RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CEP162Q5TB80 1403 aa19.01■□□□□ 0.63
SYNGAP1-207ENST00000628646 THOC2Q8NI27 1593 aaKnown RBP18.98■□□□□ 0.63
SYNGAP1-207ENST00000628646 KIF21BO75037 1637 aa18.98■□□□□ 0.63
SYNGAP1-207ENST00000628646 MYT1LQ9UL68 1186 aa18.94■□□□□ 0.62
SYNGAP1-207ENST00000628646 CARMIL2Q6F5E8 1435 aa18.94■□□□□ 0.62
SYNGAP1-207ENST00000628646 CDK11AQ9UQ88 783 aaPredicted RBP18.93■□□□□ 0.62
SYNGAP1-207ENST00000628646 CYB5RLQ6IPT4 315 aa18.92■□□□□ 0.62
SYNGAP1-207ENST00000628646 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
SYNGAP1-207ENST00000628646 SYNJ2O15056 1496 aa18.89■□□□□ 0.61
SYNGAP1-207ENST00000628646 ITGAEP38570 1179 aa18.88■□□□□ 0.61
SYNGAP1-207ENST00000628646 EIF4G3O43432 1585 aaKnown RBP18.87■□□□□ 0.61
SYNGAP1-207ENST00000628646 ERICH3Q5RHP9 1530 aa18.87■□□□□ 0.61
SYNGAP1-207ENST00000628646 KCNH8Q96L42 1107 aa18.86■□□□□ 0.61
SYNGAP1-207ENST00000628646 PRXQ9BXM0 1461 aa18.83■□□□□ 0.61
SYNGAP1-207ENST00000628646 GRIN2AQ12879 1464 aa18.82■□□□□ 0.6
SYNGAP1-207ENST00000628646 TARBP1Q13395 1621 aaKnown RBP18.81■□□□□ 0.6
SYNGAP1-207ENST00000628646 FHOD3Q2V2M9 1422 aa18.79■□□□□ 0.6
SYNGAP1-207ENST00000628646 PLEKHD1A6NEE1 506 aa18.79■□□□□ 0.6
SYNGAP1-207ENST00000628646 ZEB1P37275 1124 aaPredicted RBP18.78■□□□□ 0.6
SYNGAP1-207ENST00000628646 ZNF777Q9ULD5 760 aaPredicted RBP18.77■□□□□ 0.6
SYNGAP1-207ENST00000628646 PTPRGP23470 1445 aa18.77■□□□□ 0.6
SYNGAP1-207ENST00000628646 FAM50AQ14320 339 aaKnown RBP18.77■□□□□ 0.6
SYNGAP1-207ENST00000628646 PRG4Q92954 1404 aaPredicted RBP18.77■□□□□ 0.59
SYNGAP1-207ENST00000628646 TRHP20396 242 aaPredicted RBP18.75■□□□□ 0.59
SYNGAP1-207ENST00000628646 CUL7Q14999 1698 aa18.75■□□□□ 0.59
SYNGAP1-207ENST00000628646 MTUS2Q5JR59 1369 aa18.74■□□□□ 0.59
SYNGAP1-207ENST00000628646 KIAA0586Q9BVV6 1533 aa18.71■□□□□ 0.59
SYNGAP1-207ENST00000628646 ABCA5Q8WWZ7 1642 aa18.69■□□□□ 0.58
SYNGAP1-207ENST00000628646 FMN1Q68DA7 1419 aa18.67■□□□□ 0.58
SYNGAP1-207ENST00000628646 ADAMTS12P58397 1594 aa18.67■□□□□ 0.58
SYNGAP1-207ENST00000628646 PBRM1Q86U86 1689 aa18.66■□□□□ 0.58
SYNGAP1-207ENST00000628646 VPS8Q8N3P4 1428 aa18.62■□□□□ 0.57
SYNGAP1-207ENST00000628646 IQGAP2Q13576 1575 aa18.62■□□□□ 0.57
SYNGAP1-207ENST00000628646 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
SYNGAP1-207ENST00000628646 ARAP1Q96P48 1450 aa18.54■□□□□ 0.56
SYNGAP1-207ENST00000628646 ARHGAP35Q9NRY4 1499 aa18.53■□□□□ 0.56
SYNGAP1-207ENST00000628646 NUP160Q12769 1436 aa18.52■□□□□ 0.55
SYNGAP1-207ENST00000628646 CFDP1Q9UEE9 299 aaPredicted RBP18.5■□□□□ 0.55
SYNGAP1-207ENST00000628646 KANK4Q5T7N3 995 aaPredicted RBP18.48■□□□□ 0.55
SYNGAP1-207ENST00000628646 CHD1O14646 1710 aa18.47■□□□□ 0.55
SYNGAP1-207ENST00000628646 EFCAB5A4FU69 1503 aa18.45■□□□□ 0.54
SYNGAP1-207ENST00000628646 CEP170Q5SW79 1584 aa18.45■□□□□ 0.54
SYNGAP1-207ENST00000628646 CHIC2Q9UKJ5 165 aa18.43■□□□□ 0.54
SYNGAP1-207ENST00000628646 CCNB3Q8WWL7 1395 aa18.43■□□□□ 0.54
SYNGAP1-207ENST00000628646 FAM69CQ0P6D2 419 aa18.43■□□□□ 0.54
SYNGAP1-207ENST00000628646 UACAQ9BZF9 1416 aa18.41■□□□□ 0.54
SYNGAP1-207ENST00000628646 TSPY4P0CV99 314 aa18.41■□□□□ 0.54
SYNGAP1-207ENST00000628646 TSPY10P0CW01 314 aa18.41■□□□□ 0.54
SYNGAP1-207ENST00000628646 PLB1Q6P1J6 1458 aa18.4■□□□□ 0.54
SYNGAP1-207ENST00000628646 CCER1Q8TC90 406 aaPredicted RBP18.4■□□□□ 0.54
SYNGAP1-207ENST00000628646 TRIM52Q96A61 297 aa18.37■□□□□ 0.53
SYNGAP1-207ENST00000628646 CTTNBP2Q8WZ74 1663 aa18.36■□□□□ 0.53
SYNGAP1-207ENST00000628646 CASKIN1Q8WXD9 1431 aa18.35■□□□□ 0.53
SYNGAP1-207ENST00000628646 EFCAB2Q5VUJ9 269 aa18.33■□□□□ 0.52
SYNGAP1-207ENST00000628646 UGGT2Q9NYU1 1516 aa18.33■□□□□ 0.52
SYNGAP1-207ENST00000628646 DNAJC5Q9H3Z4 198 aa18.33■□□□□ 0.52
SYNGAP1-207ENST00000628646 CCDC18Q5T9S5 1454 aa18.32■□□□□ 0.52
SYNGAP1-207ENST00000628646 PLPPR3Q6T4P5 718 aa18.29■□□□□ 0.52
SYNGAP1-207ENST00000628646 KIAA0556O60303 1618 aa18.28■□□□□ 0.52
SYNGAP1-207ENST00000628646 DISP1Q96F81 1524 aa18.28■□□□□ 0.52
SYNGAP1-207ENST00000628646 FYCO1Q9BQS8 1478 aa18.27■□□□□ 0.51
SYNGAP1-207ENST00000628646 ESF1Q9H501 851 aaKnown RBP18.26■□□□□ 0.51
SYNGAP1-207ENST00000628646 RRP7BPQ9NSQ0 103 aa18.26■□□□□ 0.51
SYNGAP1-207ENST00000628646 CDK13Q14004 1512 aaKnown RBP18.25■□□□□ 0.51
SYNGAP1-207ENST00000628646 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
SYNGAP1-207ENST00000628646 ARID4BQ4LE39 1312 aaPredicted RBP18.24■□□□□ 0.51
SYNGAP1-207ENST00000628646 RRBP1Q9P2E9 1410 aaKnown RBP18.23■□□□□ 0.51
SYNGAP1-207ENST00000628646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.23■□□□□ 0.511e-6■■■■□ 21.3
SYNGAP1-207ENST00000628646 HECW1Q76N89 1606 aa18.22■□□□□ 0.51
SYNGAP1-207ENST00000628646 HNRNPMP52272 730 aaKnown RBP eCLIP18.22■□□□□ 0.51
SYNGAP1-207ENST00000628646 EPRSP07814 1512 aaKnown RBP18.22■□□□□ 0.51
SYNGAP1-207ENST00000628646 PCF11O94913 1555 aaKnown RBP18.19■□□□□ 0.5
SYNGAP1-207ENST00000628646 ERCC6L2Q5T890 1561 aa18.19■□□□□ 0.5
SYNGAP1-207ENST00000628646 MAP3K1Q13233 1512 aa18.19■□□□□ 0.5
SYNGAP1-207ENST00000628646 TIAM1Q13009 1591 aa18.16■□□□□ 0.5
SYNGAP1-207ENST00000628646 TROQ12816 1431 aaPredicted RBP18.16■□□□□ 0.5
SYNGAP1-207ENST00000628646 LRRC9Q6ZRR7 1453 aa18.15■□□□□ 0.5
SYNGAP1-207ENST00000628646 ATP10BO94823 1461 aa18.14■□□□□ 0.49
SYNGAP1-207ENST00000628646 RAPGEF6Q8TEU7 1601 aa18.14■□□□□ 0.49
SYNGAP1-207ENST00000628646 CLASP1Q7Z460 1538 aa18.13■□□□□ 0.49
SYNGAP1-207ENST00000628646 CFAP43Q8NDM7 1665 aa18.13■□□□□ 0.49
SYNGAP1-207ENST00000628646 ZNF644Q9H582 1327 aaPredicted RBP18.13■□□□□ 0.49
SYNGAP1-207ENST00000628646 MLECQ14165 292 aa18.13■□□□□ 0.49
SYNGAP1-207ENST00000628646 NUP153P49790 1475 aaKnown RBP18.12■□□□□ 0.49
SYNGAP1-207ENST00000628646 ASXL2Q76L83 1435 aa18.12■□□□□ 0.49
SYNGAP1-207ENST00000628646 NCOA2Q15596 1464 aa18.1■□□□□ 0.49
SYNGAP1-207ENST00000628646 SPAG9O60271 1321 aaKnown RBP18.09■□□□□ 0.49
SYNGAP1-207ENST00000628646 ABCC2Q92887 1545 aa18.09■□□□□ 0.49
SYNGAP1-207ENST00000628646 SAMD9Q5K651 1589 aa18.09■□□□□ 0.49
SYNGAP1-207ENST00000628646 DHX57Q6P158 1386 aaKnown RBP18.08■□□□□ 0.48
SYNGAP1-207ENST00000628646 CD109Q6YHK3 1445 aa18.07■□□□□ 0.48
SYNGAP1-207ENST00000628646 PHLDB1Q86UU1 1377 aa18.06■□□□□ 0.48
SYNGAP1-207ENST00000628646 ARHGAP5Q13017 1502 aa18.06■□□□□ 0.48
SYNGAP1-207ENST00000628646 AFAP1Q8N556 730 aa18.04■□□□□ 0.48
SYNGAP1-207ENST00000628646 EHBP1L1Q8N3D4 1523 aa18.03■□□□□ 0.48
SYNGAP1-207ENST00000628646 GGT6Q6P531 493 aa18.03■□□□□ 0.48
SYNGAP1-207ENST00000628646 RSPH4AQ5TD94 716 aa18.03■□□□□ 0.48
SYNGAP1-207ENST00000628646 MYOM3Q5VTT5 1437 aa18.03■□□□□ 0.48
SYNGAP1-207ENST00000628646 NEUROD1Q13562 356 aa18.03■□□□□ 0.48
SYNGAP1-207ENST00000628646 DIEXFQ68CQ4 756 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms