RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 PRG4Q92954 1404 aaPredicted RBP35.86■■■■□ 3.33
PCDHB4-202ENST00000623478 JPH4Q96JJ6 628 aa35.85■■■■□ 3.33
PCDHB4-202ENST00000623478 KIAA0586Q9BVV6 1533 aa35.79■■■■□ 3.32
PCDHB4-202ENST00000623478 TRHP20396 242 aaPredicted RBP35.75■■■■□ 3.31
PCDHB4-202ENST00000623478 RAPGEF2Q9Y4G8 1499 aa35.62■■■■□ 3.29
PCDHB4-202ENST00000623478 IQGAP2Q13576 1575 aa35.56■■■■□ 3.28
PCDHB4-202ENST00000623478 ADCY10Q96PN6 1610 aa35.41■■■■□ 3.26
PCDHB4-202ENST00000623478 PRXQ9BXM0 1461 aa35.41■■■■□ 3.26
PCDHB4-202ENST00000623478 CARMIL2Q6F5E8 1435 aa35.4■■■■□ 3.26
PCDHB4-202ENST00000623478 DISP1Q96F81 1524 aa35.36■■■■□ 3.25
PCDHB4-202ENST00000623478 PTPRGP23470 1445 aa35.35■■■■□ 3.25
PCDHB4-202ENST00000623478 TTBK1Q5TCY1 1321 aaPredicted RBP35.34■■■■□ 3.25
PCDHB4-202ENST00000623478 UGGT2Q9NYU1 1516 aa35.34■■■■□ 3.25
PCDHB4-202ENST00000623478 TNIKQ9UKE5 1360 aa35.34■■■■□ 3.25
PCDHB4-202ENST00000623478 CTTNBP2Q8WZ74 1663 aa35.33■■■■□ 3.25
PCDHB4-202ENST00000623478 NPM1P06748 294 aaKnown RBP eCLIP35.25■■■■□ 3.23
PCDHB4-202ENST00000623478 KIAA0556O60303 1618 aa35.24■■■■□ 3.23
PCDHB4-202ENST00000623478 CSRNP3Q8WYN3 585 aa35.23■■■■□ 3.23
PCDHB4-202ENST00000623478 MAPKBP1O60336 1514 aa35.22■■■■□ 3.23
PCDHB4-202ENST00000623478 KIF13AQ9H1H9 1805 aa35.2■■■■□ 3.23
PCDHB4-202ENST00000623478 EEA1Q15075 1411 aa35.18■■■■□ 3.22
PCDHB4-202ENST00000623478 ABCC10Q5T3U5 1492 aa35.12■■■■□ 3.21
PCDHB4-202ENST00000623478 ABCC2Q92887 1545 aa35.11■■■■□ 3.21
PCDHB4-202ENST00000623478 FAM9AQ8IZU1 332 aaPredicted RBP35.11■■■■□ 3.21
PCDHB4-202ENST00000623478 UACAQ9BZF9 1416 aa35.11■■■■□ 3.21
PCDHB4-202ENST00000623478 CHIC1Q5VXU3 224 aa35.1■■■■□ 3.21
PCDHB4-202ENST00000623478 UHRF1BP1LA0JNW5 1464 aa35.09■■■■□ 3.21
PCDHB4-202ENST00000623478 GOLGA3Q08378 1498 aa35.08■■■■□ 3.21
PCDHB4-202ENST00000623478 DIP2BQ9P265 1576 aa35.08■■■■□ 3.21
PCDHB4-202ENST00000623478 FAM69CQ0P6D2 419 aa35.05■■■■□ 3.2
PCDHB4-202ENST00000623478 PLB1Q6P1J6 1458 aa34.96■■■■□ 3.19
PCDHB4-202ENST00000623478 ASXL2Q76L83 1435 aa34.94■■■■□ 3.18
PCDHB4-202ENST00000623478 KDM5BQ9UGL1 1544 aa34.94■■■■□ 3.18
PCDHB4-202ENST00000623478 KIF21BO75037 1637 aa34.92■■■■□ 3.18
PCDHB4-202ENST00000623478 ZCCHC11Q5TAX3 1644 aaKnown RBP34.91■■■■□ 3.18
PCDHB4-202ENST00000623478 ABCA8O94911 1581 aa34.87■■■■□ 3.17
PCDHB4-202ENST00000623478 P3H3Q8IVL6 736 aa34.87■■■■□ 3.17
PCDHB4-202ENST00000623478 SAMD9Q5K651 1589 aa34.87■■■■□ 3.17
PCDHB4-202ENST00000623478 TSPOAP1O95153 1857 aa34.8■■■■□ 3.16
PCDHB4-202ENST00000623478 RANGAP1P46060 587 aaPredicted RBP34.78■■■■□ 3.16
PCDHB4-202ENST00000623478 GLI2P10070 1586 aa34.76■■■■□ 3.16
PCDHB4-202ENST00000623478 EPRSP07814 1512 aaKnown RBP34.74■■■■□ 3.15
PCDHB4-202ENST00000623478 EHMT2Q96KQ7 1210 aa34.73■■■■□ 3.15
PCDHB4-202ENST00000623478 WDR7Q9Y4E6 1490 aa34.7■■■■□ 3.15
PCDHB4-202ENST00000623478 FHOD3Q2V2M9 1422 aa34.66■■■■□ 3.14
PCDHB4-202ENST00000623478 PPRC1Q5VV67 1664 aaKnown RBP34.66■■■■□ 3.14
PCDHB4-202ENST00000623478 ARID3CA6NKF2 412 aa34.64■■■■□ 3.14
PCDHB4-202ENST00000623478 KDM6BO15054 1643 aa34.62■■■■□ 3.13
PCDHB4-202ENST00000623478 MAP3K4Q9Y6R4 1608 aa34.62■■■■□ 3.13
PCDHB4-202ENST00000623478 RAPGEF6Q8TEU7 1601 aa34.61■■■■□ 3.13
PCDHB4-202ENST00000623478 EFCAB5A4FU69 1503 aa34.6■■■■□ 3.13
PCDHB4-202ENST00000623478 UBTFP17480 764 aaKnown RBP34.6■■■■□ 3.13
PCDHB4-202ENST00000623478 ATP10BO94823 1461 aa34.58■■■■□ 3.13
PCDHB4-202ENST00000623478 KCNH8Q96L42 1107 aa34.51■■■■□ 3.12
PCDHB4-202ENST00000623478 NUP153P49790 1475 aaKnown RBP34.5■■■■□ 3.11
PCDHB4-202ENST00000623478 TEX14Q8IWB6 1497 aa34.45■■■■□ 3.1
PCDHB4-202ENST00000623478 CFAP43Q8NDM7 1665 aa34.43■■■■□ 3.1
PCDHB4-202ENST00000623478 ARHGAP35Q9NRY4 1499 aa34.4■■■■□ 3.1
PCDHB4-202ENST00000623478 CD109Q6YHK3 1445 aa34.4■■■■□ 3.1
PCDHB4-202ENST00000623478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.38■■■■□ 3.09
PCDHB4-202ENST00000623478 HNRNPUL2Q1KMD3 747 aaKnown RBP34.38■■■■□ 3.09
PCDHB4-202ENST00000623478 COL17A1Q9UMD9 1497 aaPredicted RBP34.37■■■■□ 3.09
PCDHB4-202ENST00000623478 MAGI3Q5TCQ9 1506 aa34.35■■■■□ 3.09
PCDHB4-202ENST00000623478 ABCA9Q8IUA7 1624 aa34.29■■■■□ 3.08
PCDHB4-202ENST00000623478 FMN1Q68DA7 1419 aa34.27■■■■□ 3.08
PCDHB4-202ENST00000623478 CDK13Q14004 1512 aaKnown RBP34.24■■■■□ 3.07
PCDHB4-202ENST00000623478 AEBP2Q6ZN18 517 aaPredicted RBP34.22■■■■□ 3.07
PCDHB4-202ENST00000623478 HECW1Q76N89 1606 aa34.19■■■■□ 3.06
PCDHB4-202ENST00000623478 PLEKHD1A6NEE1 506 aa34.18■■■■□ 3.06
PCDHB4-202ENST00000623478 ATP1B4Q9UN42 357 aaPredicted RBP34.15■■■■□ 3.06
PCDHB4-202ENST00000623478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.07■■■■□ 3.04
PCDHB4-202ENST00000623478 ARAP3Q8WWN8 1544 aa34.07■■■■□ 3.04
PCDHB4-202ENST00000623478 TTC37Q6PGP7 1564 aa34.06■■■■□ 3.04
PCDHB4-202ENST00000623478 LRRIQ1Q96JM4 1722 aa34.04■■■■□ 3.04
PCDHB4-202ENST00000623478 CLIP1P30622 1438 aa34.04■■■■□ 3.04
PCDHB4-202ENST00000623478 PCF11O94913 1555 aaKnown RBP34.03■■■■□ 3.04
PCDHB4-202ENST00000623478 NEO1Q92859 1461 aa34.02■■■■□ 3.04
PCDHB4-202ENST00000623478 KDM4FA0A1W2PPD8 638 aa34.02■■■■□ 3.04
PCDHB4-202ENST00000623478 PHLDB1Q86UU1 1377 aa33.99■■■■□ 3.03
PCDHB4-202ENST00000623478 CASKIN1Q8WXD9 1431 aa33.97■■■■□ 3.03
PCDHB4-202ENST00000623478 CDK11AQ9UQ88 783 aaPredicted RBP33.92■■■■□ 3.02
PCDHB4-202ENST00000623478 FANCAO15360 1455 aa33.92■■■■□ 3.02
PCDHB4-202ENST00000623478 KIF14Q15058 1648 aa33.92■■■■□ 3.02
PCDHB4-202ENST00000623478 ADGRL1O94910 1474 aa33.91■■■■□ 3.02
PCDHB4-202ENST00000623478 RAPGEF3O95398 923 aa33.9■■■■□ 3.02
PCDHB4-202ENST00000623478 TROQ12816 1431 aaPredicted RBP33.89■■■■□ 3.02
PCDHB4-202ENST00000623478 FRMPD1Q5SYB0 1578 aa33.89■■■■□ 3.02
PCDHB4-202ENST00000623478 CFAP74Q9C0B2 1584 aa33.88■■■■□ 3.01
PCDHB4-202ENST00000623478 FYCO1Q9BQS8 1478 aa33.88■■■■□ 3.01
PCDHB4-202ENST00000623478 CCDC18Q5T9S5 1454 aa33.87■■■■□ 3.01
PCDHB4-202ENST00000623478 AKNAQ7Z591 1439 aa33.87■■■■□ 3.01
PCDHB4-202ENST00000623478 PLCH2O75038 1416 aa33.83■■■■□ 3.01
PCDHB4-202ENST00000623478 MYO5CQ9NQX4 1742 aa33.81■■■■□ 3
PCDHB4-202ENST00000623478 CEP162Q5TB80 1403 aa33.8■■■■□ 3
PCDHB4-202ENST00000623478 DENND4BO75064 1496 aaPredicted RBP33.79■■■■□ 3
PCDHB4-202ENST00000623478 RICTORQ6R327 1708 aa33.78■■■■□ 3
PCDHB4-202ENST00000623478 LOC105371045A0A1W2PR82 267 aa33.71■■■□□ 2.99
PCDHB4-202ENST00000623478 ARHGAP5Q13017 1502 aa33.69■■■□□ 2.98
PCDHB4-202ENST00000623478 EFCAB2Q5VUJ9 269 aa33.67■■■□□ 2.98
PCDHB4-202ENST00000623478 SCAPERQ9BY12 1400 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms