RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 BAZ1AQ9NRL2 1556 aaPredicted RBP9.53□□□□□ -0.88
RPRD1B-209ENST00000622494 WIZO95785 1651 aa9.52□□□□□ -0.89
RPRD1B-209ENST00000622494 PLEKHG5O94827 1062 aa9.52□□□□□ -0.89
RPRD1B-209ENST00000622494 PRKAR2AP13861 404 aaKnown RBP9.52□□□□□ -0.89
RPRD1B-209ENST00000622494 CHADLQ6NUI6 762 aa9.51□□□□□ -0.89
RPRD1B-209ENST00000622494 ZBTB47Q9UFB7 747 aaPredicted RBP9.51□□□□□ -0.89
RPRD1B-209ENST00000622494 SMARCA2P51531 1590 aa9.5□□□□□ -0.89
RPRD1B-209ENST00000622494 BAZ1BQ9UIG0 1483 aaKnown RBP9.49□□□□□ -0.89
RPRD1B-209ENST00000622494 HMGXB3Q12766 1538 aa9.49□□□□□ -0.89
RPRD1B-209ENST00000622494 PEG3Q9GZU2 1588 aa9.46□□□□□ -0.89
RPRD1B-209ENST00000622494 KLHL34Q8N239 644 aa9.46□□□□□ -0.9
RPRD1B-209ENST00000622494 FARP1Q9Y4F1 1045 aaPredicted RBP9.46□□□□□ -0.9
RPRD1B-209ENST00000622494 SPOCK2Q92563 424 aa9.45□□□□□ -0.9
RPRD1B-209ENST00000622494 NUBP1P53384 320 aa9.43□□□□□ -0.9
RPRD1B-209ENST00000622494 KIF21AQ7Z4S6 1674 aa9.42□□□□□ -0.9
RPRD1B-209ENST00000622494 NPM1P06748 294 aaKnown RBP eCLIP9.41□□□□□ -0.9
RPRD1B-209ENST00000622494 ERCC6Q03468 1493 aa9.4□□□□□ -0.9
RPRD1B-209ENST00000622494 AMER1Q5JTC6 1135 aaPredicted RBP9.38□□□□□ -0.91
RPRD1B-209ENST00000622494 RSF1Q96T23 1441 aaPredicted RBP9.38□□□□□ -0.91
RPRD1B-209ENST00000622494 THOC2Q8NI27 1593 aaKnown RBP9.37□□□□□ -0.91
RPRD1B-209ENST00000622494 RASEFQ8IZ41 740 aa9.35□□□□□ -0.91
RPRD1B-209ENST00000622494 RTN4Q9NQC3 1192 aaKnown RBP9.34□□□□□ -0.91
RPRD1B-209ENST00000622494 POTEHQ6S545 545 aa9.32□□□□□ -0.92
RPRD1B-209ENST00000622494 LAMC3Q9Y6N6 1575 aa9.31□□□□□ -0.92
RPRD1B-209ENST00000622494 TOP2AP11388 1531 aaKnown RBP9.31□□□□□ -0.92
RPRD1B-209ENST00000622494 C19orf67A6NJJ6 358 aa9.3□□□□□ -0.92
RPRD1B-209ENST00000622494 PKD2Q13563 968 aa9.3□□□□□ -0.92
RPRD1B-209ENST00000622494 GSE1Q14687 1217 aa9.29□□□□□ -0.92
RPRD1B-209ENST00000622494 FAM212AQ96EL1 285 aa9.29□□□□□ -0.92
RPRD1B-209ENST00000622494 CUX2O14529 1486 aa9.28□□□□□ -0.92
RPRD1B-209ENST00000622494 CADPSQ9ULU8 1353 aa9.26□□□□□ -0.93
RPRD1B-209ENST00000622494 CD44P16070 742 aaKnown RBP9.25□□□□□ -0.93
RPRD1B-209ENST00000622494 DCAF8Q5TAQ9 597 aa9.25□□□□□ -0.93
RPRD1B-209ENST00000622494 CIZ1Q9ULV3 898 aaPredicted RBP9.24□□□□□ -0.93
RPRD1B-209ENST00000622494 CCDC61Q9Y6R9 512 aa9.24□□□□□ -0.93
RPRD1B-209ENST00000622494 CCDC88BA6NC98 1476 aa9.23□□□□□ -0.93
RPRD1B-209ENST00000622494 TRIM41Q8WV44 630 aa9.23□□□□□ -0.93
RPRD1B-209ENST00000622494 TSPYL2Q9H2G4 693 aaPredicted RBP9.23□□□□□ -0.93
RPRD1B-209ENST00000622494 PDS5BQ9NTI5 1447 aa9.22□□□□□ -0.93
RPRD1B-209ENST00000622494 PAK3O75914 559 aaPredicted RBP9.21□□□□□ -0.94
RPRD1B-209ENST00000622494 CHRM1P11229 460 aaPredicted RBP9.21□□□□□ -0.94
RPRD1B-209ENST00000622494 FANCD2Q9BXW9 1451 aa9.21□□□□□ -0.94
RPRD1B-209ENST00000622494 MRC2Q9UBG0 1479 aa9.21□□□□□ -0.94
RPRD1B-209ENST00000622494 DNAJC5Q9H3Z4 198 aa9.19□□□□□ -0.94
RPRD1B-209ENST00000622494 ZRANB1Q9UGI0 708 aa9.19□□□□□ -0.94
RPRD1B-209ENST00000622494 CFTRP13569 1480 aa9.19□□□□□ -0.94
RPRD1B-209ENST00000622494 WDR62O43379 1518 aa9.19□□□□□ -0.94
RPRD1B-209ENST00000622494 URB2Q14146 1524 aaKnown RBP9.19□□□□□ -0.94
RPRD1B-209ENST00000622494 HAX1O00165 279 aa9.18□□□□□ -0.94
RPRD1B-209ENST00000622494 EVX2Q03828 476 aa9.18□□□□□ -0.94
RPRD1B-209ENST00000622494 PRDM2Q13029 1718 aa9.18□□□□□ -0.94
RPRD1B-209ENST00000622494 ZNF579Q8NAF0 562 aaKnown RBP9.18□□□□□ -0.94
RPRD1B-209ENST00000622494 CEP164Q9UPV0 1460 aa9.18□□□□□ -0.94
RPRD1B-209ENST00000622494 ECM2O94769 699 aaPredicted RBP9.17□□□□□ -0.94
RPRD1B-209ENST00000622494 PYGBP11216 843 aa9.14□□□□□ -0.95
RPRD1B-209ENST00000622494 KIF12Q96FN5 646 aa9.14□□□□□ -0.95
RPRD1B-209ENST00000622494 RNF25Q96BH1 459 aaPredicted RBP9.12□□□□□ -0.95
RPRD1B-209ENST00000622494 PHF12Q96QT6 1004 aa9.12□□□□□ -0.95
RPRD1B-209ENST00000622494 SGIP1Q9BQI5 828 aa9.12□□□□□ -0.95
RPRD1B-209ENST00000622494 RGL2O15211 777 aa9.11□□□□□ -0.95
RPRD1B-209ENST00000622494 SUPT5HO00267 1087 aaKnown RBP9.1□□□□□ -0.95
RPRD1B-209ENST00000622494 MAP3K13O43283 966 aa9.09□□□□□ -0.95
RPRD1B-209ENST00000622494 ZNF608Q9ULD9 1512 aaPredicted RBP9.09□□□□□ -0.95
RPRD1B-209ENST00000622494 CLCN6P51797 869 aa9.08□□□□□ -0.96
RPRD1B-209ENST00000622494 TOPBP1Q92547 1522 aa9.06□□□□□ -0.96
RPRD1B-209ENST00000622494 RIOK3O14730 519 aaKnown RBP9.06□□□□□ -0.96
RPRD1B-209ENST00000622494 ZNF467Q7Z7K2 595 aaPredicted RBP9.05□□□□□ -0.96
RPRD1B-209ENST00000622494 PCDHB13Q9Y5F0 798 aa9.05□□□□□ -0.96
RPRD1B-209ENST00000622494 IFNL1Q8IU54 200 aa9.04□□□□□ -0.96
RPRD1B-209ENST00000622494 MS4A3Q96HJ5 214 aa9.03□□□□□ -0.96
RPRD1B-209ENST00000622494 DNMBPQ6XZF7 1577 aa9.03□□□□□ -0.96
RPRD1B-209ENST00000622494 PCDHB8Q9UN66 801 aa9.02□□□□□ -0.97
RPRD1B-209ENST00000622494 RAD54L2Q9Y4B4 1467 aa9.02□□□□□ -0.97
RPRD1B-209ENST00000622494 VGFO15240 615 aaPredicted RBP9.01□□□□□ -0.97
RPRD1B-209ENST00000622494 EIF4G3O43432 1585 aaKnown RBP9.01□□□□□ -0.97
RPRD1B-209ENST00000622494 TARBP1Q13395 1621 aaKnown RBP9.01□□□□□ -0.97
RPRD1B-209ENST00000622494 GALR2O43603 387 aaPredicted RBP9□□□□□ -0.97
RPRD1B-209ENST00000622494 SP7Q8TDD2 431 aaPredicted RBP9□□□□□ -0.97
RPRD1B-209ENST00000622494 CUX1P39880 1505 aa9□□□□□ -0.97
RPRD1B-209ENST00000622494 GABBR2O75899 941 aa8.99□□□□□ -0.97
RPRD1B-209ENST00000622494 TAOK2Q9UL54 1235 aa8.99□□□□□ -0.97
RPRD1B-209ENST00000622494 AQRO60306 1485 aaKnown RBP eCLIP8.98□□□□□ -0.97
RPRD1B-209ENST00000622494 POLA1P09884 1462 aaPredicted RBP8.98□□□□□ -0.97
RPRD1B-209ENST00000622494 PDAP1Q13442 181 aaKnown RBP8.97□□□□□ -0.97
RPRD1B-209ENST00000622494 CHD1O14646 1710 aa8.97□□□□□ -0.97
RPRD1B-209ENST00000622494 IFT140Q96RY7 1462 aa8.96□□□□□ -0.97
RPRD1B-209ENST00000622494 TRPC6Q9Y210 931 aa8.96□□□□□ -0.98
RPRD1B-209ENST00000622494 FGD5Q6ZNL6 1462 aa8.96□□□□□ -0.98
RPRD1B-209ENST00000622494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.95□□□□□ -0.98
RPRD1B-209ENST00000622494 HS6ST3Q8IZP7 471 aa8.95□□□□□ -0.98
RPRD1B-209ENST00000622494 ZFP91Q96JP5 570 aaPredicted RBP8.95□□□□□ -0.98
RPRD1B-209ENST00000622494 ABCC8Q09428 1581 aa8.95□□□□□ -0.98
RPRD1B-209ENST00000622494 TIE1P35590 1138 aa8.94□□□□□ -0.98
RPRD1B-209ENST00000622494 PSEN1P49768 467 aa8.94□□□□□ -0.98
RPRD1B-209ENST00000622494 TDRD9Q8NDG6 1382 aaKnown RBP8.93□□□□□ -0.98
RPRD1B-209ENST00000622494 WDR97A6NE52 1622 aa8.92□□□□□ -0.98
RPRD1B-209ENST00000622494 SYNJ1O43426 1573 aa8.91□□□□□ -0.98
RPRD1B-209ENST00000622494 SOGA1O94964 1423 aa8.9□□□□□ -0.98
RPRD1B-209ENST00000622494 CHGAP10645 457 aaKnown RBP8.9□□□□□ -0.98
RPRD1B-209ENST00000622494 BMP2KQ9NSY1 1161 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms