RNA–Protein interactions for RNA: ENST00000627869.1

CHRNA4-210, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-210ENST00000627869 ABCC10Q5T3U5 1492 aa20.33■□□□□ 0.85
CHRNA4-210ENST00000627869 FAM69CQ0P6D2 419 aa20.3■□□□□ 0.84
CHRNA4-210ENST00000627869 DIP2BQ9P265 1576 aa20.29■□□□□ 0.84
CHRNA4-210ENST00000627869 ILDR1Q86SU0 546 aaPredicted RBP20.28■□□□□ 0.84
CHRNA4-210ENST00000627869 MAPKBP1O60336 1514 aa20.26■□□□□ 0.83
CHRNA4-210ENST00000627869 JPH4Q96JJ6 628 aa20.25■□□□□ 0.83
CHRNA4-210ENST00000627869 KIF27Q86VH2 1401 aa20.24■□□□□ 0.83
CHRNA4-210ENST00000627869 ADCY10Q96PN6 1610 aa20.24■□□□□ 0.83
CHRNA4-210ENST00000627869 KDM6BO15054 1643 aa20.22■□□□□ 0.83
CHRNA4-210ENST00000627869 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
CHRNA4-210ENST00000627869 IGF1RP08069 1367 aa20.21■□□□□ 0.83
CHRNA4-210ENST00000627869 TSPOAP1O95153 1857 aa20.16■□□□□ 0.82
CHRNA4-210ENST00000627869 NPM1P06748 294 aaKnown RBP eCLIP20.13■□□□□ 0.81
CHRNA4-210ENST00000627869 CARMIL1Q5VZK9 1371 aa20.08■□□□□ 0.81
CHRNA4-210ENST00000627869 CUL7Q14999 1698 aa20.07■□□□□ 0.8
CHRNA4-210ENST00000627869 KIAA0586Q9BVV6 1533 aa20.05■□□□□ 0.8
CHRNA4-210ENST00000627869 PPRC1Q5VV67 1664 aaKnown RBP20.03■□□□□ 0.8
CHRNA4-210ENST00000627869 ADGRL1O94910 1474 aa20■□□□□ 0.79
CHRNA4-210ENST00000627869 COL17A1Q9UMD9 1497 aaPredicted RBP19.95■□□□□ 0.78
CHRNA4-210ENST00000627869 HECW2Q9P2P5 1572 aa19.93■□□□□ 0.78
CHRNA4-210ENST00000627869 GLI2P10070 1586 aa19.91■□□□□ 0.78
CHRNA4-210ENST00000627869 PTPRGP23470 1445 aa19.91■□□□□ 0.78
CHRNA4-210ENST00000627869 ASXL2Q76L83 1435 aa19.91■□□□□ 0.78
CHRNA4-210ENST00000627869 ABCC2Q92887 1545 aa19.91■□□□□ 0.78
CHRNA4-210ENST00000627869 RAPGEF2Q9Y4G8 1499 aa19.9■□□□□ 0.78
CHRNA4-210ENST00000627869 CARMIL2Q6F5E8 1435 aa19.88■□□□□ 0.77
CHRNA4-210ENST00000627869 TTBK1Q5TCY1 1321 aaPredicted RBP19.86■□□□□ 0.77
CHRNA4-210ENST00000627869 PLB1Q6P1J6 1458 aa19.86■□□□□ 0.77
CHRNA4-210ENST00000627869 IQGAP2Q13576 1575 aa19.84■□□□□ 0.77
CHRNA4-210ENST00000627869 TNIKQ9UKE5 1360 aa19.83■□□□□ 0.77
CHRNA4-210ENST00000627869 MAP3K4Q9Y6R4 1608 aa19.82■□□□□ 0.76
CHRNA4-210ENST00000627869 UHRF1BP1LA0JNW5 1464 aa19.8■□□□□ 0.76
CHRNA4-210ENST00000627869 EPRSP07814 1512 aaKnown RBP19.8■□□□□ 0.76
CHRNA4-210ENST00000627869 DISP1Q96F81 1524 aa19.75■□□□□ 0.75
CHRNA4-210ENST00000627869 UACAQ9BZF9 1416 aa19.75■□□□□ 0.75
CHRNA4-210ENST00000627869 CHIC1Q5VXU3 224 aa19.74■□□□□ 0.75
CHRNA4-210ENST00000627869 UGGT2Q9NYU1 1516 aa19.74■□□□□ 0.75
CHRNA4-210ENST00000627869 KDM5BQ9UGL1 1544 aa19.74■□□□□ 0.75
CHRNA4-210ENST00000627869 PRXQ9BXM0 1461 aa19.73■□□□□ 0.75
CHRNA4-210ENST00000627869 ZCCHC11Q5TAX3 1644 aaKnown RBP19.71■□□□□ 0.75
CHRNA4-210ENST00000627869 TEX14Q8IWB6 1497 aa19.7■□□□□ 0.74
CHRNA4-210ENST00000627869 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
CHRNA4-210ENST00000627869 KIAA0556O60303 1618 aa19.65■□□□□ 0.74
CHRNA4-210ENST00000627869 GOLGA3Q08378 1498 aa19.64■□□□□ 0.73
CHRNA4-210ENST00000627869 EEA1Q15075 1411 aa19.61■□□□□ 0.73
CHRNA4-210ENST00000627869 FBXO41Q8TF61 875 aa19.61■□□□□ 0.73
CHRNA4-210ENST00000627869 WDR7Q9Y4E6 1490 aa19.6■□□□□ 0.73
CHRNA4-210ENST00000627869 KIF21BO75037 1637 aa19.58■□□□□ 0.73
CHRNA4-210ENST00000627869 CTTNBP2Q8WZ74 1663 aa19.58■□□□□ 0.72
CHRNA4-210ENST00000627869 FAM9AQ8IZU1 332 aaPredicted RBP19.57■□□□□ 0.72
CHRNA4-210ENST00000627869 MAGI3Q5TCQ9 1506 aa19.56■□□□□ 0.72
CHRNA4-210ENST00000627869 CFAP43Q8NDM7 1665 aa19.54■□□□□ 0.72
CHRNA4-210ENST00000627869 CD109Q6YHK3 1445 aa19.53■□□□□ 0.72
CHRNA4-210ENST00000627869 P3H3Q8IVL6 736 aa19.52■□□□□ 0.72
CHRNA4-210ENST00000627869 KCNH8Q96L42 1107 aa19.47■□□□□ 0.71
CHRNA4-210ENST00000627869 ABCA8O94911 1581 aa19.46■□□□□ 0.71
CHRNA4-210ENST00000627869 ADAMTSL3P82987 1691 aa19.46■□□□□ 0.71
CHRNA4-210ENST00000627869 PTPRMP28827 1452 aa19.45■□□□□ 0.7
CHRNA4-210ENST00000627869 RANGAP1P46060 587 aaPredicted RBP19.44■□□□□ 0.7
CHRNA4-210ENST00000627869 ARAP3Q8WWN8 1544 aa19.43■□□□□ 0.7
CHRNA4-210ENST00000627869 ARID3CA6NKF2 412 aa19.4■□□□□ 0.7
CHRNA4-210ENST00000627869 SAMD9Q5K651 1589 aa19.38■□□□□ 0.69
CHRNA4-210ENST00000627869 LMTK3Q96Q04 1460 aa19.36■□□□□ 0.69
CHRNA4-210ENST00000627869 PCF11O94913 1555 aaKnown RBP19.36■□□□□ 0.69
CHRNA4-210ENST00000627869 ATP10BO94823 1461 aa19.35■□□□□ 0.69
CHRNA4-210ENST00000627869 BCORL1Q5H9F3 1711 aa19.34■□□□□ 0.69
CHRNA4-210ENST00000627869 MADDQ8WXG6 1647 aa19.34■□□□□ 0.69
CHRNA4-210ENST00000627869 UBTFP17480 764 aaKnown RBP19.34■□□□□ 0.69
CHRNA4-210ENST00000627869 EHMT2Q96KQ7 1210 aa19.34■□□□□ 0.69
CHRNA4-210ENST00000627869 FHOD3Q2V2M9 1422 aa19.34■□□□□ 0.69
CHRNA4-210ENST00000627869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.33■□□□□ 0.68
CHRNA4-210ENST00000627869 HNRNPUL2Q1KMD3 747 aaKnown RBP19.33■□□□□ 0.68
CHRNA4-210ENST00000627869 RAPGEF3O95398 923 aa19.31■□□□□ 0.68
CHRNA4-210ENST00000627869 ABCA9Q8IUA7 1624 aa19.31■□□□□ 0.68
CHRNA4-210ENST00000627869 FRMPD1Q5SYB0 1578 aa19.31■□□□□ 0.68
CHRNA4-210ENST00000627869 EFCAB5A4FU69 1503 aa19.27■□□□□ 0.68
CHRNA4-210ENST00000627869 RAPGEF6Q8TEU7 1601 aa19.27■□□□□ 0.68
CHRNA4-210ENST00000627869 NUP153P49790 1475 aaKnown RBP19.25■□□□□ 0.67
CHRNA4-210ENST00000627869 PHLDB1Q86UU1 1377 aa19.24■□□□□ 0.67
CHRNA4-210ENST00000627869 RIMS1Q86UR5 1692 aaKnown RBP19.24■□□□□ 0.67
CHRNA4-210ENST00000627869 PLEKHD1A6NEE1 506 aa19.22■□□□□ 0.67
CHRNA4-210ENST00000627869 HSPA2P54652 639 aa19.22■□□□□ 0.67
CHRNA4-210ENST00000627869 NEO1Q92859 1461 aa19.22■□□□□ 0.67
CHRNA4-210ENST00000627869 SIGLEC1Q9BZZ2 1709 aa19.19■□□□□ 0.66
CHRNA4-210ENST00000627869 ARID4BQ4LE39 1312 aaPredicted RBP19.19■□□□□ 0.66
CHRNA4-210ENST00000627869 ARHGEF40Q8TER5 1519 aa19.18■□□□□ 0.66
CHRNA4-210ENST00000627869 ILDR2Q71H61 639 aa19.17■□□□□ 0.66
CHRNA4-210ENST00000627869 FMN1Q68DA7 1419 aa19.16■□□□□ 0.66
CHRNA4-210ENST00000627869 RICTORQ6R327 1708 aa19.15■□□□□ 0.66
CHRNA4-210ENST00000627869 CERKQ8TCT0 537 aa19.15■□□□□ 0.66
CHRNA4-210ENST00000627869 ATP1B4Q9UN42 357 aaPredicted RBP19.15■□□□□ 0.66
CHRNA4-210ENST00000627869 ARHGAP35Q9NRY4 1499 aa19.14■□□□□ 0.65
CHRNA4-210ENST00000627869 PLPPR3Q6T4P5 718 aa19.09■□□□□ 0.65
CHRNA4-210ENST00000627869 DENND4BO75064 1496 aaPredicted RBP19.08■□□□□ 0.64
CHRNA4-210ENST00000627869 CDK13Q14004 1512 aaKnown RBP19.07■□□□□ 0.64
CHRNA4-210ENST00000627869 CDK11AQ9UQ88 783 aaPredicted RBP19.07■□□□□ 0.64
CHRNA4-210ENST00000627869 YEATS2Q9ULM3 1422 aa19.07■□□□□ 0.64
CHRNA4-210ENST00000627869 SOCS7O14512 581 aa19.05■□□□□ 0.64
CHRNA4-210ENST00000627869 AKNAQ7Z591 1439 aa19.05■□□□□ 0.64
CHRNA4-210ENST00000627869 DISP3Q9P2K9 1392 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms