RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 CTTNBP2Q8WZ74 1663 aa28.61■■■□□ 2.17
PCDHB2-202ENST00000622947 GRIN2BQ13224 1484 aa28.56■■■□□ 2.16
PCDHB2-202ENST00000622947 ADAMTS12P58397 1594 aa28.54■■■□□ 2.16
PCDHB2-202ENST00000622947 EIF4G3O43432 1585 aaKnown RBP28.53■■■□□ 2.16
PCDHB2-202ENST00000622947 FHAD1B1AJZ9 1412 aa28.52■■■□□ 2.16
PCDHB2-202ENST00000622947 APLP2Q06481 763 aa28.46■■■□□ 2.15
PCDHB2-202ENST00000622947 P3H3Q8IVL6 736 aa28.46■■■□□ 2.15
PCDHB2-202ENST00000622947 SNAPC4Q5SXM2 1469 aa28.41■■■□□ 2.14
PCDHB2-202ENST00000622947 EFCAB5A4FU69 1503 aa28.41■■■□□ 2.14
PCDHB2-202ENST00000622947 FHOD3Q2V2M9 1422 aa28.41■■■□□ 2.14
PCDHB2-202ENST00000622947 KANK4Q5T7N3 995 aaPredicted RBP28.4■■■□□ 2.14
PCDHB2-202ENST00000622947 SAMD9Q5K651 1589 aa28.35■■■□□ 2.13
PCDHB2-202ENST00000622947 PCF11O94913 1555 aaKnown RBP28.31■■■□□ 2.12
PCDHB2-202ENST00000622947 MAGI1Q96QZ7 1491 aaPredicted RBP28.27■■■□□ 2.12
PCDHB2-202ENST00000622947 IQGAP2Q13576 1575 aa28.26■■■□□ 2.12
PCDHB2-202ENST00000622947 GRIN2AQ12879 1464 aa28.26■■■□□ 2.12
PCDHB2-202ENST00000622947 TIAM1Q13009 1591 aa28.24■■■□□ 2.11
PCDHB2-202ENST00000622947 MAP3K1Q13233 1512 aa28.21■■■□□ 2.11
PCDHB2-202ENST00000622947 SYNJ2O15056 1496 aa28.19■■■□□ 2.1
PCDHB2-202ENST00000622947 CASKIN1Q8WXD9 1431 aa28.19■■■□□ 2.1
PCDHB2-202ENST00000622947 FYCO1Q9BQS8 1478 aa28.17■■■□□ 2.1
PCDHB2-202ENST00000622947 FMN1Q68DA7 1419 aa28.17■■■□□ 2.1
PCDHB2-202ENST00000622947 KIAA0586Q9BVV6 1533 aa28.15■■■□□ 2.1
PCDHB2-202ENST00000622947 CFAP43Q8NDM7 1665 aa28.15■■■□□ 2.1
PCDHB2-202ENST00000622947 CHMP7Q8WUX9 453 aaPredicted RBP28.14■■■□□ 2.1
PCDHB2-202ENST00000622947 ATP1B4Q9UN42 357 aaPredicted RBP28.13■■■□□ 2.09
PCDHB2-202ENST00000622947 CEP170Q5SW79 1584 aa28.13■■■□□ 2.09
PCDHB2-202ENST00000622947 UGGT2Q9NYU1 1516 aa28.13■■■□□ 2.09
PCDHB2-202ENST00000622947 LRRC9Q6ZRR7 1453 aa28.12■■■□□ 2.09
PCDHB2-202ENST00000622947 FBLN2P98095 1184 aa28.1■■■□□ 2.09
PCDHB2-202ENST00000622947 LRRIQ1Q96JM4 1722 aa28.09■■■□□ 2.09
PCDHB2-202ENST00000622947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.06■■■□□ 2.08
PCDHB2-202ENST00000622947 HNRNPUL2Q1KMD3 747 aaKnown RBP28.04■■■□□ 2.08
PCDHB2-202ENST00000622947 DISP1Q96F81 1524 aa28.04■■■□□ 2.08
PCDHB2-202ENST00000622947 NUP160Q12769 1436 aa28.04■■■□□ 2.08
PCDHB2-202ENST00000622947 RRBP1Q9P2E9 1410 aaKnown RBP28.03■■■□□ 2.08
PCDHB2-202ENST00000622947 KIAA0556O60303 1618 aa28■■■□□ 2.07
PCDHB2-202ENST00000622947 PHLDB1Q86UU1 1377 aa27.94■■■□□ 2.06
PCDHB2-202ENST00000622947 CCNB3Q8WWL7 1395 aa27.91■■■□□ 2.06
PCDHB2-202ENST00000622947 ZEB1P37275 1124 aaPredicted RBP27.91■■■□□ 2.06
PCDHB2-202ENST00000622947 CHD1O14646 1710 aa27.89■■■□□ 2.06
PCDHB2-202ENST00000622947 CCER1Q8TC90 406 aaPredicted RBP27.88■■■□□ 2.05
PCDHB2-202ENST00000622947 JPH4Q96JJ6 628 aa27.87■■■□□ 2.05
PCDHB2-202ENST00000622947 HECW1Q76N89 1606 aa27.86■■■□□ 2.05
PCDHB2-202ENST00000622947 MYT1Q01538 1121 aa27.84■■■□□ 2.05
PCDHB2-202ENST00000622947 MAGI3Q5TCQ9 1506 aa27.84■■■□□ 2.05
PCDHB2-202ENST00000622947 EPRSP07814 1512 aaKnown RBP27.82■■■□□ 2.04
PCDHB2-202ENST00000622947 MTUS2Q5JR59 1369 aa27.81■■■□□ 2.04
PCDHB2-202ENST00000622947 CCDC18Q5T9S5 1454 aa27.8■■■□□ 2.04
PCDHB2-202ENST00000622947 CDK13Q14004 1512 aaKnown RBP27.8■■■□□ 2.04
PCDHB2-202ENST00000622947 ARID3CA6NKF2 412 aa27.76■■■□□ 2.03
PCDHB2-202ENST00000622947 RAPGEF6Q8TEU7 1601 aa27.75■■■□□ 2.03
PCDHB2-202ENST00000622947 NUP153P49790 1475 aaKnown RBP27.74■■■□□ 2.03
PCDHB2-202ENST00000622947 EHBP1L1Q8N3D4 1523 aa27.74■■■□□ 2.03
PCDHB2-202ENST00000622947 CARMIL2Q6F5E8 1435 aa27.73■■■□□ 2.03
PCDHB2-202ENST00000622947 NCOA2Q15596 1464 aa27.72■■■□□ 2.03
PCDHB2-202ENST00000622947 ITGAEP38570 1179 aa27.71■■■□□ 2.03
PCDHB2-202ENST00000622947 PLB1Q6P1J6 1458 aa27.71■■■□□ 2.03
PCDHB2-202ENST00000622947 SUPT6HQ7KZ85 1726 aaKnown RBP27.7■■■□□ 2.02
PCDHB2-202ENST00000622947 ARHGEF11O15085 1522 aa27.67■■■□□ 2.02
PCDHB2-202ENST00000622947 FAM50AQ14320 339 aaKnown RBP27.66■■■□□ 2.02
PCDHB2-202ENST00000622947 FGD6Q6ZV73 1430 aa27.66■■■□□ 2.02
PCDHB2-202ENST00000622947 PRG4Q92954 1404 aaPredicted RBP27.66■■■□□ 2.02
PCDHB2-202ENST00000622947 SCAF1Q9H7N4 1312 aaKnown RBP27.63■■■□□ 2.01
PCDHB2-202ENST00000622947 SHROOM2Q13796 1616 aa27.62■■■□□ 2.01
PCDHB2-202ENST00000622947 MYOM3Q5VTT5 1437 aa27.6■■■□□ 2.01
PCDHB2-202ENST00000622947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.58■■■□□ 2.01
PCDHB2-202ENST00000622947 ABCA8O94911 1581 aa27.57■■■□□ 2
PCDHB2-202ENST00000622947 ERCC6L2Q5T890 1561 aa27.54■■■□□ 2
PCDHB2-202ENST00000622947 CLASP1Q7Z460 1538 aa27.52■■■□□ 2
PCDHB2-202ENST00000622947 DHX57Q6P158 1386 aaKnown RBP27.49■■□□□ 1.99
PCDHB2-202ENST00000622947 PTPRGP23470 1445 aa27.49■■□□□ 1.99
PCDHB2-202ENST00000622947 PTPN23Q9H3S7 1636 aa27.49■■□□□ 1.99
PCDHB2-202ENST00000622947 PTPRKQ15262 1439 aa27.47■■□□□ 1.99
PCDHB2-202ENST00000622947 RAB3GAP2Q9H2M9 1393 aa27.47■■□□□ 1.99
PCDHB2-202ENST00000622947 ATP10BO94823 1461 aa27.44■■□□□ 1.98
PCDHB2-202ENST00000622947 SETD5Q9C0A6 1442 aa27.44■■□□□ 1.98
PCDHB2-202ENST00000622947 TROQ12816 1431 aaPredicted RBP27.43■■□□□ 1.98
PCDHB2-202ENST00000622947 CDK11AQ9UQ88 783 aaPredicted RBP27.43■■□□□ 1.98
PCDHB2-202ENST00000622947 TCOF1Q13428 1488 aaKnown RBP27.42■■□□□ 1.98
PCDHB2-202ENST00000622947 KIF14Q15058 1648 aa27.39■■□□□ 1.98
PCDHB2-202ENST00000622947 MIA2Q96PC5 1412 aa27.37■■□□□ 1.97
PCDHB2-202ENST00000622947 ADCY10Q96PN6 1610 aa27.35■■□□□ 1.97
PCDHB2-202ENST00000622947 UACAQ9BZF9 1416 aa27.33■■□□□ 1.97
PCDHB2-202ENST00000622947 ZNF644Q9H582 1327 aaPredicted RBP27.28■■□□□ 1.96
PCDHB2-202ENST00000622947 CLSPNQ9HAW4 1339 aa27.28■■□□□ 1.96
PCDHB2-202ENST00000622947 PLEKHD1A6NEE1 506 aa27.28■■□□□ 1.96
PCDHB2-202ENST00000622947 GPATCH8Q9UKJ3 1502 aaKnown RBP27.27■■□□□ 1.96
PCDHB2-202ENST00000622947 HFM1A2PYH4 1435 aa27.27■■□□□ 1.96
PCDHB2-202ENST00000622947 ABCC2Q92887 1545 aa27.24■■□□□ 1.95
PCDHB2-202ENST00000622947 NAIPQ13075 1403 aa27.24■■□□□ 1.95
PCDHB2-202ENST00000622947 MAPKBP1O60336 1514 aa27.23■■□□□ 1.95
PCDHB2-202ENST00000622947 ABCC10Q5T3U5 1492 aa27.23■■□□□ 1.95
PCDHB2-202ENST00000622947 ITSN2Q9NZM3 1697 aa27.21■■□□□ 1.95
PCDHB2-202ENST00000622947 CHIC2Q9UKJ5 165 aa27.21■■□□□ 1.95
PCDHB2-202ENST00000622947 CDC42BPAQ5VT25 1732 aa27.2■■□□□ 1.94
PCDHB2-202ENST00000622947 CFDP1Q9UEE9 299 aaPredicted RBP27.17■■□□□ 1.94
PCDHB2-202ENST00000622947 DNMT1P26358 1616 aaKnown RBP27.17■■□□□ 1.94
PCDHB2-202ENST00000622947 ABCC5O15440 1437 aa27.16■■□□□ 1.94
PCDHB2-202ENST00000622947 DAPK1P53355 1430 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms