RNA–Protein interactions for RNA: ENST00000620391.4

ITGB6-211, Transcript of integrin subunit beta 6, humanhuman

TSL 3 BASIC

Gene ITGB6, Length 4,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-211ENST00000620391 GOLGA3Q08378 1498 aa13.41□□□□□ -0.26
ITGB6-211ENST00000620391 ABCC9O60706 1549 aa13.37□□□□□ -0.27
ITGB6-211ENST00000620391 LAS1LQ9Y4W2 734 aaKnown RBP13.37□□□□□ -0.27
ITGB6-211ENST00000620391 WDR43Q15061 677 aaKnown RBP eCLIP13.36□□□□□ -0.27
ITGB6-211ENST00000620391 TIMELESSQ9UNS1 1208 aa13.36□□□□□ -0.27
ITGB6-211ENST00000620391 B4GALNT3Q6L9W6 998 aa13.35□□□□□ -0.27
ITGB6-211ENST00000620391 RSF1Q96T23 1441 aaPredicted RBP13.35□□□□□ -0.27
ITGB6-211ENST00000620391 TNNT2P45379 298 aaPredicted RBP13.34□□□□□ -0.27
ITGB6-211ENST00000620391 NAP1L5Q96NT1 182 aaPredicted RBP13.33□□□□□ -0.28
ITGB6-211ENST00000620391 GOLGA6L22H0YM25 854 aa13.31□□□□□ -0.28
ITGB6-211ENST00000620391 ZNF777Q9ULD5 760 aaPredicted RBP13.3□□□□□ -0.28
ITGB6-211ENST00000620391 CHIC2Q9UKJ5 165 aa13.3□□□□□ -0.28
ITGB6-211ENST00000620391 SCRIBQ14160 1630 aa13.29□□□□□ -0.28
ITGB6-211ENST00000620391 MTUS2Q5JR59 1369 aa13.28□□□□□ -0.28
ITGB6-211ENST00000620391 ARID3CA6NKF2 412 aa13.27□□□□□ -0.29
ITGB6-211ENST00000620391 CEP164Q9UPV0 1460 aa13.25□□□□□ -0.29
ITGB6-211ENST00000620391 L1TD1Q5T7N2 865 aaKnown RBP13.25□□□□□ -0.29
ITGB6-211ENST00000620391 SIN3AQ96ST3 1273 aa13.24□□□□□ -0.29
ITGB6-211ENST00000620391 CCNB3Q8WWL7 1395 aa13.2□□□□□ -0.3
ITGB6-211ENST00000620391 IPO9Q96P70 1041 aaKnown RBP13.19□□□□□ -0.3
ITGB6-211ENST00000620391 KDM2AQ9Y2K7 1162 aa13.19□□□□□ -0.3
ITGB6-211ENST00000620391 NCLP19338 710 aaKnown RBP13.18□□□□□ -0.3
ITGB6-211ENST00000620391 RRP7BPQ9NSQ0 103 aa13.18□□□□□ -0.3
ITGB6-211ENST00000620391 TCERG1O14776 1098 aaKnown RBP13.17□□□□□ -0.3
ITGB6-211ENST00000620391 FANCIQ9NVI1 1328 aa13.17□□□□□ -0.3
ITGB6-211ENST00000620391 RGS3P49796 1198 aa13.16□□□□□ -0.3
ITGB6-211ENST00000620391 USP35Q9P2H5 1018 aa13.16□□□□□ -0.3
ITGB6-211ENST00000620391 WRNQ14191 1432 aaPredicted RBP eCLIP13.16□□□□□ -0.3
ITGB6-211ENST00000620391 PTMAP06454 111 aaKnown RBP13.16□□□□□ -0.3
ITGB6-211ENST00000620391 MYH16Q9H6N6 1097 aa13.16□□□□□ -0.3
ITGB6-211ENST00000620391 SLC24A1O60721 1099 aa13.14□□□□□ -0.31
ITGB6-211ENST00000620391 TSPY4P0CV99 314 aa13.14□□□□□ -0.31
ITGB6-211ENST00000620391 TSPY10P0CW01 314 aa13.14□□□□□ -0.31
ITGB6-211ENST00000620391 DNTTIP2Q5QJE6 756 aaKnown RBP13.14□□□□□ -0.31
ITGB6-211ENST00000620391 RB1CC1Q8TDY2 1594 aa13.14□□□□□ -0.31
ITGB6-211ENST00000620391 PNNQ9H307 717 aaKnown RBP13.13□□□□□ -0.31
ITGB6-211ENST00000620391 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.13□□□□□ -0.31
ITGB6-211ENST00000620391 SENP3-EIF4A1A0A087X0R7 540 aa13.11□□□□□ -0.31
ITGB6-211ENST00000620391 VPS8Q8N3P4 1428 aa13.11□□□□□ -0.31
ITGB6-211ENST00000620391 FBLN2P98095 1184 aa13.11□□□□□ -0.31
ITGB6-211ENST00000620391 CARD11Q9BXL7 1154 aa13.08□□□□□ -0.31
ITGB6-211ENST00000620391 CDCA8Q53HL2 280 aa13.08□□□□□ -0.32
ITGB6-211ENST00000620391 SETD5Q9C0A6 1442 aa13.08□□□□□ -0.32
ITGB6-211ENST00000620391 KNSTRNQ9Y448 316 aa13.07□□□□□ -0.32
ITGB6-211ENST00000620391 RSPH6AQ9H0K4 717 aa13.07□□□□□ -0.32
ITGB6-211ENST00000620391 MSNP26038 577 aaKnown RBP13.06□□□□□ -0.32
ITGB6-211ENST00000620391 PPP1R15AO75807 674 aaPredicted RBP13.04□□□□□ -0.32
ITGB6-211ENST00000620391 HSPA5P11021 654 aaKnown RBP13.04□□□□□ -0.32
ITGB6-211ENST00000620391 CDK11BP21127 795 aaKnown RBP13.04□□□□□ -0.32
ITGB6-211ENST00000620391 FTSJ3Q8IY81 847 aaKnown RBP13.04□□□□□ -0.32
ITGB6-211ENST00000620391 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.04□□□□□ -0.32
ITGB6-211ENST00000620391 KIF27Q86VH2 1401 aa13.03□□□□□ -0.32
ITGB6-211ENST00000620391 HSP90AB1P08238 724 aaKnown RBP13.03□□□□□ -0.32
ITGB6-211ENST00000620391 MS4A1P11836 297 aa13.03□□□□□ -0.32
ITGB6-211ENST00000620391 HSCBQ8IWL3 235 aa13.03□□□□□ -0.32
ITGB6-211ENST00000620391 NUDCQ9Y266 331 aa13.03□□□□□ -0.32
ITGB6-211ENST00000620391 CHGAP10645 457 aaKnown RBP13.02□□□□□ -0.32
ITGB6-211ENST00000620391 RCAN3Q9UKA8 241 aa13.02□□□□□ -0.32
ITGB6-211ENST00000620391 CFAP53Q96M91 514 aa13.02□□□□□ -0.33
ITGB6-211ENST00000620391 SOGA1O94964 1423 aa13.01□□□□□ -0.33
ITGB6-211ENST00000620391 CASC1Q6TDU7 716 aa13.01□□□□□ -0.33
ITGB6-211ENST00000620391 PTMSP20962 102 aa13□□□□□ -0.33
ITGB6-211ENST00000620391 CHMP4BQ9H444 224 aaKnown RBP12.99□□□□□ -0.33
ITGB6-211ENST00000620391 RAB3GAP2Q9H2M9 1393 aa12.99□□□□□ -0.33
ITGB6-211ENST00000620391 FHAD1B1AJZ9 1412 aa12.99□□□□□ -0.33
ITGB6-211ENST00000620391 GSE1Q14687 1217 aa12.98□□□□□ -0.33
ITGB6-211ENST00000620391 GOLGA6L3A6NEY3 463 aa12.98□□□□□ -0.33
ITGB6-211ENST00000620391 FRAT1Q92837 279 aaPredicted RBP12.98□□□□□ -0.33
ITGB6-211ENST00000620391 CHAF1AQ13111 956 aaPredicted RBP12.97□□□□□ -0.33
ITGB6-211ENST00000620391 HSP90AA2PQ14568 343 aaPredicted RBP12.97□□□□□ -0.33
ITGB6-211ENST00000620391 KCNH8Q96L42 1107 aa12.96□□□□□ -0.33
ITGB6-211ENST00000620391 GBP4Q96PP9 640 aa12.96□□□□□ -0.33
ITGB6-211ENST00000620391 RGL3Q3MIN7 710 aa12.95□□□□□ -0.34
ITGB6-211ENST00000620391 DHX57Q6P158 1386 aaKnown RBP12.95□□□□□ -0.34
ITGB6-211ENST00000620391 PDE3BQ13370 1112 aa12.95□□□□□ -0.34
ITGB6-211ENST00000620391 SLKQ9H2G2 1235 aaPredicted RBP12.94□□□□□ -0.34
ITGB6-211ENST00000620391 KANK4Q5T7N3 995 aaPredicted RBP12.94□□□□□ -0.34
ITGB6-211ENST00000620391 RALBP1Q15311 655 aa12.93□□□□□ -0.34
ITGB6-211ENST00000620391 ARID4BQ4LE39 1312 aaPredicted RBP12.92□□□□□ -0.34
ITGB6-211ENST00000620391 PDE4AP27815 886 aa12.92□□□□□ -0.34
ITGB6-211ENST00000620391 CC2D1BQ5T0F9 858 aaKnown RBP12.92□□□□□ -0.34
ITGB6-211ENST00000620391 CFAP44Q96MT7 982 aa12.92□□□□□ -0.34
ITGB6-211ENST00000620391 PLCB2Q00722 1185 aa12.91□□□□□ -0.34
ITGB6-211ENST00000620391 NEUROD2Q15784 382 aa12.91□□□□□ -0.34
ITGB6-211ENST00000620391 GZF1Q9H116 711 aaPredicted RBP12.91□□□□□ -0.34
ITGB6-211ENST00000620391 ZRSR1Q15695 479 aaKnown RBP12.91□□□□□ -0.34
ITGB6-211ENST00000620391 VSIG10Q8N0Z9 540 aa12.9□□□□□ -0.34
ITGB6-211ENST00000620391 CFDP1Q9UEE9 299 aaPredicted RBP12.9□□□□□ -0.34
ITGB6-211ENST00000620391 ZBED9Q6R2W3 1325 aa12.9□□□□□ -0.34
ITGB6-211ENST00000620391 TMF1P82094 1093 aa12.89□□□□□ -0.35
ITGB6-211ENST00000620391 KTN1Q86UP2 1357 aaKnown RBP12.89□□□□□ -0.35
ITGB6-211ENST00000620391 SPRYD3Q8NCJ5 442 aa12.89□□□□□ -0.35
ITGB6-211ENST00000620391 NRDCO43847 1150 aa12.88□□□□□ -0.35
ITGB6-211ENST00000620391 KIAA2012Q0VF49 1180 aa12.87□□□□□ -0.35
ITGB6-211ENST00000620391 MAPK8IP3Q9UPT6 1336 aa12.87□□□□□ -0.35
ITGB6-211ENST00000620391 BAZ1AQ9NRL2 1556 aaPredicted RBP12.86□□□□□ -0.35
ITGB6-211ENST00000620391 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
ITGB6-211ENST00000620391 GOLGA6L6A8MZA4 724 aa12.86□□□□□ -0.35
ITGB6-211ENST00000620391 RWDD1Q9H446 243 aaPredicted RBP12.86□□□□□ -0.35
ITGB6-211ENST00000620391 PLEKHD1A6NEE1 506 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms