8 1544 aa16.4■□□□□ 0.22
RHOXF1P3-201ENST00000635058 RAPGEF3O95398 923 aa16.4■□□□□ 0.22
RHOXF1P3-201ENST00000635058 KIF21BO75037 1637 aa16.39■□□□□ 0.21
RHOXF1P3-201ENST00000635058 EFCAB5A4FU69 1503 aa16.39■□□□□ 0.21
RHOXF1P3-201ENST00000635058 NEO1Q92859 1461 aa16.37■□□□□ 0.21
RHOXF1P3-201ENST00000635058 CDK11AQ9UQ88 783 aaPredicted RBP16.37■□□□□ 0.21
RHOXF1P3-201ENST00000635058 ABCA9Q8IUA7 1624 aa16.37■□□□□ 0.21
RHOXF1P3-201ENST00000635058 ARID4BQ4LE39 1312 aaPredicted RBP16.34■□□□□ 0.21
RHOXF1P3-201ENST00000635058 FMN1Q68DA7 1419 aa16.33■□□□□ 0.2
RHOXF1P3-201ENST00000635058 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
RHOXF1P3-201ENST00000635058 DENND4BO75064 1496 aaPredicted RBP16.29■□□□□ 0.2
RHOXF1P3-201ENST00000635058 FANCAO15360 1455 aa16.28■□□□□ 0.2
RHOXF1P3-201ENST00000635058 EFCAB2Q5VUJ9 269 aa16.26■□□□□ 0.19
RHOXF1P3-201ENST00000635058 ARHGAP35Q9NRY4 1499 aa16.25■□□□□ 0.19
RHOXF1P3-201ENST00000635058 CDK13Q14004 1512 aaKnown RBP16.24■□□□□ 0.19
RHOXF1P3-201ENST00000635058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.24■□□□□ 0.19
RHOXF1P3-201ENST00000635058 PLCH2O75038 1416 aa16.22■□□□□ 0.19
RHOXF1P3-201ENST00000635058 CFAP74Q9C0B2 1584 aa16.2■□□□□ 0.18
RHOXF1P3-201ENST00000635058 CLIP1P30622 1438 aa16.19■□□□□ 0.18
RHOXF1P3-201ENST00000635058 SCAPERQ9BY12 1400 aa16.19■□□□□ 0.18
RHOXF1P3-201ENST00000635058 HECW1Q76N89 1606 aa16.19■□□□□ 0.18
RHOXF1P3-201ENST00000635058 POGZQ7Z3K3 1410 aa16.19■□□□□ 0.18
RHOXF1P3-201ENST00000635058 HECW2Q9P2P5 1572 aa16.18■□□□□ 0.18
RHOXF1P3-201ENST00000635058 PTPRMP28827 1452 aa16.17■□□□□ 0.18
RHOXF1P3-201ENST00000635058 MYT1LQ9UL68 1186 aa16.17■□□□□ 0.18
RHOXF1P3-201ENST00000635058 MAGI2Q86UL8 1455 aa16.16■□□□□ 0.18
RHOXF1P3-201ENST00000635058 TROQ12816 1431 aaPredicted RBP16.16■□□□□ 0.18
RHOXF1P3-201ENST00000635058 TTC37Q6PGP7 1564 aa16.16■□□□□ 0.18
RHOXF1P3-201ENST00000635058 FRMPD1Q5SYB0 1578 aa16.15■□□□□ 0.18
RHOXF1P3-201ENST00000635058 MLECQ14165 292 aa16.14■□□□□ 0.17
RHOXF1P3-201ENST00000635058 ILDR1Q86SU0 546 aaPredicted RBP16.13■□□□□ 0.17
RHOXF1P3-201ENST00000635058 PLPPR3Q6T4P5 718 aa16.12■□□□□ 0.17
RHOXF1P3-201ENST00000635058 ADAMTSL3P82987 1691 aa16.11■□□□□ 0.17
RHOXF1P3-201ENST00000635058 CASKIN1Q8WXD9 1431 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms