RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 CARMIL1Q5VZK9 1371 aa35.21■■■■□ 3.23
SMC6-210ENST00000621152 CUL7Q14999 1698 aa35.15■■■■□ 3.22
SMC6-210ENST00000621152 RUSC2Q8N2Y8 1516 aa35.11■■■■□ 3.21
SMC6-210ENST00000621152 KIAA0586Q9BVV6 1533 aa35.11■■■■□ 3.21
SMC6-210ENST00000621152 NPM1P06748 294 aaKnown RBP eCLIP34.91■■■■□ 3.18
SMC6-210ENST00000621152 RAPGEF2Q9Y4G8 1499 aa34.86■■■■□ 3.17
SMC6-210ENST00000621152 TTBK1Q5TCY1 1321 aaPredicted RBP34.85■■■■□ 3.17
SMC6-210ENST00000621152 PTPRGP23470 1445 aa34.8■■■■□ 3.16
SMC6-210ENST00000621152 CARMIL2Q6F5E8 1435 aa34.79■■■■□ 3.16
SMC6-210ENST00000621152 IQGAP2Q13576 1575 aa34.75■■■■□ 3.15
SMC6-210ENST00000621152 TNIKQ9UKE5 1360 aa34.73■■■■□ 3.15
SMC6-210ENST00000621152 ADCY10Q96PN6 1610 aa34.67■■■■□ 3.14
SMC6-210ENST00000621152 FAM69CQ0P6D2 419 aa34.67■■■■□ 3.14
SMC6-210ENST00000621152 DISP1Q96F81 1524 aa34.6■■■■□ 3.13
SMC6-210ENST00000621152 UGGT2Q9NYU1 1516 aa34.57■■■■□ 3.12
SMC6-210ENST00000621152 PRXQ9BXM0 1461 aa34.57■■■■□ 3.12
SMC6-210ENST00000621152 MAPKBP1O60336 1514 aa34.56■■■■□ 3.12
SMC6-210ENST00000621152 CSRNP3Q8WYN3 585 aa34.56■■■■□ 3.12
SMC6-210ENST00000621152 ABCC10Q5T3U5 1492 aa34.56■■■■□ 3.12
SMC6-210ENST00000621152 KIF13AQ9H1H9 1805 aa34.53■■■■□ 3.12
SMC6-210ENST00000621152 UACAQ9BZF9 1416 aa34.49■■■■□ 3.11
SMC6-210ENST00000621152 ABCC2Q92887 1545 aa34.45■■■■□ 3.11
SMC6-210ENST00000621152 UHRF1BP1LA0JNW5 1464 aa34.43■■■■□ 3.1
SMC6-210ENST00000621152 KIAA0556O60303 1618 aa34.41■■■■□ 3.1
SMC6-210ENST00000621152 DIP2BQ9P265 1576 aa34.4■■■■□ 3.1
SMC6-210ENST00000621152 CTTNBP2Q8WZ74 1663 aa34.39■■■■□ 3.1
SMC6-210ENST00000621152 FAM9AQ8IZU1 332 aaPredicted RBP34.39■■■■□ 3.1
SMC6-210ENST00000621152 GOLGA3Q08378 1498 aa34.36■■■■□ 3.09
SMC6-210ENST00000621152 ASXL2Q76L83 1435 aa34.35■■■■□ 3.09
SMC6-210ENST00000621152 EEA1Q15075 1411 aa34.32■■■■□ 3.08
SMC6-210ENST00000621152 PLB1Q6P1J6 1458 aa34.32■■■■□ 3.08
SMC6-210ENST00000621152 P3H3Q8IVL6 736 aa34.29■■■■□ 3.08
SMC6-210ENST00000621152 KDM5BQ9UGL1 1544 aa34.28■■■■□ 3.08
SMC6-210ENST00000621152 CHIC1Q5VXU3 224 aa34.25■■■■□ 3.07
SMC6-210ENST00000621152 TSPOAP1O95153 1857 aa34.18■■■■□ 3.06
SMC6-210ENST00000621152 RANGAP1P46060 587 aaPredicted RBP34.17■■■■□ 3.06
SMC6-210ENST00000621152 AEBP2Q6ZN18 517 aaPredicted RBP34.17■■■■□ 3.06
SMC6-210ENST00000621152 ZCCHC11Q5TAX3 1644 aaKnown RBP34.15■■■■□ 3.06
SMC6-210ENST00000621152 GLI2P10070 1586 aa34.13■■■■□ 3.05
SMC6-210ENST00000621152 ABCA8O94911 1581 aa34.11■■■■□ 3.05
SMC6-210ENST00000621152 EPRSP07814 1512 aaKnown RBP34.11■■■■□ 3.05
SMC6-210ENST00000621152 KCNH8Q96L42 1107 aa34.08■■■■□ 3.05
SMC6-210ENST00000621152 ARID3CA6NKF2 412 aa34.06■■■■□ 3.04
SMC6-210ENST00000621152 KDM6BO15054 1643 aa34.04■■■■□ 3.04
SMC6-210ENST00000621152 EHMT2Q96KQ7 1210 aa34.03■■■■□ 3.04
SMC6-210ENST00000621152 WDR7Q9Y4E6 1490 aa34.02■■■■□ 3.04
SMC6-210ENST00000621152 SAMD9Q5K651 1589 aa33.97■■■■□ 3.03
SMC6-210ENST00000621152 UBTFP17480 764 aaKnown RBP33.95■■■■□ 3.03
SMC6-210ENST00000621152 KIF21BO75037 1637 aa33.93■■■■□ 3.02
SMC6-210ENST00000621152 PPRC1Q5VV67 1664 aaKnown RBP33.93■■■■□ 3.02
SMC6-210ENST00000621152 ATP10BO94823 1461 aa33.93■■■■□ 3.02
SMC6-210ENST00000621152 MAP3K4Q9Y6R4 1608 aa33.91■■■■□ 3.02
SMC6-210ENST00000621152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.9■■■■□ 3.02
SMC6-210ENST00000621152 HNRNPUL2Q1KMD3 747 aaKnown RBP33.9■■■■□ 3.02
SMC6-210ENST00000621152 TEX14Q8IWB6 1497 aa33.88■■■■□ 3.01
SMC6-210ENST00000621152 FHOD3Q2V2M9 1422 aa33.87■■■■□ 3.01
SMC6-210ENST00000621152 CD109Q6YHK3 1445 aa33.87■■■■□ 3.01
SMC6-210ENST00000621152 COL17A1Q9UMD9 1497 aaPredicted RBP33.83■■■■□ 3.01
SMC6-210ENST00000621152 RAPGEF6Q8TEU7 1601 aa33.8■■■■□ 3
SMC6-210ENST00000621152 MAGI3Q5TCQ9 1506 aa33.74■■■□□ 2.99
SMC6-210ENST00000621152 EFCAB5A4FU69 1503 aa33.73■■■□□ 2.99
SMC6-210ENST00000621152 NUP153P49790 1475 aaKnown RBP33.72■■■□□ 2.99
SMC6-210ENST00000621152 CFAP43Q8NDM7 1665 aa33.71■■■□□ 2.99
SMC6-210ENST00000621152 KDM4FA0A1W2PPD8 638 aa33.71■■■□□ 2.99
SMC6-210ENST00000621152 PLEKHD1A6NEE1 506 aa33.69■■■□□ 2.98
SMC6-210ENST00000621152 ATP1B4Q9UN42 357 aaPredicted RBP33.63■■■□□ 2.97
SMC6-210ENST00000621152 ARHGAP35Q9NRY4 1499 aa33.56■■■□□ 2.96
SMC6-210ENST00000621152 ABCA9Q8IUA7 1624 aa33.55■■■□□ 2.96
SMC6-210ENST00000621152 FMN1Q68DA7 1419 aa33.52■■■□□ 2.96
SMC6-210ENST00000621152 PHLDB1Q86UU1 1377 aa33.5■■■□□ 2.95
SMC6-210ENST00000621152 ARAP3Q8WWN8 1544 aa33.48■■■□□ 2.95
SMC6-210ENST00000621152 RAPGEF3O95398 923 aa33.44■■■□□ 2.94
SMC6-210ENST00000621152 CDK13Q14004 1512 aaKnown RBP33.43■■■□□ 2.94
SMC6-210ENST00000621152 ADGRL1O94910 1474 aa33.41■■■□□ 2.94
SMC6-210ENST00000621152 NEO1Q92859 1461 aa33.4■■■□□ 2.94
SMC6-210ENST00000621152 CDK11AQ9UQ88 783 aaPredicted RBP33.4■■■□□ 2.94
SMC6-210ENST00000621152 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.34■■■□□ 2.939e-7■■■□□ 17.5
SMC6-210ENST00000621152 HECW1Q76N89 1606 aa33.32■■■□□ 2.92
SMC6-210ENST00000621152 AKNAQ7Z591 1439 aa33.28■■■□□ 2.92
SMC6-210ENST00000621152 FANCAO15360 1455 aa33.26■■■□□ 2.92
SMC6-210ENST00000621152 TTC37Q6PGP7 1564 aa33.23■■■□□ 2.91
SMC6-210ENST00000621152 DENND4BO75064 1496 aaPredicted RBP33.22■■■□□ 2.91
SMC6-210ENST00000621152 PLCH2O75038 1416 aa33.21■■■□□ 2.91
SMC6-210ENST00000621152 CLIP1P30622 1438 aa33.19■■■□□ 2.9
SMC6-210ENST00000621152 CASKIN1Q8WXD9 1431 aa33.19■■■□□ 2.9
SMC6-210ENST00000621152 EFCAB2Q5VUJ9 269 aa33.18■■■□□ 2.9
SMC6-210ENST00000621152 TROQ12816 1431 aaPredicted RBP33.18■■■□□ 2.9
SMC6-210ENST00000621152 FRMPD1Q5SYB0 1578 aa33.13■■■□□ 2.89
SMC6-210ENST00000621152 CFAP74Q9C0B2 1584 aa33.13■■■□□ 2.89
SMC6-210ENST00000621152 ARID4BQ4LE39 1312 aaPredicted RBP33.12■■■□□ 2.89
SMC6-210ENST00000621152 SCAPERQ9BY12 1400 aa33.1■■■□□ 2.89
SMC6-210ENST00000621152 LRRIQ1Q96JM4 1722 aa33.08■■■□□ 2.89
SMC6-210ENST00000621152 PCF11O94913 1555 aaKnown RBP33.08■■■□□ 2.89
SMC6-210ENST00000621152 CCDC18Q5T9S5 1454 aa33.07■■■□□ 2.88
SMC6-210ENST00000621152 KIF14Q15058 1648 aa33.07■■■□□ 2.88
SMC6-210ENST00000621152 RICTORQ6R327 1708 aa33.03■■■□□ 2.88
SMC6-210ENST00000621152 FYCO1Q9BQS8 1478 aa33.01■■■□□ 2.88
SMC6-210ENST00000621152 MYO5CQ9NQX4 1742 aa32.99■■■□□ 2.87
SMC6-210ENST00000621152 ARHGAP5Q13017 1502 aa32.97■■■□□ 2.87
SMC6-210ENST00000621152 POGZQ7Z3K3 1410 aa32.95■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms