RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 AMER1Q5JTC6 1135 aaPredicted RBP20.42■□□□□ 0.86
TNFAIP3-211ENST00000621150 PPP4R3CPQ6ZMV5 832 aa20.38■□□□□ 0.85
TNFAIP3-211ENST00000621150 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
TNFAIP3-211ENST00000621150 GRIN2AQ12879 1464 aa20.35■□□□□ 0.85
TNFAIP3-211ENST00000621150 ERICH3Q5RHP9 1530 aa20.33■□□□□ 0.84
TNFAIP3-211ENST00000621150 LOC105371045A0A1W2PR82 267 aa20.31■□□□□ 0.84
TNFAIP3-211ENST00000621150 FHAD1B1AJZ9 1412 aa20.3■□□□□ 0.84
TNFAIP3-211ENST00000621150 CEP170Q5SW79 1584 aa20.29■□□□□ 0.84
TNFAIP3-211ENST00000621150 EEA1Q15075 1411 aa20.27■□□□□ 0.84
TNFAIP3-211ENST00000621150 NUP160Q12769 1436 aa20.26■□□□□ 0.83
TNFAIP3-211ENST00000621150 FOXD1Q16676 465 aa20.24■□□□□ 0.83
TNFAIP3-211ENST00000621150 FAM9AQ8IZU1 332 aaPredicted RBP20.24■□□□□ 0.83
TNFAIP3-211ENST00000621150 NCBP3Q53F19 620 aaKnown RBP20.22■□□□□ 0.83
TNFAIP3-211ENST00000621150 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
TNFAIP3-211ENST00000621150 ZBTB22O15209 634 aa20.21■□□□□ 0.83
TNFAIP3-211ENST00000621150 ERCC6L2Q5T890 1561 aa20.2■□□□□ 0.82
TNFAIP3-211ENST00000621150 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
TNFAIP3-211ENST00000621150 TRHP20396 242 aaPredicted RBP20.15■□□□□ 0.82
TNFAIP3-211ENST00000621150 KIF27Q86VH2 1401 aa20.12■□□□□ 0.81
TNFAIP3-211ENST00000621150 CUL7Q14999 1698 aa20.1■□□□□ 0.81
TNFAIP3-211ENST00000621150 IGF1RP08069 1367 aa20.1■□□□□ 0.81
TNFAIP3-211ENST00000621150 NPM3O75607 178 aaKnown RBP20.06■□□□□ 0.8
TNFAIP3-211ENST00000621150 PRG4Q92954 1404 aaPredicted RBP20.05■□□□□ 0.8
TNFAIP3-211ENST00000621150 JPH4Q96JJ6 628 aa20.05■□□□□ 0.8
TNFAIP3-211ENST00000621150 KIF21BO75037 1637 aa20.01■□□□□ 0.79
TNFAIP3-211ENST00000621150 KIAA0586Q9BVV6 1533 aa19.98■□□□□ 0.79
TNFAIP3-211ENST00000621150 GOLGA3Q08378 1498 aa19.96■□□□□ 0.79
TNFAIP3-211ENST00000621150 CARMIL1Q5VZK9 1371 aa19.96■□□□□ 0.79
TNFAIP3-211ENST00000621150 PRXQ9BXM0 1461 aa19.94■□□□□ 0.78
TNFAIP3-211ENST00000621150 TNIKQ9UKE5 1360 aa19.93■□□□□ 0.78
TNFAIP3-211ENST00000621150 RAPGEF2Q9Y4G8 1499 aa19.87■□□□□ 0.77
TNFAIP3-211ENST00000621150 KIF13AQ9H1H9 1805 aa19.84■□□□□ 0.77
TNFAIP3-211ENST00000621150 ADCY10Q96PN6 1610 aa19.84■□□□□ 0.77
TNFAIP3-211ENST00000621150 IQGAP2Q13576 1575 aa19.83■□□□□ 0.76
TNFAIP3-211ENST00000621150 CEP162Q5TB80 1403 aa19.8■□□□□ 0.76
TNFAIP3-211ENST00000621150 NPM1P06748 294 aaKnown RBP eCLIP19.76■□□□□ 0.75
TNFAIP3-211ENST00000621150 CARMIL2Q6F5E8 1435 aa19.76■□□□□ 0.75
TNFAIP3-211ENST00000621150 MAPKBP1O60336 1514 aa19.76■□□□□ 0.75
TNFAIP3-211ENST00000621150 UBTFP17480 764 aaKnown RBP19.75■□□□□ 0.75
TNFAIP3-211ENST00000621150 PTPRGP23470 1445 aa19.75■□□□□ 0.75
TNFAIP3-211ENST00000621150 DISP1Q96F81 1524 aa19.73■□□□□ 0.75
TNFAIP3-211ENST00000621150 CTTNBP2Q8WZ74 1663 aa19.72■□□□□ 0.75
TNFAIP3-211ENST00000621150 ABCC10Q5T3U5 1492 aa19.71■□□□□ 0.75
TNFAIP3-211ENST00000621150 TTBK1Q5TCY1 1321 aaPredicted RBP19.71■□□□□ 0.75
TNFAIP3-211ENST00000621150 UGGT2Q9NYU1 1516 aa19.7■□□□□ 0.74
TNFAIP3-211ENST00000621150 DIP2BQ9P265 1576 aa19.69■□□□□ 0.74
TNFAIP3-211ENST00000621150 FAM69CQ0P6D2 419 aa19.66■□□□□ 0.74
TNFAIP3-211ENST00000621150 KIAA0556O60303 1618 aa19.66■□□□□ 0.74
TNFAIP3-211ENST00000621150 ABCC2Q92887 1545 aa19.64■□□□□ 0.73
TNFAIP3-211ENST00000621150 CLIP1P30622 1438 aa19.63■□□□□ 0.73
TNFAIP3-211ENST00000621150 UHRF1BP1LA0JNW5 1464 aa19.62■□□□□ 0.73
TNFAIP3-211ENST00000621150 UACAQ9BZF9 1416 aa19.61■□□□□ 0.73
TNFAIP3-211ENST00000621150 TSPOAP1O95153 1857 aa19.59■□□□□ 0.73
TNFAIP3-211ENST00000621150 FOXD4L1Q9NU39 408 aa19.57■□□□□ 0.72
TNFAIP3-211ENST00000621150 ASXL2Q76L83 1435 aa19.55■□□□□ 0.72
TNFAIP3-211ENST00000621150 KDM5BQ9UGL1 1544 aa19.54■□□□□ 0.72
TNFAIP3-211ENST00000621150 ZCCHC11Q5TAX3 1644 aaKnown RBP19.53■□□□□ 0.72
TNFAIP3-211ENST00000621150 PLB1Q6P1J6 1458 aa19.53■□□□□ 0.72
TNFAIP3-211ENST00000621150 VPS8Q8N3P4 1428 aa19.5■□□□□ 0.71
TNFAIP3-211ENST00000621150 GLI2P10070 1586 aa19.49■□□□□ 0.71
TNFAIP3-211ENST00000621150 KDM6BO15054 1643 aa19.48■□□□□ 0.71
TNFAIP3-211ENST00000621150 ARHGAP35Q9NRY4 1499 aa19.47■□□□□ 0.71
TNFAIP3-211ENST00000621150 PPRC1Q5VV67 1664 aaKnown RBP19.46■□□□□ 0.71
TNFAIP3-211ENST00000621150 ABCA8O94911 1581 aa19.46■□□□□ 0.71
TNFAIP3-211ENST00000621150 PIAS4Q8N2W9 510 aaPredicted RBP19.46■□□□□ 0.71
TNFAIP3-211ENST00000621150 EPRSP07814 1512 aaKnown RBP19.44■□□□□ 0.7
TNFAIP3-211ENST00000621150 MAP3K4Q9Y6R4 1608 aa19.42■□□□□ 0.7
TNFAIP3-211ENST00000621150 SAMD9Q5K651 1589 aa19.41■□□□□ 0.7
TNFAIP3-211ENST00000621150 TRIM26Q12899 539 aaPredicted RBP19.4■□□□□ 0.7
TNFAIP3-211ENST00000621150 CNKSR2Q8WXI2 1034 aa19.39■□□□□ 0.69
TNFAIP3-211ENST00000621150 WDR7Q9Y4E6 1490 aa19.38■□□□□ 0.69
TNFAIP3-211ENST00000621150 P3H3Q8IVL6 736 aa19.38■□□□□ 0.69
TNFAIP3-211ENST00000621150 PCGF6Q9BYE7 350 aa19.36■□□□□ 0.69
TNFAIP3-211ENST00000621150 RANGAP1P46060 587 aaPredicted RBP19.35■□□□□ 0.69
TNFAIP3-211ENST00000621150 EFCAB5A4FU69 1503 aa19.35■□□□□ 0.69
TNFAIP3-211ENST00000621150 CFAP43Q8NDM7 1665 aa19.31■□□□□ 0.68
TNFAIP3-211ENST00000621150 TEX14Q8IWB6 1497 aa19.3■□□□□ 0.68
TNFAIP3-211ENST00000621150 RAPGEF6Q8TEU7 1601 aa19.29■□□□□ 0.68
TNFAIP3-211ENST00000621150 ATP10BO94823 1461 aa19.29■□□□□ 0.68
TNFAIP3-211ENST00000621150 COL17A1Q9UMD9 1497 aaPredicted RBP19.28■□□□□ 0.68
TNFAIP3-211ENST00000621150 KCNH8Q96L42 1107 aa19.28■□□□□ 0.68
TNFAIP3-211ENST00000621150 ARID3CA6NKF2 412 aa19.27■□□□□ 0.68
TNFAIP3-211ENST00000621150 PPARGC1BQ86YN6 1023 aaKnown RBP19.26■□□□□ 0.67
TNFAIP3-211ENST00000621150 FHOD3Q2V2M9 1422 aa19.24■□□□□ 0.67
TNFAIP3-211ENST00000621150 CD109Q6YHK3 1445 aa19.24■□□□□ 0.67
TNFAIP3-211ENST00000621150 MAGI3Q5TCQ9 1506 aa19.23■□□□□ 0.67
TNFAIP3-211ENST00000621150 FKBP8Q14318 412 aa19.22■□□□□ 0.67
TNFAIP3-211ENST00000621150 NUP153P49790 1475 aaKnown RBP19.21■□□□□ 0.67
TNFAIP3-211ENST00000621150 MAP3K1Q13233 1512 aa19.19■□□□□ 0.66
TNFAIP3-211ENST00000621150 KDM4FA0A1W2PPD8 638 aa19.18■□□□□ 0.66
TNFAIP3-211ENST00000621150 ABCA9Q8IUA7 1624 aa19.18■□□□□ 0.66
TNFAIP3-211ENST00000621150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.15■□□□□ 0.66
TNFAIP3-211ENST00000621150 HNRNPUL2Q1KMD3 747 aaKnown RBP19.15■□□□□ 0.66
TNFAIP3-211ENST00000621150 PCF11O94913 1555 aaKnown RBP19.15■□□□□ 0.66
TNFAIP3-211ENST00000621150 FMN1Q68DA7 1419 aa19.14■□□□□ 0.65
TNFAIP3-211ENST00000621150 CASKIN1Q8WXD9 1431 aa19.14■□□□□ 0.65
TNFAIP3-211ENST00000621150 FYCO1Q9BQS8 1478 aa19.13■□□□□ 0.65
TNFAIP3-211ENST00000621150 APLP2Q06481 763 aa19.11■□□□□ 0.65
TNFAIP3-211ENST00000621150 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
TNFAIP3-211ENST00000621150 KANK4Q5T7N3 995 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms