RNA–Protein interactions for RNA: ENST00000624277.3

CCDC187-204, Transcript of coiled-coil domain containing 187, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC187, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-204ENST00000624277 DAXXQ9UER7 740 aaPredicted RBP18.09■□□□□ 0.49
CCDC187-204ENST00000624277 ATAD2BQ9ULI0 1458 aa18.06■□□□□ 0.48
CCDC187-204ENST00000624277 RAPGEF2Q9Y4G8 1499 aa18.06■□□□□ 0.48
CCDC187-204ENST00000624277 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
CCDC187-204ENST00000624277 CLSPNQ9HAW4 1339 aa18.05■□□□□ 0.48
CCDC187-204ENST00000624277 BCL11AQ9H165 835 aa18.04■□□□□ 0.48
CCDC187-204ENST00000624277 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
CCDC187-204ENST00000624277 MRS2Q9HD23 443 aa18.03■□□□□ 0.48
CCDC187-204ENST00000624277 MTUS2Q5JR59 1369 aa18.03■□□□□ 0.48
CCDC187-204ENST00000624277 RTL5Q5HYW3 569 aaPredicted RBP18.01■□□□□ 0.47
CCDC187-204ENST00000624277 BIVM-ERCC5R4GMW8 1640 aa18■□□□□ 0.47
CCDC187-204ENST00000624277 TOP2BQ02880 1626 aa17.99■□□□□ 0.47
CCDC187-204ENST00000624277 BAZ1BQ9UIG0 1483 aaKnown RBP17.99■□□□□ 0.47
CCDC187-204ENST00000624277 NBR1Q14596 966 aa17.97■□□□□ 0.47
CCDC187-204ENST00000624277 FOXD1Q16676 465 aa17.93■□□□□ 0.46
CCDC187-204ENST00000624277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.46
CCDC187-204ENST00000624277 SENP3Q9H4L4 574 aaPredicted RBP17.93■□□□□ 0.46
CCDC187-204ENST00000624277 CCNB3Q8WWL7 1395 aa17.92■□□□□ 0.46
CCDC187-204ENST00000624277 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
CCDC187-204ENST00000624277 ARAP1Q96P48 1450 aa17.89■□□□□ 0.45
CCDC187-204ENST00000624277 KIF27Q86VH2 1401 aa17.88■□□□□ 0.45
CCDC187-204ENST00000624277 TMC1Q8TDI8 760 aa17.87■□□□□ 0.45
CCDC187-204ENST00000624277 EIF4G2P78344 907 aaKnown RBP eCLIP17.87■□□□□ 0.45
CCDC187-204ENST00000624277 CCDC136Q96JN2 1154 aa17.85■□□□□ 0.45
CCDC187-204ENST00000624277 RGL3Q3MIN7 710 aa17.84■□□□□ 0.45
CCDC187-204ENST00000624277 PRXQ9BXM0 1461 aa17.84■□□□□ 0.45
CCDC187-204ENST00000624277 CUX1P39880 1505 aa17.83■□□□□ 0.45
CCDC187-204ENST00000624277 B4GALNT3Q6L9W6 998 aa17.82■□□□□ 0.44
CCDC187-204ENST00000624277 RAB3GAP2Q9H2M9 1393 aa17.81■□□□□ 0.44
CCDC187-204ENST00000624277 CUX2O14529 1486 aa17.78■□□□□ 0.44
CCDC187-204ENST00000624277 ANP32AP39687 249 aaKnown RBP17.77■□□□□ 0.44
CCDC187-204ENST00000624277 CARMIL1Q5VZK9 1371 aa17.77■□□□□ 0.44
CCDC187-204ENST00000624277 ERICH3Q5RHP9 1530 aa17.76■□□□□ 0.43
CCDC187-204ENST00000624277 TSHZ2Q9NRE2 1034 aa17.76■□□□□ 0.43
CCDC187-204ENST00000624277 ANP32EQ9BTT0 268 aa17.74■□□□□ 0.43
CCDC187-204ENST00000624277 DHX57Q6P158 1386 aaKnown RBP17.73■□□□□ 0.43
CCDC187-204ENST00000624277 CHGAP10645 457 aaKnown RBP17.73■□□□□ 0.43
CCDC187-204ENST00000624277 RBM19Q9Y4C8 960 aaKnown RBP17.7■□□□□ 0.42
CCDC187-204ENST00000624277 CANXP27824 592 aaKnown RBP17.69■□□□□ 0.42
CCDC187-204ENST00000624277 HSPA5P11021 654 aaKnown RBP17.67■□□□□ 0.42
CCDC187-204ENST00000624277 CHMP7Q8WUX9 453 aaPredicted RBP17.67■□□□□ 0.42
CCDC187-204ENST00000624277 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
CCDC187-204ENST00000624277 TSPY4P0CV99 314 aa17.66■□□□□ 0.42
CCDC187-204ENST00000624277 TSPY10P0CW01 314 aa17.66■□□□□ 0.42
CCDC187-204ENST00000624277 HMGXB3Q12766 1538 aa17.66■□□□□ 0.42
CCDC187-204ENST00000624277 SETD5Q9C0A6 1442 aa17.66■□□□□ 0.42
CCDC187-204ENST00000624277 PPP1R15AO75807 674 aaPredicted RBP17.66■□□□□ 0.42
CCDC187-204ENST00000624277 TDRD9Q8NDG6 1382 aaKnown RBP17.65■□□□□ 0.42
CCDC187-204ENST00000624277 ARHGAP35Q9NRY4 1499 aa17.64■□□□□ 0.41
CCDC187-204ENST00000624277 ARXQ96QS3 562 aa17.63■□□□□ 0.41
CCDC187-204ENST00000624277 CFDP1Q9UEE9 299 aaPredicted RBP17.63■□□□□ 0.41
CCDC187-204ENST00000624277 RRBP1Q9P2E9 1410 aaKnown RBP17.63■□□□□ 0.41
CCDC187-204ENST00000624277 ZBTB47Q9UFB7 747 aaPredicted RBP17.61■□□□□ 0.41
CCDC187-204ENST00000624277 NCAPD3P42695 1498 aa17.61■□□□□ 0.41
CCDC187-204ENST00000624277 FHOD3Q2V2M9 1422 aa17.59■□□□□ 0.41
CCDC187-204ENST00000624277 CARD11Q9BXL7 1154 aa17.59■□□□□ 0.41
CCDC187-204ENST00000624277 MAPKBP1O60336 1514 aa17.59■□□□□ 0.41
CCDC187-204ENST00000624277 CFTRP13569 1480 aa17.58■□□□□ 0.4
CCDC187-204ENST00000624277 L3MBTL2Q969R5 705 aa17.54■□□□□ 0.4
CCDC187-204ENST00000624277 CC2D1BQ5T0F9 858 aaKnown RBP17.53■□□□□ 0.4
CCDC187-204ENST00000624277 DCAF11Q8TEB1 546 aa17.51■□□□□ 0.39
CCDC187-204ENST00000624277 LAS1LQ9Y4W2 734 aaKnown RBP17.51■□□□□ 0.39
CCDC187-204ENST00000624277 PPP4R2Q9NY27 417 aa17.5■□□□□ 0.39
CCDC187-204ENST00000624277 PLEKHD1A6NEE1 506 aa17.5■□□□□ 0.39
CCDC187-204ENST00000624277 NEUROD2Q15784 382 aa17.49■□□□□ 0.39
CCDC187-204ENST00000624277 MPHOSPH9Q99550 1183 aa17.49■□□□□ 0.39
CCDC187-204ENST00000624277 RTN4Q9NQC3 1192 aaKnown RBP17.49■□□□□ 0.39
CCDC187-204ENST00000624277 SLC24A1O60721 1099 aa17.48■□□□□ 0.39
CCDC187-204ENST00000624277 EIF5BO60841 1220 aaKnown RBP17.48■□□□□ 0.39
CCDC187-204ENST00000624277 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
CCDC187-204ENST00000624277 CCER2I3L3R5 266 aa17.46■□□□□ 0.39
CCDC187-204ENST00000624277 WDR43Q15061 677 aaKnown RBP eCLIP17.46■□□□□ 0.39
CCDC187-204ENST00000624277 PLPPR3Q6T4P5 718 aa17.46■□□□□ 0.39
CCDC187-204ENST00000624277 TIAM1Q13009 1591 aa17.46■□□□□ 0.38
CCDC187-204ENST00000624277 TNNT2P45379 298 aaPredicted RBP17.45■□□□□ 0.38
CCDC187-204ENST00000624277 PKD2Q13563 968 aa17.45■□□□□ 0.38
CCDC187-204ENST00000624277 LRRIQ1Q96JM4 1722 aa17.44■□□□□ 0.38
CCDC187-204ENST00000624277 IGF1RP08069 1367 aa17.43■□□□□ 0.38
CCDC187-204ENST00000624277 CFAP43Q8NDM7 1665 aa17.42■□□□□ 0.38
CCDC187-204ENST00000624277 RGS3P49796 1198 aa17.41■□□□□ 0.38
CCDC187-204ENST00000624277 PHLDB1Q86UU1 1377 aa17.4■□□□□ 0.38
CCDC187-204ENST00000624277 PCF11O94913 1555 aaKnown RBP17.38■□□□□ 0.37
CCDC187-204ENST00000624277 TIMELESSQ9UNS1 1208 aa17.38■□□□□ 0.37
CCDC187-204ENST00000624277 WDR97A6NE52 1622 aa17.36■□□□□ 0.37
CCDC187-204ENST00000624277 MAP3K1Q13233 1512 aa17.34■□□□□ 0.37
CCDC187-204ENST00000624277 ZNF644Q9H582 1327 aaPredicted RBP17.34■□□□□ 0.37
CCDC187-204ENST00000624277 FGD5Q6ZNL6 1462 aa17.33■□□□□ 0.37
CCDC187-204ENST00000624277 LRRC9Q6ZRR7 1453 aa17.32■□□□□ 0.36
CCDC187-204ENST00000624277 NOP58Q9Y2X3 529 aaKnown RBP17.32■□□□□ 0.36
CCDC187-204ENST00000624277 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
CCDC187-204ENST00000624277 CCDC184Q52MB2 194 aa17.3■□□□□ 0.36
CCDC187-204ENST00000624277 KNSTRNQ9Y448 316 aa17.29■□□□□ 0.36
CCDC187-204ENST00000624277 FRAT1Q92837 279 aaPredicted RBP17.28■□□□□ 0.36
CCDC187-204ENST00000624277 PRKRIP1Q9H875 184 aaPredicted RBP17.28■□□□□ 0.36
CCDC187-204ENST00000624277 PLEKHG5O94827 1062 aa17.28■□□□□ 0.36
CCDC187-204ENST00000624277 DNAJC5BQ9UF47 199 aa17.27■□□□□ 0.36
CCDC187-204ENST00000624277 RAD54L2Q9Y4B4 1467 aa17.27■□□□□ 0.36
CCDC187-204ENST00000624277 NEFMP07197 916 aa17.27■□□□□ 0.35
CCDC187-204ENST00000624277 DEKP35659 375 aaKnown RBP17.27■□□□□ 0.35
CCDC187-204ENST00000624277 HNRNPMP52272 730 aaKnown RBP eCLIP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms