RNA–Protein interactions for RNA: ENST00000621036.4

CYFIP1-212, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 3

Gene CYFIP1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-212ENST00000621036 SHROOM2Q13796 1616 aa17.29■□□□□ 0.36
CYFIP1-212ENST00000621036 FHAD1B1AJZ9 1412 aa17.29■□□□□ 0.36
CYFIP1-212ENST00000621036 PRG4Q92954 1404 aaPredicted RBP17.26■□□□□ 0.35
CYFIP1-212ENST00000621036 KIF13AQ9H1H9 1805 aa17.24■□□□□ 0.35
CYFIP1-212ENST00000621036 FAM69CQ0P6D2 419 aa17.23■□□□□ 0.35
CYFIP1-212ENST00000621036 JPH4Q96JJ6 628 aa17.23■□□□□ 0.35
CYFIP1-212ENST00000621036 ABCC10Q5T3U5 1492 aa17.19■□□□□ 0.34
CYFIP1-212ENST00000621036 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
CYFIP1-212ENST00000621036 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
CYFIP1-212ENST00000621036 NPM1P06748 294 aaKnown RBP eCLIP17.17■□□□□ 0.34
CYFIP1-212ENST00000621036 BIVM-ERCC5R4GMW8 1640 aa17.15■□□□□ 0.34
CYFIP1-212ENST00000621036 KDM4FA0A1W2PPD8 638 aa17.15■□□□□ 0.34
CYFIP1-212ENST00000621036 SUPT5HO00267 1087 aaKnown RBP17.15■□□□□ 0.34
CYFIP1-212ENST00000621036 MAPKBP1O60336 1514 aa17.11■□□□□ 0.33
CYFIP1-212ENST00000621036 DIP2BQ9P265 1576 aa17.11■□□□□ 0.33
CYFIP1-212ENST00000621036 RUSC2Q8N2Y8 1516 aa17.08■□□□□ 0.32
CYFIP1-212ENST00000621036 ADCY10Q96PN6 1610 aa17.07■□□□□ 0.32
CYFIP1-212ENST00000621036 KDM6BO15054 1643 aa17.05■□□□□ 0.32
CYFIP1-212ENST00000621036 PPP4R3CPQ6ZMV5 832 aa17.04■□□□□ 0.32
CYFIP1-212ENST00000621036 ILDR1Q86SU0 546 aaPredicted RBP17.04■□□□□ 0.32
CYFIP1-212ENST00000621036 KIAA0586Q9BVV6 1533 aa16.99■□□□□ 0.31
CYFIP1-212ENST00000621036 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
CYFIP1-212ENST00000621036 TSPOAP1O95153 1857 aa16.96■□□□□ 0.31
CYFIP1-212ENST00000621036 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
CYFIP1-212ENST00000621036 TTBK1Q5TCY1 1321 aaPredicted RBP16.95■□□□□ 0.3
CYFIP1-212ENST00000621036 IGF1RP08069 1367 aa16.94■□□□□ 0.3
CYFIP1-212ENST00000621036 PTPRGP23470 1445 aa16.94■□□□□ 0.3
CYFIP1-212ENST00000621036 ASXL2Q76L83 1435 aa16.87■□□□□ 0.29
CYFIP1-212ENST00000621036 ADGRL1O94910 1474 aa16.87■□□□□ 0.29
CYFIP1-212ENST00000621036 ABCC2Q92887 1545 aa16.87■□□□□ 0.29
CYFIP1-212ENST00000621036 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
CYFIP1-212ENST00000621036 TNIKQ9UKE5 1360 aa16.86■□□□□ 0.29
CYFIP1-212ENST00000621036 PLB1Q6P1J6 1458 aa16.85■□□□□ 0.29
CYFIP1-212ENST00000621036 GLI2P10070 1586 aa16.83■□□□□ 0.28
CYFIP1-212ENST00000621036 CUL7Q14999 1698 aa16.83■□□□□ 0.28
CYFIP1-212ENST00000621036 CARMIL2Q6F5E8 1435 aa16.83■□□□□ 0.28
CYFIP1-212ENST00000621036 COL17A1Q9UMD9 1497 aaPredicted RBP16.83■□□□□ 0.28
CYFIP1-212ENST00000621036 PPRC1Q5VV67 1664 aaKnown RBP16.82■□□□□ 0.28
CYFIP1-212ENST00000621036 CARMIL1Q5VZK9 1371 aa16.81■□□□□ 0.28
CYFIP1-212ENST00000621036 UHRF1BP1LA0JNW5 1464 aa16.79■□□□□ 0.28
CYFIP1-212ENST00000621036 UACAQ9BZF9 1416 aa16.79■□□□□ 0.28
CYFIP1-212ENST00000621036 EPRSP07814 1512 aaKnown RBP16.76■□□□□ 0.27
CYFIP1-212ENST00000621036 HECW2Q9P2P5 1572 aa16.75■□□□□ 0.27
CYFIP1-212ENST00000621036 IQGAP2Q13576 1575 aa16.74■□□□□ 0.27
CYFIP1-212ENST00000621036 DISP1Q96F81 1524 aa16.73■□□□□ 0.27
CYFIP1-212ENST00000621036 KDM5BQ9UGL1 1544 aa16.72■□□□□ 0.27
CYFIP1-212ENST00000621036 TEX14Q8IWB6 1497 aa16.72■□□□□ 0.27
CYFIP1-212ENST00000621036 MAP3K4Q9Y6R4 1608 aa16.7■□□□□ 0.26
CYFIP1-212ENST00000621036 POTEDQ86YR6 584 aa16.7■□□□□ 0.26
CYFIP1-212ENST00000621036 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
CYFIP1-212ENST00000621036 ZCCHC11Q5TAX3 1644 aaKnown RBP16.65■□□□□ 0.26
CYFIP1-212ENST00000621036 UGGT2Q9NYU1 1516 aa16.64■□□□□ 0.25
CYFIP1-212ENST00000621036 WDR7Q9Y4E6 1490 aa16.63■□□□□ 0.25
CYFIP1-212ENST00000621036 KIAA0556O60303 1618 aa16.6■□□□□ 0.25
CYFIP1-212ENST00000621036 KCNH8Q96L42 1107 aa16.59■□□□□ 0.25
CYFIP1-212ENST00000621036 CD109Q6YHK3 1445 aa16.59■□□□□ 0.25
CYFIP1-212ENST00000621036 RAPGEF2Q9Y4G8 1499 aa16.59■□□□□ 0.25
CYFIP1-212ENST00000621036 MAGI3Q5TCQ9 1506 aa16.57■□□□□ 0.24
CYFIP1-212ENST00000621036 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
CYFIP1-212ENST00000621036 FBXO41Q8TF61 875 aa16.54■□□□□ 0.24
CYFIP1-212ENST00000621036 NCBP3Q53F19 620 aaKnown RBP16.51■□□□□ 0.23
CYFIP1-212ENST00000621036 CFAP43Q8NDM7 1665 aa16.5■□□□□ 0.23
CYFIP1-212ENST00000621036 KIF21BO75037 1637 aa16.49■□□□□ 0.23
CYFIP1-212ENST00000621036 KCNA4P22459 653 aa16.49■□□□□ 0.23
CYFIP1-212ENST00000621036 ABCA8O94911 1581 aa16.48■□□□□ 0.23
CYFIP1-212ENST00000621036 GOLGA3Q08378 1498 aa16.46■□□□□ 0.23
CYFIP1-212ENST00000621036 ARAP3Q8WWN8 1544 aa16.45■□□□□ 0.22
CYFIP1-212ENST00000621036 PTPRMP28827 1452 aa16.44■□□□□ 0.22
CYFIP1-212ENST00000621036 ARID3CA6NKF2 412 aa16.44■□□□□ 0.22
CYFIP1-212ENST00000621036 RAPGEF3O95398 923 aa16.4■□□□□ 0.22
CYFIP1-212ENST00000621036 CTTNBP2Q8WZ74 1663 aa16.39■□□□□ 0.21
CYFIP1-212ENST00000621036 ADAMTSL3P82987 1691 aa16.38■□□□□ 0.21
CYFIP1-212ENST00000621036 ATP10BO94823 1461 aa16.38■□□□□ 0.21
CYFIP1-212ENST00000621036 P3H3Q8IVL6 736 aa16.37■□□□□ 0.21
CYFIP1-212ENST00000621036 PHLDB1Q86UU1 1377 aa16.37■□□□□ 0.21
CYFIP1-212ENST00000621036 ARID4BQ4LE39 1312 aaPredicted RBP16.35■□□□□ 0.21
CYFIP1-212ENST00000621036 FAM9AQ8IZU1 332 aaPredicted RBP16.33■□□□□ 0.2
CYFIP1-212ENST00000621036 PRXQ9BXM0 1461 aa16.33■□□□□ 0.2
CYFIP1-212ENST00000621036 PCF11O94913 1555 aaKnown RBP16.33■□□□□ 0.2
CYFIP1-212ENST00000621036 ABCA9Q8IUA7 1624 aa16.32■□□□□ 0.2
CYFIP1-212ENST00000621036 LMTK3Q96Q04 1460 aa16.32■□□□□ 0.2
CYFIP1-212ENST00000621036 NEO1Q92859 1461 aa16.31■□□□□ 0.2
CYFIP1-212ENST00000621036 NPM3O75607 178 aaKnown RBP16.31■□□□□ 0.2
CYFIP1-212ENST00000621036 MADDQ8WXG6 1647 aa16.3■□□□□ 0.2
CYFIP1-212ENST00000621036 BCORL1Q5H9F3 1711 aa16.29■□□□□ 0.2
CYFIP1-212ENST00000621036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.29■□□□□ 0.2
CYFIP1-212ENST00000621036 HNRNPUL2Q1KMD3 747 aaKnown RBP16.29■□□□□ 0.2
CYFIP1-212ENST00000621036 RNF216Q9NWF9 866 aaPredicted RBP16.29■□□□□ 0.2
CYFIP1-212ENST00000621036 HSPA2P54652 639 aa16.28■□□□□ 0.2
CYFIP1-212ENST00000621036 FRMPD1Q5SYB0 1578 aa16.28■□□□□ 0.2
CYFIP1-212ENST00000621036 HOXD11P31277 338 aaPredicted RBP16.27■□□□□ 0.2
CYFIP1-212ENST00000621036 RIMS1Q86UR5 1692 aaKnown RBP16.21■□□□□ 0.19
CYFIP1-212ENST00000621036 CERKQ8TCT0 537 aa16.21■□□□□ 0.19
CYFIP1-212ENST00000621036 DENND4BO75064 1496 aaPredicted RBP16.21■□□□□ 0.19
CYFIP1-212ENST00000621036 ARHGEF40Q8TER5 1519 aa16.2■□□□□ 0.18
CYFIP1-212ENST00000621036 RAPGEF6Q8TEU7 1601 aa16.2■□□□□ 0.18
CYFIP1-212ENST00000621036 NUP153P49790 1475 aaKnown RBP16.19■□□□□ 0.18
CYFIP1-212ENST00000621036 FHOD3Q2V2M9 1422 aa16.19■□□□□ 0.18
CYFIP1-212ENST00000621036 AKNAQ7Z591 1439 aa16.19■□□□□ 0.18
CYFIP1-212ENST00000621036 SAMD9Q5K651 1589 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms