RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 EEA1Q15075 1411 aa22.44■■□□□ 1.18
MUC1-229ENST00000620770 CARMIL1Q5VZK9 1371 aa22.43■■□□□ 1.18
MUC1-229ENST00000620770 ERCC6L2Q5T890 1561 aa22.41■■□□□ 1.18
MUC1-229ENST00000620770 TRHP20396 242 aaPredicted RBP22.39■■□□□ 1.17
MUC1-229ENST00000620770 CSRNP3Q8WYN3 585 aa22.39■■□□□ 1.17
MUC1-229ENST00000620770 RAPGEF2Q9Y4G8 1499 aa22.33■■□□□ 1.16
MUC1-229ENST00000620770 PRXQ9BXM0 1461 aa22.31■■□□□ 1.16
MUC1-229ENST00000620770 PRG4Q92954 1404 aaPredicted RBP22.27■■□□□ 1.16
MUC1-229ENST00000620770 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
MUC1-229ENST00000620770 KIF21BO75037 1637 aa22.21■■□□□ 1.15
MUC1-229ENST00000620770 JPH4Q96JJ6 628 aa22.21■■□□□ 1.15
MUC1-229ENST00000620770 KIAA0586Q9BVV6 1533 aa22.2■■□□□ 1.14
MUC1-229ENST00000620770 GOLGA3Q08378 1498 aa22.14■■□□□ 1.13
MUC1-229ENST00000620770 CTTNBP2Q8WZ74 1663 aa22.11■■□□□ 1.13
MUC1-229ENST00000620770 IQGAP2Q13576 1575 aa22.1■■□□□ 1.13
MUC1-229ENST00000620770 UBTFP17480 764 aaKnown RBP22.08■■□□□ 1.13
MUC1-229ENST00000620770 KIF13AQ9H1H9 1805 aa22.08■■□□□ 1.12
MUC1-229ENST00000620770 ADCY10Q96PN6 1610 aa22.06■■□□□ 1.12
MUC1-229ENST00000620770 RANGAP1P46060 587 aaPredicted RBP22.01■■□□□ 1.11
MUC1-229ENST00000620770 MAPKBP1O60336 1514 aa22.01■■□□□ 1.11
MUC1-229ENST00000620770 CARMIL2Q6F5E8 1435 aa21.99■■□□□ 1.11
MUC1-229ENST00000620770 NPM1P06748 294 aaKnown RBP eCLIP21.97■■□□□ 1.11
MUC1-229ENST00000620770 UGGT2Q9NYU1 1516 aa21.96■■□□□ 1.11
MUC1-229ENST00000620770 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
MUC1-229ENST00000620770 PTPRGP23470 1445 aa21.93■■□□□ 1.1
MUC1-229ENST00000620770 DIP2BQ9P265 1576 aa21.93■■□□□ 1.1
MUC1-229ENST00000620770 ABCC10Q5T3U5 1492 aa21.92■■□□□ 1.1
MUC1-229ENST00000620770 TNIKQ9UKE5 1360 aa21.92■■□□□ 1.1
MUC1-229ENST00000620770 DISP1Q96F81 1524 aa21.9■■□□□ 1.1
MUC1-229ENST00000620770 TTBK1Q5TCY1 1321 aaPredicted RBP21.9■■□□□ 1.1
MUC1-229ENST00000620770 KIAA0556O60303 1618 aa21.89■■□□□ 1.09
MUC1-229ENST00000620770 P3H3Q8IVL6 736 aa21.86■■□□□ 1.09
MUC1-229ENST00000620770 ABCC2Q92887 1545 aa21.85■■□□□ 1.09
MUC1-229ENST00000620770 SAMD9Q5K651 1589 aa21.83■■□□□ 1.09
MUC1-229ENST00000620770 FAM69CQ0P6D2 419 aa21.82■■□□□ 1.08
MUC1-229ENST00000620770 UHRF1BP1LA0JNW5 1464 aa21.82■■□□□ 1.08
MUC1-229ENST00000620770 EFCAB5A4FU69 1503 aa21.8■■□□□ 1.08
MUC1-229ENST00000620770 TSPOAP1O95153 1857 aa21.79■■□□□ 1.08
MUC1-229ENST00000620770 UACAQ9BZF9 1416 aa21.79■■□□□ 1.08
MUC1-229ENST00000620770 FHOD3Q2V2M9 1422 aa21.78■■□□□ 1.08
MUC1-229ENST00000620770 ARHGAP35Q9NRY4 1499 aa21.76■■□□□ 1.07
MUC1-229ENST00000620770 CLIP1P30622 1438 aa21.75■■□□□ 1.07
MUC1-229ENST00000620770 CEP162Q5TB80 1403 aa21.74■■□□□ 1.07
MUC1-229ENST00000620770 PLB1Q6P1J6 1458 aa21.74■■□□□ 1.07
MUC1-229ENST00000620770 ZCCHC11Q5TAX3 1644 aaKnown RBP21.73■■□□□ 1.07
MUC1-229ENST00000620770 ASXL2Q76L83 1435 aa21.72■■□□□ 1.07
MUC1-229ENST00000620770 KDM6BO15054 1643 aa21.72■■□□□ 1.07
MUC1-229ENST00000620770 KDM5BQ9UGL1 1544 aa21.71■■□□□ 1.07
MUC1-229ENST00000620770 GLI2P10070 1586 aa21.7■■□□□ 1.06
MUC1-229ENST00000620770 PPRC1Q5VV67 1664 aaKnown RBP21.64■■□□□ 1.05
MUC1-229ENST00000620770 ABCA8O94911 1581 aa21.63■■□□□ 1.05
MUC1-229ENST00000620770 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
MUC1-229ENST00000620770 MAP3K4Q9Y6R4 1608 aa21.62■■□□□ 1.05
MUC1-229ENST00000620770 EPRSP07814 1512 aaKnown RBP21.6■■□□□ 1.05
MUC1-229ENST00000620770 FMN1Q68DA7 1419 aa21.59■■□□□ 1.05
MUC1-229ENST00000620770 ARID3CA6NKF2 412 aa21.58■■□□□ 1.05
MUC1-229ENST00000620770 RAPGEF6Q8TEU7 1601 aa21.58■■□□□ 1.04
MUC1-229ENST00000620770 WDR7Q9Y4E6 1490 aa21.58■■□□□ 1.04
MUC1-229ENST00000620770 ATP1B4Q9UN42 357 aaPredicted RBP21.55■■□□□ 1.04
MUC1-229ENST00000620770 TEX14Q8IWB6 1497 aa21.53■■□□□ 1.04
MUC1-229ENST00000620770 PCF11O94913 1555 aaKnown RBP21.53■■□□□ 1.04
MUC1-229ENST00000620770 CFAP43Q8NDM7 1665 aa21.51■■□□□ 1.03
MUC1-229ENST00000620770 NUP153P49790 1475 aaKnown RBP21.5■■□□□ 1.03
MUC1-229ENST00000620770 HECW1Q76N89 1606 aa21.48■■□□□ 1.03
MUC1-229ENST00000620770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.46■■□□□ 1.03
MUC1-229ENST00000620770 HNRNPUL2Q1KMD3 747 aaKnown RBP21.46■■□□□ 1.03
MUC1-229ENST00000620770 CASKIN1Q8WXD9 1431 aa21.46■■□□□ 1.03
MUC1-229ENST00000620770 ATP10BO94823 1461 aa21.44■■□□□ 1.02
MUC1-229ENST00000620770 FYCO1Q9BQS8 1478 aa21.44■■□□□ 1.02
MUC1-229ENST00000620770 VPS8Q8N3P4 1428 aa21.43■■□□□ 1.02
MUC1-229ENST00000620770 CDK13Q14004 1512 aaKnown RBP21.43■■□□□ 1.02
MUC1-229ENST00000620770 MAGI3Q5TCQ9 1506 aa21.39■■□□□ 1.02
MUC1-229ENST00000620770 CD109Q6YHK3 1445 aa21.38■■□□□ 1.01
MUC1-229ENST00000620770 LRRIQ1Q96JM4 1722 aa21.37■■□□□ 1.01
MUC1-229ENST00000620770 KCNH8Q96L42 1107 aa21.36■■□□□ 1.01
MUC1-229ENST00000620770 COL17A1Q9UMD9 1497 aaPredicted RBP21.36■■□□□ 1.01
MUC1-229ENST00000620770 CCDC18Q5T9S5 1454 aa21.35■■□□□ 1.01
MUC1-229ENST00000620770 ABCA9Q8IUA7 1624 aa21.34■■□□□ 1.01
MUC1-229ENST00000620770 PLEKHD1A6NEE1 506 aa21.28■■□□□ 1
MUC1-229ENST00000620770 CDK11AQ9UQ88 783 aaPredicted RBP21.26■□□□□ 0.99
MUC1-229ENST00000620770 KDM4FA0A1W2PPD8 638 aa21.25■□□□□ 0.99
MUC1-229ENST00000620770 ADGRL1O94910 1474 aa21.24■□□□□ 0.99
MUC1-229ENST00000620770 TIAM1Q13009 1591 aa21.23■□□□□ 0.99
MUC1-229ENST00000620770 APLP2Q06481 763 aa21.22■□□□□ 0.99
MUC1-229ENST00000620770 ARAP3Q8WWN8 1544 aa21.22■□□□□ 0.99
MUC1-229ENST00000620770 TROQ12816 1431 aaPredicted RBP21.21■□□□□ 0.99
MUC1-229ENST00000620770 MTUS2Q5JR59 1369 aa21.2■□□□□ 0.98
MUC1-229ENST00000620770 PHLDB1Q86UU1 1377 aa21.18■□□□□ 0.98
MUC1-229ENST00000620770 NEO1Q92859 1461 aa21.18■□□□□ 0.98
MUC1-229ENST00000620770 KIF14Q15058 1648 aa21.17■□□□□ 0.98
MUC1-229ENST00000620770 CFAP74Q9C0B2 1584 aa21.16■□□□□ 0.98
MUC1-229ENST00000620770 EHBP1L1Q8N3D4 1523 aa21.15■□□□□ 0.98
MUC1-229ENST00000620770 MAP3K1Q13233 1512 aa21.14■□□□□ 0.98
MUC1-229ENST00000620770 TTC37Q6PGP7 1564 aa21.13■□□□□ 0.97
MUC1-229ENST00000620770 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.13■□□□□ 0.97
MUC1-229ENST00000620770 LRRC9Q6ZRR7 1453 aa21.12■□□□□ 0.97
MUC1-229ENST00000620770 KANK4Q5T7N3 995 aaPredicted RBP21.11■□□□□ 0.97
MUC1-229ENST00000620770 FRMPD1Q5SYB0 1578 aa21.1■□□□□ 0.97
MUC1-229ENST00000620770 RICTORQ6R327 1708 aa21.06■□□□□ 0.96
MUC1-229ENST00000620770 FANCAO15360 1455 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms