RNA–Protein interactions for RNA: ENST00000624492.3

GDF9-206, Transcript of growth differentiation factor 9, humanhuman

TSL 2 BASIC

Gene GDF9, Length 1,823 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-206ENST00000624492 HNRNPUL2Q1KMD3 747 aaKnown RBP14.35□□□□□ -0.11
GDF9-206ENST00000624492 TARBP1Q13395 1621 aaKnown RBP14.35□□□□□ -0.11
GDF9-206ENST00000624492 KANK4Q5T7N3 995 aaPredicted RBP14.34□□□□□ -0.11
GDF9-206ENST00000624492 IFT140Q96RY7 1462 aa14.31□□□□□ -0.12
GDF9-206ENST00000624492 P3H3Q8IVL6 736 aa14.3□□□□□ -0.12
GDF9-206ENST00000624492 CTTNBP2Q8WZ74 1663 aa14.29□□□□□ -0.12
GDF9-206ENST00000624492 WDR62O43379 1518 aa14.29□□□□□ -0.12
GDF9-206ENST00000624492 ERCC6Q03468 1493 aa14.28□□□□□ -0.12
GDF9-206ENST00000624492 TIAM1Q13009 1591 aa14.28□□□□□ -0.12
GDF9-206ENST00000624492 FMN1Q68DA7 1419 aa14.28□□□□□ -0.12
GDF9-206ENST00000624492 RRBP1Q9P2E9 1410 aaKnown RBP14.28□□□□□ -0.12
GDF9-206ENST00000624492 AQRO60306 1485 aaKnown RBP eCLIP14.28□□□□□ -0.12
GDF9-206ENST00000624492 GRIN2BQ13224 1484 aa14.28□□□□□ -0.12
GDF9-206ENST00000624492 FHOD3Q2V2M9 1422 aa14.27□□□□□ -0.12
GDF9-206ENST00000624492 FYCO1Q9BQS8 1478 aa14.26□□□□□ -0.13
GDF9-206ENST00000624492 CASKIN1Q8WXD9 1431 aa14.26□□□□□ -0.13
GDF9-206ENST00000624492 ATP1B4Q9UN42 357 aaPredicted RBP14.25□□□□□ -0.13
GDF9-206ENST00000624492 CCNB3Q8WWL7 1395 aa14.25□□□□□ -0.13
GDF9-206ENST00000624492 LRRC9Q6ZRR7 1453 aa14.24□□□□□ -0.13
GDF9-206ENST00000624492 PCF11O94913 1555 aaKnown RBP14.23□□□□□ -0.13
GDF9-206ENST00000624492 PBRM1Q86U86 1689 aa14.21□□□□□ -0.13
GDF9-206ENST00000624492 ADAMTS12P58397 1594 aa14.21□□□□□ -0.14
GDF9-206ENST00000624492 SAMD9Q5K651 1589 aa14.2□□□□□ -0.14
GDF9-206ENST00000624492 CFAP43Q8NDM7 1665 aa14.19□□□□□ -0.14
GDF9-206ENST00000624492 ZNF608Q9ULD9 1512 aaPredicted RBP14.17□□□□□ -0.14
GDF9-206ENST00000624492 CLSPNQ9HAW4 1339 aa14.15□□□□□ -0.14
GDF9-206ENST00000624492 IQGAP2Q13576 1575 aa14.14□□□□□ -0.15
GDF9-206ENST00000624492 SNAPC4Q5SXM2 1469 aa14.14□□□□□ -0.15
GDF9-206ENST00000624492 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
GDF9-206ENST00000624492 PHLDB1Q86UU1 1377 aa14.12□□□□□ -0.15
GDF9-206ENST00000624492 MTUS2Q5JR59 1369 aa14.12□□□□□ -0.15
GDF9-206ENST00000624492 MAGI1Q96QZ7 1491 aaPredicted RBP14.11□□□□□ -0.15
GDF9-206ENST00000624492 EIF4G3O43432 1585 aaKnown RBP14.11□□□□□ -0.15
GDF9-206ENST00000624492 KIAA0586Q9BVV6 1533 aa14.1□□□□□ -0.15
GDF9-206ENST00000624492 ITGAEP38570 1179 aa14.1□□□□□ -0.15
GDF9-206ENST00000624492 FAM50AQ14320 339 aaKnown RBP14.09□□□□□ -0.15
GDF9-206ENST00000624492 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.09□□□□□ -0.15
GDF9-206ENST00000624492 UGGT2Q9NYU1 1516 aa14.09□□□□□ -0.15
GDF9-206ENST00000624492 GRIN2AQ12879 1464 aa14.08□□□□□ -0.15
GDF9-206ENST00000624492 CCDC18Q5T9S5 1454 aa14.08□□□□□ -0.15
GDF9-206ENST00000624492 DHX57Q6P158 1386 aaKnown RBP14.07□□□□□ -0.16
GDF9-206ENST00000624492 CHMP7Q8WUX9 453 aaPredicted RBP14.07□□□□□ -0.16
GDF9-206ENST00000624492 SYNJ2O15056 1496 aa14.05□□□□□ -0.16
GDF9-206ENST00000624492 SENP3Q9H4L4 574 aaPredicted RBP14.05□□□□□ -0.16
GDF9-206ENST00000624492 HECW1Q76N89 1606 aa14.04□□□□□ -0.16
GDF9-206ENST00000624492 EHBP1L1Q8N3D4 1523 aa14.04□□□□□ -0.16
GDF9-206ENST00000624492 SETD5Q9C0A6 1442 aa14.03□□□□□ -0.16
GDF9-206ENST00000624492 FGD6Q6ZV73 1430 aa14.02□□□□□ -0.16
GDF9-206ENST00000624492 RAB3GAP2Q9H2M9 1393 aa14.01□□□□□ -0.17
GDF9-206ENST00000624492 ZNF316A6NFI3 1004 aaPredicted RBP14□□□□□ -0.17
GDF9-206ENST00000624492 NCOA2Q15596 1464 aa14□□□□□ -0.17
GDF9-206ENST00000624492 FBLN2P98095 1184 aa13.99□□□□□ -0.17
GDF9-206ENST00000624492 MYOM3Q5VTT5 1437 aa13.99□□□□□ -0.17
GDF9-206ENST00000624492 EPRSP07814 1512 aaKnown RBP13.98□□□□□ -0.17
GDF9-206ENST00000624492 SUPT6HQ7KZ85 1726 aaKnown RBP13.98□□□□□ -0.17
GDF9-206ENST00000624492 KIAA0556O60303 1618 aa13.98□□□□□ -0.17
GDF9-206ENST00000624492 DISP1Q96F81 1524 aa13.98□□□□□ -0.17
GDF9-206ENST00000624492 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
GDF9-206ENST00000624492 CARMIL2Q6F5E8 1435 aa13.96□□□□□ -0.17
GDF9-206ENST00000624492 DIEXFQ68CQ4 756 aaKnown RBP13.96□□□□□ -0.17
GDF9-206ENST00000624492 NUP160Q12769 1436 aa13.96□□□□□ -0.17
GDF9-206ENST00000624492 CDK11AQ9UQ88 783 aaPredicted RBP13.95□□□□□ -0.18
GDF9-206ENST00000624492 LRRIQ1Q96JM4 1722 aa13.94□□□□□ -0.18
GDF9-206ENST00000624492 CEP170Q5SW79 1584 aa13.94□□□□□ -0.18
GDF9-206ENST00000624492 ARHGEF11O15085 1522 aa13.93□□□□□ -0.18
GDF9-206ENST00000624492 JPH4Q96JJ6 628 aa13.92□□□□□ -0.18
GDF9-206ENST00000624492 MAGI3Q5TCQ9 1506 aa13.91□□□□□ -0.18
GDF9-206ENST00000624492 MIA2Q96PC5 1412 aa13.9□□□□□ -0.18
GDF9-206ENST00000624492 CDK13Q14004 1512 aaKnown RBP13.9□□□□□ -0.18
GDF9-206ENST00000624492 RAPGEF6Q8TEU7 1601 aa13.89□□□□□ -0.19
GDF9-206ENST00000624492 TCOF1Q13428 1488 aaKnown RBP13.88□□□□□ -0.19
GDF9-206ENST00000624492 NUP153P49790 1475 aaKnown RBP13.88□□□□□ -0.19
GDF9-206ENST00000624492 ARID3CA6NKF2 412 aa13.87□□□□□ -0.19
GDF9-206ENST00000624492 PTPN23Q9H3S7 1636 aa13.87□□□□□ -0.19
GDF9-206ENST00000624492 HFM1A2PYH4 1435 aa13.87□□□□□ -0.19
GDF9-206ENST00000624492 TIMELESSQ9UNS1 1208 aa13.84□□□□□ -0.19
GDF9-206ENST00000624492 MAPKBP1O60336 1514 aa13.84□□□□□ -0.19
GDF9-206ENST00000624492 PTPRKQ15262 1439 aa13.83□□□□□ -0.2
GDF9-206ENST00000624492 ACIN1Q9UKV3 1341 aaKnown RBP13.82□□□□□ -0.2
GDF9-206ENST00000624492 TROQ12816 1431 aaPredicted RBP13.82□□□□□ -0.2
GDF9-206ENST00000624492 PLB1Q6P1J6 1458 aa13.81□□□□□ -0.2
GDF9-206ENST00000624492 NAIPQ13075 1403 aa13.81□□□□□ -0.2
GDF9-206ENST00000624492 AKNAQ7Z591 1439 aa13.81□□□□□ -0.2
GDF9-206ENST00000624492 UACAQ9BZF9 1416 aa13.8□□□□□ -0.2
GDF9-206ENST00000624492 PRG4Q92954 1404 aaPredicted RBP13.78□□□□□ -0.2
GDF9-206ENST00000624492 PLEKHD1A6NEE1 506 aa13.78□□□□□ -0.2
GDF9-206ENST00000624492 PTPRGP23470 1445 aa13.76□□□□□ -0.21
GDF9-206ENST00000624492 NEUROD1Q13562 356 aa13.76□□□□□ -0.21
GDF9-206ENST00000624492 ABCA8O94911 1581 aa13.76□□□□□ -0.21
GDF9-206ENST00000624492 RRP7BPQ9NSQ0 103 aa13.76□□□□□ -0.21
GDF9-206ENST00000624492 CHIC2Q9UKJ5 165 aa13.76□□□□□ -0.21
GDF9-206ENST00000624492 ROCK1Q13464 1354 aa13.75□□□□□ -0.21
GDF9-206ENST00000624492 SIN3AQ96ST3 1273 aa13.74□□□□□ -0.21
GDF9-206ENST00000624492 CFDP1Q9UEE9 299 aaPredicted RBP13.74□□□□□ -0.21
GDF9-206ENST00000624492 DAPK1P53355 1430 aa13.73□□□□□ -0.21
GDF9-206ENST00000624492 ATP10BO94823 1461 aa13.71□□□□□ -0.21
GDF9-206ENST00000624492 ADCY10Q96PN6 1610 aa13.71□□□□□ -0.21
GDF9-206ENST00000624492 TRIM52Q96A61 297 aa13.71□□□□□ -0.22
GDF9-206ENST00000624492 GCC2Q8IWJ2 1684 aa13.7□□□□□ -0.22
GDF9-206ENST00000624492 ITSN2Q9NZM3 1697 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms