RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 CADPSQ9ULU8 1353 aa16.97■□□□□ 0.31
GTF2I-218ENST00000620879 TOP2AP11388 1531 aaKnown RBP16.97■□□□□ 0.31
GTF2I-218ENST00000620879 PDS5BQ9NTI5 1447 aa16.94■□□□□ 0.3
GTF2I-218ENST00000620879 RGL3Q3MIN7 710 aa16.94■□□□□ 0.3
GTF2I-218ENST00000620879 KANK4Q5T7N3 995 aaPredicted RBP16.94■□□□□ 0.3
GTF2I-218ENST00000620879 CLSPNQ9HAW4 1339 aa16.92■□□□□ 0.3
GTF2I-218ENST00000620879 EIF4G1Q04637 1599 aaKnown RBP16.92■□□□□ 0.3
GTF2I-218ENST00000620879 SMARCA4P51532 1647 aa16.9■□□□□ 0.3
GTF2I-218ENST00000620879 SIN3AQ96ST3 1273 aa16.9■□□□□ 0.3
GTF2I-218ENST00000620879 DAXXQ9UER7 740 aaPredicted RBP16.89■□□□□ 0.3
GTF2I-218ENST00000620879 SALL2Q9Y467 1007 aaPredicted RBP16.89■□□□□ 0.29
GTF2I-218ENST00000620879 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.29
GTF2I-218ENST00000620879 SCAF1Q9H7N4 1312 aaKnown RBP16.88■□□□□ 0.29
GTF2I-218ENST00000620879 SLC24A1O60721 1099 aa16.87■□□□□ 0.29
GTF2I-218ENST00000620879 ACIN1Q9UKV3 1341 aaKnown RBP16.86■□□□□ 0.29
GTF2I-218ENST00000620879 RUSC2Q8N2Y8 1516 aa16.86■□□□□ 0.29
GTF2I-218ENST00000620879 BCL11AQ9H165 835 aa16.85■□□□□ 0.29
GTF2I-218ENST00000620879 MIER1Q8N108 512 aa16.85■□□□□ 0.29
GTF2I-218ENST00000620879 HNRNPUQ00839 825 aaKnown RBP eCLIP16.84■□□□□ 0.29
GTF2I-218ENST00000620879 FHAD1B1AJZ9 1412 aa16.82■□□□□ 0.28
GTF2I-218ENST00000620879 CCNB3Q8WWL7 1395 aa16.82■□□□□ 0.28
GTF2I-218ENST00000620879 VPS8Q8N3P4 1428 aa16.81■□□□□ 0.28
GTF2I-218ENST00000620879 EIF4G2P78344 907 aaKnown RBP eCLIP16.79■□□□□ 0.285e-6■■□□□ 14.3
GTF2I-218ENST00000620879 RAPGEF2Q9Y4G8 1499 aa16.77■□□□□ 0.27
GTF2I-218ENST00000620879 NEFMP07197 916 aa16.76■□□□□ 0.27
GTF2I-218ENST00000620879 TMC1Q8TDI8 760 aa16.75■□□□□ 0.27
GTF2I-218ENST00000620879 SENP3-EIF4A1A0A087X0R7 540 aa16.75■□□□□ 0.27
GTF2I-218ENST00000620879 CANXP27824 592 aaKnown RBP16.74■□□□□ 0.27
GTF2I-218ENST00000620879 MRS2Q9HD23 443 aa16.74■□□□□ 0.27
GTF2I-218ENST00000620879 FANCD2Q9BXW9 1451 aa16.72■□□□□ 0.27
GTF2I-218ENST00000620879 ARID4BQ4LE39 1312 aaPredicted RBP16.71■□□□□ 0.27
GTF2I-218ENST00000620879 FHOD3Q2V2M9 1422 aa16.7■□□□□ 0.26
GTF2I-218ENST00000620879 FKBP8Q14318 412 aa16.69■□□□□ 0.26
GTF2I-218ENST00000620879 FOXD1Q16676 465 aa16.68■□□□□ 0.26
GTF2I-218ENST00000620879 JPH4Q96JJ6 628 aa16.67■□□□□ 0.26
GTF2I-218ENST00000620879 PLEKHG5O94827 1062 aa16.66■□□□□ 0.26
GTF2I-218ENST00000620879 PPP1R15AO75807 674 aaPredicted RBP16.66■□□□□ 0.26
GTF2I-218ENST00000620879 CARD11Q9BXL7 1154 aa16.64■□□□□ 0.25
GTF2I-218ENST00000620879 CARMIL2Q6F5E8 1435 aa16.63■□□□□ 0.25
GTF2I-218ENST00000620879 MLECQ14165 292 aa16.62■□□□□ 0.25
GTF2I-218ENST00000620879 FMN1Q68DA7 1419 aa16.6■□□□□ 0.25
GTF2I-218ENST00000620879 NCAPD3P42695 1498 aa16.6■□□□□ 0.25
GTF2I-218ENST00000620879 RAD54L2Q9Y4B4 1467 aa16.59■□□□□ 0.25
GTF2I-218ENST00000620879 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
GTF2I-218ENST00000620879 ARHGAP35Q9NRY4 1499 aa16.58■□□□□ 0.25
GTF2I-218ENST00000620879 GGT6Q6P531 493 aa16.58■□□□□ 0.24
GTF2I-218ENST00000620879 DCAF11Q8TEB1 546 aa16.58■□□□□ 0.24
GTF2I-218ENST00000620879 ZBTB47Q9UFB7 747 aaPredicted RBP16.58■□□□□ 0.24
GTF2I-218ENST00000620879 IGF1RP08069 1367 aa16.57■□□□□ 0.24
GTF2I-218ENST00000620879 IRX6P78412 446 aaPredicted RBP16.57■□□□□ 0.24
GTF2I-218ENST00000620879 WDR43Q15061 677 aaKnown RBP eCLIP16.56■□□□□ 0.24
GTF2I-218ENST00000620879 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
GTF2I-218ENST00000620879 PKD2Q13563 968 aa16.55■□□□□ 0.24
GTF2I-218ENST00000620879 SETD5Q9C0A6 1442 aa16.55■□□□□ 0.24
GTF2I-218ENST00000620879 DNAJC5BQ9UF47 199 aa16.54■□□□□ 0.24
GTF2I-218ENST00000620879 RAB3GAP2Q9H2M9 1393 aa16.54■□□□□ 0.24
GTF2I-218ENST00000620879 HNRNPMP52272 730 aaKnown RBP eCLIP16.53■□□□□ 0.242e-6■■■■□ 22.5
GTF2I-218ENST00000620879 EFCAB2Q5VUJ9 269 aa16.5■□□□□ 0.23
GTF2I-218ENST00000620879 NESP48681 1621 aa16.49■□□□□ 0.23
GTF2I-218ENST00000620879 C14orf37Q86TY3 774 aa16.49■□□□□ 0.23
GTF2I-218ENST00000620879 MPHOSPH9Q99550 1183 aa16.47■□□□□ 0.23
GTF2I-218ENST00000620879 AQRO60306 1485 aaKnown RBP eCLIP16.47■□□□□ 0.239e-7■■■□□ 15.4
GTF2I-218ENST00000620879 ZBTB7CA1YPR0 619 aa16.46■□□□□ 0.23
GTF2I-218ENST00000620879 GAPVD1Q14C86 1478 aa16.45■□□□□ 0.22
GTF2I-218ENST00000620879 PPM1GO15355 546 aaPredicted RBP16.45■□□□□ 0.22
GTF2I-218ENST00000620879 NUP155O75694 1391 aa16.45■□□□□ 0.22
GTF2I-218ENST00000620879 KNSTRNQ9Y448 316 aa16.45■□□□□ 0.22
GTF2I-218ENST00000620879 NPM2Q86SE8 214 aaKnown RBP16.44■□□□□ 0.22
GTF2I-218ENST00000620879 TNNT2P45379 298 aaPredicted RBP16.44■□□□□ 0.22
GTF2I-218ENST00000620879 SAFB2Q14151 953 aaKnown RBP eCLIP16.44■□□□□ 0.22
GTF2I-218ENST00000620879 RTL5Q5HYW3 569 aaPredicted RBP16.44■□□□□ 0.22
GTF2I-218ENST00000620879 KIF3BO15066 747 aa16.42■□□□□ 0.22
GTF2I-218ENST00000620879 POGKQ9P215 609 aa16.42■□□□□ 0.22
GTF2I-218ENST00000620879 CYB5RLQ6IPT4 315 aa16.42■□□□□ 0.22
GTF2I-218ENST00000620879 CCDC136Q96JN2 1154 aa16.4■□□□□ 0.22
GTF2I-218ENST00000620879 CC2D1BQ5T0F9 858 aaKnown RBP16.4■□□□□ 0.22
GTF2I-218ENST00000620879 NEUROD2Q15784 382 aa16.39■□□□□ 0.21
GTF2I-218ENST00000620879 PTPRGP23470 1445 aa16.39■□□□□ 0.21
GTF2I-218ENST00000620879 HSPA5P11021 654 aaKnown RBP16.39■□□□□ 0.21
GTF2I-218ENST00000620879 CDCA8Q53HL2 280 aa16.38■□□□□ 0.21
GTF2I-218ENST00000620879 CFTRP13569 1480 aa16.38■□□□□ 0.21
GTF2I-218ENST00000620879 TIMELESSQ9UNS1 1208 aa16.37■□□□□ 0.21
GTF2I-218ENST00000620879 KANK1Q14678 1352 aa16.37■□□□□ 0.21
GTF2I-218ENST00000620879 ANKRD30AQ9BXX3 1397 aa16.37■□□□□ 0.21
GTF2I-218ENST00000620879 L3MBTL2Q969R5 705 aa16.36■□□□□ 0.21
GTF2I-218ENST00000620879 STK26Q9P289 416 aa16.35■□□□□ 0.21
GTF2I-218ENST00000620879 SPAG9O60271 1321 aaKnown RBP16.34■□□□□ 0.21
GTF2I-218ENST00000620879 A0A0G2JS52 829 aa16.33■□□□□ 0.2
GTF2I-218ENST00000620879 LMOD2Q6P5Q4 547 aa16.33■□□□□ 0.2
GTF2I-218ENST00000620879 ZNF644Q9H582 1327 aaPredicted RBP16.33■□□□□ 0.2
GTF2I-218ENST00000620879 CCDC18Q5T9S5 1454 aa16.33■□□□□ 0.2
GTF2I-218ENST00000620879 CC2D2AQ9P2K1 1620 aa16.32■□□□□ 0.2
GTF2I-218ENST00000620879 OSCARQ8IYS5 282 aa16.32■□□□□ 0.2
GTF2I-218ENST00000620879 SYNJ1O43426 1573 aa16.32■□□□□ 0.2
GTF2I-218ENST00000620879 SUPT16HQ9Y5B9 1047 aaKnown RBP16.31■□□□□ 0.2
GTF2I-218ENST00000620879 TMF1P82094 1093 aa16.3■□□□□ 0.2
GTF2I-218ENST00000620879 NUTM2DQ5VT03 806 aaPredicted RBP16.3■□□□□ 0.2
GTF2I-218ENST00000620879 BICRAQ9NZM4 1560 aa16.29■□□□□ 0.2
GTF2I-218ENST00000620879 SOX12O15370 315 aa16.29■□□□□ 0.2
GTF2I-218ENST00000620879 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms