RNA–Protein interactions for RNA: ENST00000621534.4

PSMD13-215, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 5 BASIC

Gene PSMD13, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-215ENST00000621534 RAPGEF2Q9Y4G8 1499 aa24.6■■□□□ 1.53
PSMD13-215ENST00000621534 ERICH3Q5RHP9 1530 aa24.59■■□□□ 1.53
PSMD13-215ENST00000621534 CUL7Q14999 1698 aa24.56■■□□□ 1.52
PSMD13-215ENST00000621534 CARMIL1Q5VZK9 1371 aa24.53■■□□□ 1.52
PSMD13-215ENST00000621534 GRIN2AQ12879 1464 aa24.52■■□□□ 1.52
PSMD13-215ENST00000621534 ADAMTS12P58397 1594 aa24.5■■□□□ 1.51
PSMD13-215ENST00000621534 TNIKQ9UKE5 1360 aa24.46■■□□□ 1.51
PSMD13-215ENST00000621534 UBTFP17480 764 aaKnown RBP24.45■■□□□ 1.5
PSMD13-215ENST00000621534 CEP170Q5SW79 1584 aa24.44■■□□□ 1.5
PSMD13-215ENST00000621534 NUP160Q12769 1436 aa24.44■■□□□ 1.5
PSMD13-215ENST00000621534 ERCC6L2Q5T890 1561 aa24.44■■□□□ 1.5
PSMD13-215ENST00000621534 FHAD1B1AJZ9 1412 aa24.42■■□□□ 1.5
PSMD13-215ENST00000621534 CEP162Q5TB80 1403 aa24.34■■□□□ 1.49
PSMD13-215ENST00000621534 SHROOM2Q13796 1616 aa24.33■■□□□ 1.48
PSMD13-215ENST00000621534 CTTNBP2Q8WZ74 1663 aa24.27■■□□□ 1.48
PSMD13-215ENST00000621534 PRG4Q92954 1404 aaPredicted RBP24.23■■□□□ 1.47
PSMD13-215ENST00000621534 CLIP1P30622 1438 aa24.21■■□□□ 1.47
PSMD13-215ENST00000621534 JPH4Q96JJ6 628 aa24.2■■□□□ 1.47
PSMD13-215ENST00000621534 RANGAP1P46060 587 aaPredicted RBP24.16■■□□□ 1.46
PSMD13-215ENST00000621534 ARHGAP35Q9NRY4 1499 aa24.09■■□□□ 1.45
PSMD13-215ENST00000621534 IQGAP2Q13576 1575 aa24.08■■□□□ 1.44
PSMD13-215ENST00000621534 AEBP2Q6ZN18 517 aaPredicted RBP24.07■■□□□ 1.44
PSMD13-215ENST00000621534 KIF13AQ9H1H9 1805 aa24.04■■□□□ 1.44
PSMD13-215ENST00000621534 KIAA0586Q9BVV6 1533 aa24.04■■□□□ 1.44
PSMD13-215ENST00000621534 EFCAB5A4FU69 1503 aa24.01■■□□□ 1.43
PSMD13-215ENST00000621534 SAMD9Q5K651 1589 aa24■■□□□ 1.43
PSMD13-215ENST00000621534 NPM1P06748 294 aaKnown RBP eCLIP23.98■■□□□ 1.43
PSMD13-215ENST00000621534 UGGT2Q9NYU1 1516 aa23.96■■□□□ 1.43
PSMD13-215ENST00000621534 VPS8Q8N3P4 1428 aa23.95■■□□□ 1.43
PSMD13-215ENST00000621534 ADCY10Q96PN6 1610 aa23.95■■□□□ 1.42
PSMD13-215ENST00000621534 FAM69CQ0P6D2 419 aa23.94■■□□□ 1.42
PSMD13-215ENST00000621534 MAPKBP1O60336 1514 aa23.93■■□□□ 1.42
PSMD13-215ENST00000621534 ABCC10Q5T3U5 1492 aa23.93■■□□□ 1.42
PSMD13-215ENST00000621534 FHOD3Q2V2M9 1422 aa23.92■■□□□ 1.42
PSMD13-215ENST00000621534 P3H3Q8IVL6 736 aa23.9■■□□□ 1.42
PSMD13-215ENST00000621534 DIP2BQ9P265 1576 aa23.87■■□□□ 1.41
PSMD13-215ENST00000621534 DISP1Q96F81 1524 aa23.86■■□□□ 1.41
PSMD13-215ENST00000621534 KIAA0556O60303 1618 aa23.86■■□□□ 1.41
PSMD13-215ENST00000621534 PTPRGP23470 1445 aa23.83■■□□□ 1.41
PSMD13-215ENST00000621534 TTBK1Q5TCY1 1321 aaPredicted RBP23.83■■□□□ 1.41
PSMD13-215ENST00000621534 PCF11O94913 1555 aaKnown RBP23.79■■□□□ 1.4
PSMD13-215ENST00000621534 CARMIL2Q6F5E8 1435 aa23.79■■□□□ 1.4
PSMD13-215ENST00000621534 FMN1Q68DA7 1419 aa23.74■■□□□ 1.39
PSMD13-215ENST00000621534 TSPOAP1O95153 1857 aa23.73■■□□□ 1.39
PSMD13-215ENST00000621534 ABCC2Q92887 1545 aa23.71■■□□□ 1.39
PSMD13-215ENST00000621534 FYCO1Q9BQS8 1478 aa23.69■■□□□ 1.38
PSMD13-215ENST00000621534 CASKIN1Q8WXD9 1431 aa23.69■■□□□ 1.38
PSMD13-215ENST00000621534 KDM6BO15054 1643 aa23.69■■□□□ 1.38
PSMD13-215ENST00000621534 PPARGC1BQ86YN6 1023 aaKnown RBP23.68■■□□□ 1.38
PSMD13-215ENST00000621534 ASXL2Q76L83 1435 aa23.65■■□□□ 1.38
PSMD13-215ENST00000621534 UACAQ9BZF9 1416 aa23.64■■□□□ 1.38
PSMD13-215ENST00000621534 UHRF1BP1LA0JNW5 1464 aa23.64■■□□□ 1.37
PSMD13-215ENST00000621534 LRRIQ1Q96JM4 1722 aa23.63■■□□□ 1.37
PSMD13-215ENST00000621534 PLB1Q6P1J6 1458 aa23.62■■□□□ 1.37
PSMD13-215ENST00000621534 CFAP43Q8NDM7 1665 aa23.61■■□□□ 1.37
PSMD13-215ENST00000621534 TIAM1Q13009 1591 aa23.6■■□□□ 1.37
PSMD13-215ENST00000621534 HECW1Q76N89 1606 aa23.59■■□□□ 1.37
PSMD13-215ENST00000621534 RAPGEF6Q8TEU7 1601 aa23.58■■□□□ 1.37
PSMD13-215ENST00000621534 APLP2Q06481 763 aa23.58■■□□□ 1.37
PSMD13-215ENST00000621534 MAP3K1Q13233 1512 aa23.58■■□□□ 1.37
PSMD13-215ENST00000621534 GLI2P10070 1586 aa23.57■■□□□ 1.36
PSMD13-215ENST00000621534 ATP1B4Q9UN42 357 aaPredicted RBP23.57■■□□□ 1.36
PSMD13-215ENST00000621534 KDM5BQ9UGL1 1544 aa23.54■■□□□ 1.36
PSMD13-215ENST00000621534 ABCA8O94911 1581 aa23.53■■□□□ 1.36
PSMD13-215ENST00000621534 PPRC1Q5VV67 1664 aaKnown RBP23.53■■□□□ 1.36
PSMD13-215ENST00000621534 KDM4FA0A1W2PPD8 638 aa23.52■■□□□ 1.36
PSMD13-215ENST00000621534 KANK4Q5T7N3 995 aaPredicted RBP23.52■■□□□ 1.36
PSMD13-215ENST00000621534 NUP153P49790 1475 aaKnown RBP23.52■■□□□ 1.36
PSMD13-215ENST00000621534 EPRSP07814 1512 aaKnown RBP23.5■■□□□ 1.35
PSMD13-215ENST00000621534 ZCCHC11Q5TAX3 1644 aaKnown RBP23.49■■□□□ 1.35
PSMD13-215ENST00000621534 CCDC18Q5T9S5 1454 aa23.48■■□□□ 1.35
PSMD13-215ENST00000621534 CDK13Q14004 1512 aaKnown RBP23.48■■□□□ 1.35
PSMD13-215ENST00000621534 LRRC9Q6ZRR7 1453 aa23.47■■□□□ 1.35
PSMD13-215ENST00000621534 MAP3K4Q9Y6R4 1608 aa23.44■■□□□ 1.34
PSMD13-215ENST00000621534 ARID3CA6NKF2 412 aa23.43■■□□□ 1.34
PSMD13-215ENST00000621534 MAGI3Q5TCQ9 1506 aa23.41■■□□□ 1.34
PSMD13-215ENST00000621534 COL17A1Q9UMD9 1497 aaPredicted RBP23.41■■□□□ 1.34
PSMD13-215ENST00000621534 WDR7Q9Y4E6 1490 aa23.4■■□□□ 1.34
PSMD13-215ENST00000621534 TEX14Q8IWB6 1497 aa23.39■■□□□ 1.33
PSMD13-215ENST00000621534 TRIM26Q12899 539 aaPredicted RBP23.38■■□□□ 1.33
PSMD13-215ENST00000621534 EHBP1L1Q8N3D4 1523 aa23.36■■□□□ 1.33
PSMD13-215ENST00000621534 MTUS2Q5JR59 1369 aa23.34■■□□□ 1.33
PSMD13-215ENST00000621534 ATP10BO94823 1461 aa23.33■■□□□ 1.33
PSMD13-215ENST00000621534 PCGF6Q9BYE7 350 aa23.31■■□□□ 1.32
PSMD13-215ENST00000621534 ADGRL1O94910 1474 aa23.31■■□□□ 1.32
PSMD13-215ENST00000621534 KCNH8Q96L42 1107 aa23.3■■□□□ 1.32
PSMD13-215ENST00000621534 SUPT6HQ7KZ85 1726 aaKnown RBP23.28■■□□□ 1.32
PSMD13-215ENST00000621534 CD109Q6YHK3 1445 aa23.27■■□□□ 1.32
PSMD13-215ENST00000621534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.27■■□□□ 1.32
PSMD13-215ENST00000621534 HNRNPUL2Q1KMD3 747 aaKnown RBP23.27■■□□□ 1.32
PSMD13-215ENST00000621534 PHLDB1Q86UU1 1377 aa23.26■■□□□ 1.31
PSMD13-215ENST00000621534 NCOA2Q15596 1464 aa23.25■■□□□ 1.31
PSMD13-215ENST00000621534 TROQ12816 1431 aaPredicted RBP23.22■■□□□ 1.31
PSMD13-215ENST00000621534 CDK11AQ9UQ88 783 aaPredicted RBP23.19■■□□□ 1.3
PSMD13-215ENST00000621534 RRBP1Q9P2E9 1410 aaKnown RBP23.19■■□□□ 1.3
PSMD13-215ENST00000621534 KIF14Q15058 1648 aa23.19■■□□□ 1.3
PSMD13-215ENST00000621534 PLEKHD1A6NEE1 506 aa23.13■■□□□ 1.29
PSMD13-215ENST00000621534 MYOM3Q5VTT5 1437 aa23.12■■□□□ 1.29
PSMD13-215ENST00000621534 CCNB3Q8WWL7 1395 aa23.11■■□□□ 1.29
PSMD13-215ENST00000621534 FGD6Q6ZV73 1430 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms