RNA–Protein interactions for RNA: ENST00000621189.4

RECQL4-210, Transcript of RecQ like helicase 4, humanhuman

TSL 1 (best) BASIC

Gene RECQL4, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-210ENST00000621189 TSHZ2Q9NRE2 1034 aa23.09■■□□□ 1.29
RECQL4-210ENST00000621189 CUX2O14529 1486 aa23.08■■□□□ 1.29
RECQL4-210ENST00000621189 CLSPNQ9HAW4 1339 aa23.06■■□□□ 1.28
RECQL4-210ENST00000621189 MRS2Q9HD23 443 aa23.05■■□□□ 1.28
RECQL4-210ENST00000621189 FOXD1Q16676 465 aa23.05■■□□□ 1.28
RECQL4-210ENST00000621189 CARMIL1Q5VZK9 1371 aa23.02■■□□□ 1.28
RECQL4-210ENST00000621189 ATAD2BQ9ULI0 1458 aa23.02■■□□□ 1.28
RECQL4-210ENST00000621189 MYT1LQ9UL68 1186 aa23.01■■□□□ 1.27
RECQL4-210ENST00000621189 ANP32EQ9BTT0 268 aa22.97■■□□□ 1.27
RECQL4-210ENST00000621189 NPM2Q86SE8 214 aaKnown RBP22.97■■□□□ 1.27
RECQL4-210ENST00000621189 SYNJ1O43426 1573 aa22.96■■□□□ 1.27
RECQL4-210ENST00000621189 KDM2AQ9Y2K7 1162 aa22.95■■□□□ 1.26
RECQL4-210ENST00000621189 SETD5Q9C0A6 1442 aa22.95■■□□□ 1.26
RECQL4-210ENST00000621189 NBR1Q14596 966 aa22.92■■□□□ 1.26
RECQL4-210ENST00000621189 KIF21BO75037 1637 aa22.92■■□□□ 1.26
RECQL4-210ENST00000621189 EIF4G2P78344 907 aaKnown RBP eCLIP22.91■■□□□ 1.26
RECQL4-210ENST00000621189 RBM19Q9Y4C8 960 aaKnown RBP22.89■■□□□ 1.25
RECQL4-210ENST00000621189 B4GALNT3Q6L9W6 998 aa22.87■■□□□ 1.25
RECQL4-210ENST00000621189 PPP1R15AO75807 674 aaPredicted RBP22.87■■□□□ 1.25
RECQL4-210ENST00000621189 SLC4A1APQ9BWU0 796 aaKnown RBP22.86■■□□□ 1.25
RECQL4-210ENST00000621189 FHOD3Q2V2M9 1422 aa22.85■■□□□ 1.25
RECQL4-210ENST00000621189 ARAP1Q96P48 1450 aa22.83■■□□□ 1.24
RECQL4-210ENST00000621189 RTL5Q5HYW3 569 aaPredicted RBP22.81■■□□□ 1.24
RECQL4-210ENST00000621189 HSPA5P11021 654 aaKnown RBP22.8■■□□□ 1.24
RECQL4-210ENST00000621189 CCDC136Q96JN2 1154 aa22.77■■□□□ 1.24
RECQL4-210ENST00000621189 TDRD9Q8NDG6 1382 aaKnown RBP22.77■■□□□ 1.24
RECQL4-210ENST00000621189 TMC1Q8TDI8 760 aa22.76■■□□□ 1.23
RECQL4-210ENST00000621189 DAXXQ9UER7 740 aaPredicted RBP22.75■■□□□ 1.23
RECQL4-210ENST00000621189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.74■■□□□ 1.231e-6■■■□□ 15.4
RECQL4-210ENST00000621189 PHLDB1Q86UU1 1377 aa22.73■■□□□ 1.23
RECQL4-210ENST00000621189 BCL11AQ9H165 835 aa22.69■■□□□ 1.22
RECQL4-210ENST00000621189 FHAD1B1AJZ9 1412 aa22.68■■□□□ 1.22
RECQL4-210ENST00000621189 RGL3Q3MIN7 710 aa22.68■■□□□ 1.22
RECQL4-210ENST00000621189 IGF1RP08069 1367 aa22.68■■□□□ 1.22
RECQL4-210ENST00000621189 ARHGAP35Q9NRY4 1499 aa22.67■■□□□ 1.22
RECQL4-210ENST00000621189 CCER2I3L3R5 266 aa22.64■■□□□ 1.21
RECQL4-210ENST00000621189 ANP32AP39687 249 aaKnown RBP22.64■■□□□ 1.21
RECQL4-210ENST00000621189 L3MBTL2Q969R5 705 aa22.62■■□□□ 1.21
RECQL4-210ENST00000621189 EIF4G1Q04637 1599 aaKnown RBP22.6■■□□□ 1.21
RECQL4-210ENST00000621189 MPHOSPH9Q99550 1183 aa22.56■■□□□ 1.2
RECQL4-210ENST00000621189 SENP3Q9H4L4 574 aaPredicted RBP22.55■■□□□ 1.2
RECQL4-210ENST00000621189 CFDP1Q9UEE9 299 aaPredicted RBP22.55■■□□□ 1.2
RECQL4-210ENST00000621189 PPP4R2Q9NY27 417 aa22.54■■□□□ 1.2
RECQL4-210ENST00000621189 TIMELESSQ9UNS1 1208 aa22.54■■□□□ 1.2
RECQL4-210ENST00000621189 CADPSQ9ULU8 1353 aa22.53■■□□□ 1.2
RECQL4-210ENST00000621189 PRXQ9BXM0 1461 aa22.52■■□□□ 1.2
RECQL4-210ENST00000621189 RAD54L2Q9Y4B4 1467 aa22.52■■□□□ 1.2
RECQL4-210ENST00000621189 CHMP7Q8WUX9 453 aaPredicted RBP22.5■■□□□ 1.19
RECQL4-210ENST00000621189 CARD11Q9BXL7 1154 aa22.5■■□□□ 1.19
RECQL4-210ENST00000621189 RRBP1Q9P2E9 1410 aaKnown RBP22.49■■□□□ 1.19
RECQL4-210ENST00000621189 ZBTB47Q9UFB7 747 aaPredicted RBP22.47■■□□□ 1.19
RECQL4-210ENST00000621189 TSPY4P0CV99 314 aa22.47■■□□□ 1.19
RECQL4-210ENST00000621189 TSPY10P0CW01 314 aa22.47■■□□□ 1.19
RECQL4-210ENST00000621189 CCDC184Q52MB2 194 aa22.47■■□□□ 1.19
RECQL4-210ENST00000621189 FGD5Q6ZNL6 1462 aa22.45■■□□□ 1.18
RECQL4-210ENST00000621189 WDR97A6NE52 1622 aa22.44■■□□□ 1.18
RECQL4-210ENST00000621189 CUX1P39880 1505 aa22.44■■□□□ 1.18
RECQL4-210ENST00000621189 LRRC9Q6ZRR7 1453 aa22.43■■□□□ 1.18
RECQL4-210ENST00000621189 BICRAQ9NZM4 1560 aa22.4■■□□□ 1.18
RECQL4-210ENST00000621189 DCAF11Q8TEB1 546 aa22.4■■□□□ 1.18
RECQL4-210ENST00000621189 PKD2Q13563 968 aa22.4■■□□□ 1.18
RECQL4-210ENST00000621189 CC2D1BQ5T0F9 858 aaKnown RBP22.4■■□□□ 1.18
RECQL4-210ENST00000621189 ZNF644Q9H582 1327 aaPredicted RBP22.39■■□□□ 1.18
RECQL4-210ENST00000621189 LAS1LQ9Y4W2 734 aaKnown RBP22.39■■□□□ 1.17
RECQL4-210ENST00000621189 CCDC18Q5T9S5 1454 aa22.38■■□□□ 1.17
RECQL4-210ENST00000621189 TOP2BQ02880 1626 aa22.37■■□□□ 1.17
RECQL4-210ENST00000621189 WASHC2AQ641Q2 1341 aa22.36■■□□□ 1.17
RECQL4-210ENST00000621189 FMN1Q68DA7 1419 aa22.34■■□□□ 1.17
RECQL4-210ENST00000621189 PRKRIP1Q9H875 184 aaPredicted RBP22.34■■□□□ 1.17
RECQL4-210ENST00000621189 CHGAP10645 457 aaKnown RBP22.34■■□□□ 1.17
RECQL4-210ENST00000621189 CANXP27824 592 aaKnown RBP22.34■■□□□ 1.17
RECQL4-210ENST00000621189 RTN4Q9NQC3 1192 aaKnown RBP22.32■■□□□ 1.16
RECQL4-210ENST00000621189 PLEKHD1A6NEE1 506 aa22.32■■□□□ 1.16
RECQL4-210ENST00000621189 FANCD2Q9BXW9 1451 aa22.31■■□□□ 1.16
RECQL4-210ENST00000621189 ERICH3Q5RHP9 1530 aa22.3■■□□□ 1.16
RECQL4-210ENST00000621189 EIF5BO60841 1220 aaKnown RBP22.29■■□□□ 1.16
RECQL4-210ENST00000621189 FGD6Q6ZV73 1430 aa22.29■■□□□ 1.16
RECQL4-210ENST00000621189 NOP58Q9Y2X3 529 aaKnown RBP22.28■■□□□ 1.16
RECQL4-210ENST00000621189 ARXQ96QS3 562 aa22.27■■□□□ 1.16
RECQL4-210ENST00000621189 UNC13AQ9UPW8 1703 aa22.26■■□□□ 1.15
RECQL4-210ENST00000621189 NCAPD3P42695 1498 aa22.24■■□□□ 1.15
RECQL4-210ENST00000621189 DEKP35659 375 aaKnown RBP22.24■■□□□ 1.15
RECQL4-210ENST00000621189 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
RECQL4-210ENST00000621189 CFTRP13569 1480 aa22.22■■□□□ 1.15
RECQL4-210ENST00000621189 C11orf95C9JLR9 678 aaPredicted RBP22.22■■□□□ 1.15
RECQL4-210ENST00000621189 NESP48681 1621 aa22.21■■□□□ 1.15
RECQL4-210ENST00000621189 WDR43Q15061 677 aaKnown RBP eCLIP22.2■■□□□ 1.14
RECQL4-210ENST00000621189 NBPF8Q3BBV2 869 aa22.2■■□□□ 1.14
RECQL4-210ENST00000621189 NEUROD2Q15784 382 aa22.18■■□□□ 1.14
RECQL4-210ENST00000621189 ST20-MTHFSA0A0A6YYL1 179 aa22.17■■□□□ 1.14
RECQL4-210ENST00000621189 RGS3P49796 1198 aa22.17■■□□□ 1.14
RECQL4-210ENST00000621189 TIAM1Q13009 1591 aa22.17■■□□□ 1.14
RECQL4-210ENST00000621189 KIF7Q2M1P5 1343 aa22.16■■□□□ 1.14
RECQL4-210ENST00000621189 PLIN1O60240 522 aa22.15■■□□□ 1.14
RECQL4-210ENST00000621189 HNRNPMP52272 730 aaKnown RBP eCLIP22.15■■□□□ 1.14
RECQL4-210ENST00000621189 NUP155O75694 1391 aa22.15■■□□□ 1.14
RECQL4-210ENST00000621189 UACAQ9BZF9 1416 aa22.14■■□□□ 1.14
RECQL4-210ENST00000621189 TNNT2P45379 298 aaPredicted RBP22.14■■□□□ 1.14
RECQL4-210ENST00000621189 MSH5O43196 834 aa22.14■■□□□ 1.13
RECQL4-210ENST00000621189 NUDCQ9Y266 331 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms