RNA–Protein interactions for RNA: ENST00000619859.1

HM13-225, Transcript of histocompatibility minor 13, human

TSL 3

Gene HM13, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HM13-225	ENST00000619859	TRH	P20396	242 aa	Predicted RBP	11.77	□□□□□ -0.53
HM13-225	ENST00000619859	PRG4	Q92954	1404 aa	Predicted RBP	11.75	□□□□□ -0.53
HM13-225	ENST00000619859	JPH4	Q96JJ6	628 aa		11.74	□□□□□ -0.53
HM13-225	ENST00000619859	KIAA0586	Q9BVV6	1533 aa		11.73	□□□□□ -0.53
HM13-225	ENST00000619859	CARMIL1	Q5VZK9	1371 aa		11.7	□□□□□ -0.54
HM13-225	ENST00000619859	KIF13A	Q9H1H9	1805 aa		11.65	□□□□□ -0.54
HM13-225	ENST00000619859	IQGAP2	Q13576	1575 aa		11.64	□□□□□ -0.55
HM13-225	ENST00000619859	ADCY10	Q96PN6	1610 aa		11.64	□□□□□ -0.55
HM13-225	ENST00000619859	RAPGEF2	Q9Y4G8	1499 aa		11.62	□□□□□ -0.55
HM13-225	ENST00000619859	MAPKBP1	O60336	1514 aa		11.61	□□□□□ -0.55
HM13-225	ENST00000619859	CARMIL2	Q6F5E8	1435 aa		11.6	□□□□□ -0.55
HM13-225	ENST00000619859	PTPRG	P23470	1445 aa		11.58	□□□□□ -0.56
HM13-225	ENST00000619859	CTTNBP2	Q8WZ74	1663 aa		11.58	□□□□□ -0.56
HM13-225	ENST00000619859	TNIK	Q9UKE5	1360 aa		11.57	□□□□□ -0.56
HM13-225	ENST00000619859	UGGT2	Q9NYU1	1516 aa		11.57	□□□□□ -0.56
HM13-225	ENST00000619859	NPM1	P06748	294 aa	Known RBP eCLIP	11.57	□□□□□ -0.56
HM13-225	ENST00000619859	ABCC10	Q5T3U5	1492 aa		11.57	□□□□□ -0.56
HM13-225	ENST00000619859	DISP1	Q96F81	1524 aa		11.56	□□□□□ -0.56
HM13-225	ENST00000619859	DIP2B	Q9P265	1576 aa		11.55	□□□□□ -0.56
HM13-225	ENST00000619859	KIAA0556	O60303	1618 aa		11.53	□□□□□ -0.56
HM13-225	ENST00000619859	UHRF1BP1L	A0JNW5	1464 aa		11.53	□□□□□ -0.56
HM13-225	ENST00000619859	PRX	Q9BXM0	1461 aa		11.53	□□□□□ -0.56
HM13-225	ENST00000619859	ABCC2	Q92887	1545 aa		11.53	□□□□□ -0.56
HM13-225	ENST00000619859	FAM69C	Q0P6D2	419 aa		11.51	□□□□□ -0.57
HM13-225	ENST00000619859	UACA	Q9BZF9	1416 aa		11.51	□□□□□ -0.57
HM13-225	ENST00000619859	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.49	□□□□□ -0.57
HM13-225	ENST00000619859	TSPOAP1	O95153	1857 aa		11.48	□□□□□ -0.57
HM13-225	ENST00000619859	KDM5B	Q9UGL1	1544 aa		11.47	□□□□□ -0.57
HM13-225	ENST00000619859	GOLGA3	Q08378	1498 aa		11.47	□□□□□ -0.57
HM13-225	ENST00000619859	PLB1	Q6P1J6	1458 aa		11.46	□□□□□ -0.57
HM13-225	ENST00000619859	ASXL2	Q76L83	1435 aa		11.46	□□□□□ -0.57
HM13-225	ENST00000619859	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.46	□□□□□ -0.58
HM13-225	ENST00000619859	GLI2	P10070	1586 aa		11.45	□□□□□ -0.58
HM13-225	ENST00000619859	EEA1	Q15075	1411 aa		11.44	□□□□□ -0.58
HM13-225	ENST00000619859	PPRC1	Q5VV67	1664 aa	Known RBP	11.43	□□□□□ -0.58
HM13-225	ENST00000619859	CSRNP3	Q8WYN3	585 aa		11.43	□□□□□ -0.58
HM13-225	ENST00000619859	KDM6B	O15054	1643 aa		11.42	□□□□□ -0.58
HM13-225	ENST00000619859	ABCA8	O94911	1581 aa		11.42	□□□□□ -0.58
HM13-225	ENST00000619859	MAP3K4	Q9Y6R4	1608 aa		11.41	□□□□□ -0.58
HM13-225	ENST00000619859	EPRS	P07814	1512 aa	Known RBP	11.4	□□□□□ -0.58
HM13-225	ENST00000619859	SAMD9	Q5K651	1589 aa		11.39	□□□□□ -0.59
HM13-225	ENST00000619859	WDR7	Q9Y4E6	1490 aa		11.38	□□□□□ -0.59
HM13-225	ENST00000619859	AEBP2	Q6ZN18	517 aa	Predicted RBP	11.37	□□□□□ -0.59
HM13-225	ENST00000619859	KIF21B	O75037	1637 aa		11.36	□□□□□ -0.59
HM13-225	ENST00000619859	CFAP43	Q8NDM7	1665 aa		11.34	□□□□□ -0.59
HM13-225	ENST00000619859	TEX14	Q8IWB6	1497 aa		11.34	□□□□□ -0.59
HM13-225	ENST00000619859	RAPGEF6	Q8TEU7	1601 aa		11.32	□□□□□ -0.6
HM13-225	ENST00000619859	P3H3	Q8IVL6	736 aa		11.32	□□□□□ -0.6
HM13-225	ENST00000619859	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.32	□□□□□ -0.6
HM13-225	ENST00000619859	ATP10B	O94823	1461 aa		11.31	□□□□□ -0.6
HM13-225	ENST00000619859	MAGI3	Q5TCQ9	1506 aa		11.3	□□□□□ -0.6
HM13-225	ENST00000619859	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.29	□□□□□ -0.6
HM13-225	ENST00000619859	EFCAB5	A4FU69	1503 aa		11.29	□□□□□ -0.6
HM13-225	ENST00000619859	CD109	Q6YHK3	1445 aa		11.28	□□□□□ -0.6
HM13-225	ENST00000619859	KCNH8	Q96L42	1107 aa		11.27	□□□□□ -0.61
HM13-225	ENST00000619859	FHOD3	Q2V2M9	1422 aa		11.26	□□□□□ -0.61
HM13-225	ENST00000619859	NUP153	P49790	1475 aa	Known RBP	11.26	□□□□□ -0.61
HM13-225	ENST00000619859	ABCA9	Q8IUA7	1624 aa		11.26	□□□□□ -0.61
HM13-225	ENST00000619859	ARID3C	A6NKF2	412 aa		11.24	□□□□□ -0.61
HM13-225	ENST00000619859	KDM4F	A0A1W2PPD8	638 aa		11.23	□□□□□ -0.61
HM13-225	ENST00000619859	RANGAP1	P46060	587 aa	Predicted RBP	11.23	□□□□□ -0.61
HM13-225	ENST00000619859	ARAP3	Q8WWN8	1544 aa		11.21	□□□□□ -0.61
HM13-225	ENST00000619859	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.19	□□□□□ -0.62
HM13-225	ENST00000619859	UBTF	P17480	764 aa	Known RBP	11.19	□□□□□ -0.62
HM13-225	ENST00000619859	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.19	□□□□□ -0.62
HM13-225	ENST00000619859	ADGRL1	O94910	1474 aa		11.19	□□□□□ -0.62
HM13-225	ENST00000619859	PHLDB1	Q86UU1	1377 aa		11.18	□□□□□ -0.62
HM13-225	ENST00000619859	NEO1	Q92859	1461 aa		11.18	□□□□□ -0.62
HM13-225	ENST00000619859	ARHGAP35	Q9NRY4	1499 aa		11.18	□□□□□ -0.62
HM13-225	ENST00000619859	FMN1	Q68DA7	1419 aa		11.17	□□□□□ -0.62
HM13-225	ENST00000619859	PLEKHD1	A6NEE1	506 aa		11.16	□□□□□ -0.62
HM13-225	ENST00000619859	HECW1	Q76N89	1606 aa		11.16	□□□□□ -0.62
HM13-225	ENST00000619859	CDK13	Q14004	1512 aa	Known RBP	11.15	□□□□□ -0.62
HM13-225	ENST00000619859	EHMT2	Q96KQ7	1210 aa		11.15	□□□□□ -0.62
HM13-225	ENST00000619859	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
HM13-225	ENST00000619859	TTC37	Q6PGP7	1564 aa		11.14	□□□□□ -0.63
HM13-225	ENST00000619859	CFAP74	Q9C0B2	1584 aa		11.14	□□□□□ -0.63
HM13-225	ENST00000619859	FRMPD1	Q5SYB0	1578 aa		11.13	□□□□□ -0.63
HM13-225	ENST00000619859	LRRIQ1	Q96JM4	1722 aa		11.12	□□□□□ -0.63
HM13-225	ENST00000619859	RICTOR	Q6R327	1708 aa		11.12	□□□□□ -0.63
HM13-225	ENST00000619859	FANCA	O15360	1455 aa		11.1	□□□□□ -0.63
HM13-225	ENST00000619859	RAPGEF3	O95398	923 aa		11.09	□□□□□ -0.63
HM13-225	ENST00000619859	MYO5C	Q9NQX4	1742 aa		11.09	□□□□□ -0.63
HM13-225	ENST00000619859	AKNA	Q7Z591	1439 aa		11.09	□□□□□ -0.63
HM13-225	ENST00000619859	DENND4B	O75064	1496 aa	Predicted RBP	11.08	□□□□□ -0.64
HM13-225	ENST00000619859	KIF14	Q15058	1648 aa		11.07	□□□□□ -0.64
HM13-225	ENST00000619859	ARHGEF40	Q8TER5	1519 aa		11.07	□□□□□ -0.64
HM13-225	ENST00000619859	PLCH2	O75038	1416 aa		11.07	□□□□□ -0.64
HM13-225	ENST00000619859	PCF11	O94913	1555 aa	Known RBP	11.07	□□□□□ -0.64
HM13-225	ENST00000619859	ZMYM4	Q5VZL5	1548 aa		11.06	□□□□□ -0.64
HM13-225	ENST00000619859	ADAMTSL3	P82987	1691 aa		11.06	□□□□□ -0.64
HM13-225	ENST00000619859	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.06	□□□□□ -0.64
HM13-225	ENST00000619859	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.06	□□□□□ -0.64
HM13-225	ENST00000619859	TRO	Q12816	1431 aa	Predicted RBP	11.06	□□□□□ -0.64
HM13-225	ENST00000619859	CASKIN1	Q8WXD9	1431 aa		11.06	□□□□□ -0.64
HM13-225	ENST00000619859	BCORL1	Q5H9F3	1711 aa		11.05	□□□□□ -0.64
HM13-225	ENST00000619859	CCDC18	Q5T9S5	1454 aa		11.05	□□□□□ -0.64
HM13-225	ENST00000619859	CLIP1	P30622	1438 aa		11.03	□□□□□ -0.64
HM13-225	ENST00000619859	FYCO1	Q9BQS8	1478 aa		11.03	□□□□□ -0.64
HM13-225	ENST00000619859	MAGI2	Q86UL8	1455 aa		11.02	□□□□□ -0.65

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