RNA–Protein interactions for RNA: ENST00000620404.1

SLC38A3-207, Transcript of solute carrier family 38 member 3, humanhuman

TSL 3

Gene SLC38A3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3-207ENST00000620404 CARMIL1Q5VZK9 1371 aa23.8■■□□□ 1.4
SLC38A3-207ENST00000620404 PRG4Q92954 1404 aaPredicted RBP23.8■■□□□ 1.4
SLC38A3-207ENST00000620404 RUSC2Q8N2Y8 1516 aa23.76■■□□□ 1.39
SLC38A3-207ENST00000620404 KIAA0586Q9BVV6 1533 aa23.74■■□□□ 1.39
SLC38A3-207ENST00000620404 RAPGEF2Q9Y4G8 1499 aa23.6■■□□□ 1.37
SLC38A3-207ENST00000620404 IQGAP2Q13576 1575 aa23.53■■□□□ 1.36
SLC38A3-207ENST00000620404 NPM1P06748 294 aaKnown RBP eCLIP23.53■■□□□ 1.36
SLC38A3-207ENST00000620404 CARMIL2Q6F5E8 1435 aa23.51■■□□□ 1.35
SLC38A3-207ENST00000620404 TTBK1Q5TCY1 1321 aaPredicted RBP23.49■■□□□ 1.35
SLC38A3-207ENST00000620404 PTPRGP23470 1445 aa23.49■■□□□ 1.35
SLC38A3-207ENST00000620404 TNIKQ9UKE5 1360 aa23.46■■□□□ 1.35
SLC38A3-207ENST00000620404 ADCY10Q96PN6 1610 aa23.44■■□□□ 1.34
SLC38A3-207ENST00000620404 PRXQ9BXM0 1461 aa23.41■■□□□ 1.34
SLC38A3-207ENST00000620404 DISP1Q96F81 1524 aa23.39■■□□□ 1.34
SLC38A3-207ENST00000620404 UGGT2Q9NYU1 1516 aa23.39■■□□□ 1.34
SLC38A3-207ENST00000620404 CSRNP3Q8WYN3 585 aa23.39■■□□□ 1.33
SLC38A3-207ENST00000620404 KIF13AQ9H1H9 1805 aa23.38■■□□□ 1.33
SLC38A3-207ENST00000620404 CTTNBP2Q8WZ74 1663 aa23.37■■□□□ 1.33
SLC38A3-207ENST00000620404 FAM69CQ0P6D2 419 aa23.35■■□□□ 1.33
SLC38A3-207ENST00000620404 MAPKBP1O60336 1514 aa23.34■■□□□ 1.33
SLC38A3-207ENST00000620404 ABCC10Q5T3U5 1492 aa23.31■■□□□ 1.32
SLC38A3-207ENST00000620404 KIAA0556O60303 1618 aa23.3■■□□□ 1.32
SLC38A3-207ENST00000620404 UACAQ9BZF9 1416 aa23.3■■□□□ 1.32
SLC38A3-207ENST00000620404 ABCC2Q92887 1545 aa23.28■■□□□ 1.32
SLC38A3-207ENST00000620404 EEA1Q15075 1411 aa23.28■■□□□ 1.32
SLC38A3-207ENST00000620404 FAM9AQ8IZU1 332 aaPredicted RBP23.27■■□□□ 1.32
SLC38A3-207ENST00000620404 UHRF1BP1LA0JNW5 1464 aa23.27■■□□□ 1.32
SLC38A3-207ENST00000620404 GOLGA3Q08378 1498 aa23.26■■□□□ 1.31
SLC38A3-207ENST00000620404 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
SLC38A3-207ENST00000620404 DIP2BQ9P265 1576 aa23.23■■□□□ 1.31
SLC38A3-207ENST00000620404 ASXL2Q76L83 1435 aa23.18■■□□□ 1.3
SLC38A3-207ENST00000620404 PLB1Q6P1J6 1458 aa23.17■■□□□ 1.3
SLC38A3-207ENST00000620404 KDM5BQ9UGL1 1544 aa23.17■■□□□ 1.3
SLC38A3-207ENST00000620404 P3H3Q8IVL6 736 aa23.16■■□□□ 1.3
SLC38A3-207ENST00000620404 TSPOAP1O95153 1857 aa23.15■■□□□ 1.3
SLC38A3-207ENST00000620404 ZCCHC11Q5TAX3 1644 aaKnown RBP23.11■■□□□ 1.29
SLC38A3-207ENST00000620404 RANGAP1P46060 587 aaPredicted RBP23.08■■□□□ 1.29
SLC38A3-207ENST00000620404 ABCA8O94911 1581 aa23.08■■□□□ 1.29
SLC38A3-207ENST00000620404 GLI2P10070 1586 aa23.06■■□□□ 1.28
SLC38A3-207ENST00000620404 KIF21BO75037 1637 aa23.04■■□□□ 1.28
SLC38A3-207ENST00000620404 SAMD9Q5K651 1589 aa23.03■■□□□ 1.28
SLC38A3-207ENST00000620404 EPRSP07814 1512 aaKnown RBP23.03■■□□□ 1.28
SLC38A3-207ENST00000620404 EHMT2Q96KQ7 1210 aa23.01■■□□□ 1.27
SLC38A3-207ENST00000620404 WDR7Q9Y4E6 1490 aa22.98■■□□□ 1.27
SLC38A3-207ENST00000620404 KDM6BO15054 1643 aa22.98■■□□□ 1.27
SLC38A3-207ENST00000620404 UBTFP17480 764 aaKnown RBP22.98■■□□□ 1.27
SLC38A3-207ENST00000620404 KCNH8Q96L42 1107 aa22.98■■□□□ 1.27
SLC38A3-207ENST00000620404 ARID3CA6NKF2 412 aa22.97■■□□□ 1.27
SLC38A3-207ENST00000620404 PPRC1Q5VV67 1664 aaKnown RBP22.95■■□□□ 1.26
SLC38A3-207ENST00000620404 MAP3K4Q9Y6R4 1608 aa22.93■■□□□ 1.26
SLC38A3-207ENST00000620404 ATP10BO94823 1461 aa22.92■■□□□ 1.26
SLC38A3-207ENST00000620404 AEBP2Q6ZN18 517 aaPredicted RBP22.92■■□□□ 1.26
SLC38A3-207ENST00000620404 FHOD3Q2V2M9 1422 aa22.91■■□□□ 1.26
SLC38A3-207ENST00000620404 RAPGEF6Q8TEU7 1601 aa22.9■■□□□ 1.26
SLC38A3-207ENST00000620404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.89■■□□□ 1.25
SLC38A3-207ENST00000620404 HNRNPUL2Q1KMD3 747 aaKnown RBP22.89■■□□□ 1.25
SLC38A3-207ENST00000620404 TEX14Q8IWB6 1497 aa22.87■■□□□ 1.25
SLC38A3-207ENST00000620404 EFCAB5A4FU69 1503 aa22.87■■□□□ 1.25
SLC38A3-207ENST00000620404 CD109Q6YHK3 1445 aa22.86■■□□□ 1.25
SLC38A3-207ENST00000620404 CFAP43Q8NDM7 1665 aa22.84■■□□□ 1.25
SLC38A3-207ENST00000620404 NUP153P49790 1475 aaKnown RBP22.81■■□□□ 1.24
SLC38A3-207ENST00000620404 COL17A1Q9UMD9 1497 aaPredicted RBP22.8■■□□□ 1.24
SLC38A3-207ENST00000620404 MAGI3Q5TCQ9 1506 aa22.79■■□□□ 1.24
SLC38A3-207ENST00000620404 PLEKHD1A6NEE1 506 aa22.76■■□□□ 1.23
SLC38A3-207ENST00000620404 ARHGAP35Q9NRY4 1499 aa22.73■■□□□ 1.23
SLC38A3-207ENST00000620404 ATP1B4Q9UN42 357 aaPredicted RBP22.72■■□□□ 1.23
SLC38A3-207ENST00000620404 ABCA9Q8IUA7 1624 aa22.71■■□□□ 1.23
SLC38A3-207ENST00000620404 FMN1Q68DA7 1419 aa22.7■■□□□ 1.22
SLC38A3-207ENST00000620404 KDM4FA0A1W2PPD8 638 aa22.65■■□□□ 1.22
SLC38A3-207ENST00000620404 PHLDB1Q86UU1 1377 aa22.63■■□□□ 1.21
SLC38A3-207ENST00000620404 CDK13Q14004 1512 aaKnown RBP22.62■■□□□ 1.21
SLC38A3-207ENST00000620404 ARAP3Q8WWN8 1544 aa22.62■■□□□ 1.21
SLC38A3-207ENST00000620404 HECW1Q76N89 1606 aa22.6■■□□□ 1.21
SLC38A3-207ENST00000620404 CDK11AQ9UQ88 783 aaPredicted RBP22.59■■□□□ 1.21
SLC38A3-207ENST00000620404 NEO1Q92859 1461 aa22.58■■□□□ 1.2
SLC38A3-207ENST00000620404 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.56■■□□□ 1.2
SLC38A3-207ENST00000620404 RAPGEF3O95398 923 aa22.55■■□□□ 1.2
SLC38A3-207ENST00000620404 CLIP1P30622 1438 aa22.51■■□□□ 1.19
SLC38A3-207ENST00000620404 ADGRL1O94910 1474 aa22.5■■□□□ 1.19
SLC38A3-207ENST00000620404 TTC37Q6PGP7 1564 aa22.5■■□□□ 1.19
SLC38A3-207ENST00000620404 AKNAQ7Z591 1439 aa22.48■■□□□ 1.19
SLC38A3-207ENST00000620404 CASKIN1Q8WXD9 1431 aa22.48■■□□□ 1.19
SLC38A3-207ENST00000620404 LRRIQ1Q96JM4 1722 aa22.48■■□□□ 1.19
SLC38A3-207ENST00000620404 FANCAO15360 1455 aa22.48■■□□□ 1.19
SLC38A3-207ENST00000620404 TROQ12816 1431 aaPredicted RBP22.45■■□□□ 1.18
SLC38A3-207ENST00000620404 PLCH2O75038 1416 aa22.44■■□□□ 1.18
SLC38A3-207ENST00000620404 CFAP74Q9C0B2 1584 aa22.44■■□□□ 1.18
SLC38A3-207ENST00000620404 PCF11O94913 1555 aaKnown RBP22.43■■□□□ 1.18
SLC38A3-207ENST00000620404 DENND4BO75064 1496 aaPredicted RBP22.43■■□□□ 1.18
SLC38A3-207ENST00000620404 CCDC18Q5T9S5 1454 aa22.41■■□□□ 1.18
SLC38A3-207ENST00000620404 EFCAB2Q5VUJ9 269 aa22.41■■□□□ 1.18
SLC38A3-207ENST00000620404 KIF14Q15058 1648 aa22.4■■□□□ 1.18
SLC38A3-207ENST00000620404 FRMPD1Q5SYB0 1578 aa22.4■■□□□ 1.18
SLC38A3-207ENST00000620404 MYO5CQ9NQX4 1742 aa22.4■■□□□ 1.18
SLC38A3-207ENST00000620404 FYCO1Q9BQS8 1478 aa22.38■■□□□ 1.17
SLC38A3-207ENST00000620404 RICTORQ6R327 1708 aa22.37■■□□□ 1.17
SLC38A3-207ENST00000620404 SCAPERQ9BY12 1400 aa22.36■■□□□ 1.17
SLC38A3-207ENST00000620404 LOC105371045A0A1W2PR82 267 aa22.33■■□□□ 1.17
SLC38A3-207ENST00000620404 ARID4BQ4LE39 1312 aaPredicted RBP22.32■■□□□ 1.16
SLC38A3-207ENST00000620404 CEP162Q5TB80 1403 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms