RNA–Protein interactions for RNA: ENST00000619117.1

C9orf50-202, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf50, Length 796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-202ENST00000619117 KIAA0586Q9BVV6 1533 aa26.06■■□□□ 1.76
C9orf50-202ENST00000619117 JPH4Q96JJ6 628 aa26.04■■□□□ 1.76
C9orf50-202ENST00000619117 PRG4Q92954 1404 aaPredicted RBP26.04■■□□□ 1.76
C9orf50-202ENST00000619117 RAPGEF2Q9Y4G8 1499 aa25.94■■□□□ 1.74
C9orf50-202ENST00000619117 IQGAP2Q13576 1575 aa25.87■■□□□ 1.73
C9orf50-202ENST00000619117 PRXQ9BXM0 1461 aa25.83■■□□□ 1.73
C9orf50-202ENST00000619117 TRHP20396 242 aaPredicted RBP25.8■■□□□ 1.72
C9orf50-202ENST00000619117 CARMIL2Q6F5E8 1435 aa25.77■■□□□ 1.72
C9orf50-202ENST00000619117 UGGT2Q9NYU1 1516 aa25.75■■□□□ 1.71
C9orf50-202ENST00000619117 EEA1Q15075 1411 aa25.73■■□□□ 1.71
C9orf50-202ENST00000619117 DISP1Q96F81 1524 aa25.71■■□□□ 1.71
C9orf50-202ENST00000619117 TNIKQ9UKE5 1360 aa25.7■■□□□ 1.71
C9orf50-202ENST00000619117 CTTNBP2Q8WZ74 1663 aa25.7■■□□□ 1.7
C9orf50-202ENST00000619117 ADCY10Q96PN6 1610 aa25.69■■□□□ 1.7
C9orf50-202ENST00000619117 PTPRGP23470 1445 aa25.69■■□□□ 1.7
C9orf50-202ENST00000619117 CSRNP3Q8WYN3 585 aa25.67■■□□□ 1.7
C9orf50-202ENST00000619117 KIAA0556O60303 1618 aa25.63■■□□□ 1.69
C9orf50-202ENST00000619117 CHIC1Q5VXU3 224 aa25.61■■□□□ 1.69
C9orf50-202ENST00000619117 MAPKBP1O60336 1514 aa25.6■■□□□ 1.69
C9orf50-202ENST00000619117 NPM1P06748 294 aaKnown RBP eCLIP25.57■■□□□ 1.68
C9orf50-202ENST00000619117 UHRF1BP1LA0JNW5 1464 aa25.56■■□□□ 1.68
C9orf50-202ENST00000619117 GOLGA3Q08378 1498 aa25.56■■□□□ 1.68
C9orf50-202ENST00000619117 ABCC2Q92887 1545 aa25.53■■□□□ 1.68
C9orf50-202ENST00000619117 TTBK1Q5TCY1 1321 aaPredicted RBP25.53■■□□□ 1.68
C9orf50-202ENST00000619117 UACAQ9BZF9 1416 aa25.53■■□□□ 1.68
C9orf50-202ENST00000619117 ABCC10Q5T3U5 1492 aa25.5■■□□□ 1.67
C9orf50-202ENST00000619117 KIF13AQ9H1H9 1805 aa25.48■■□□□ 1.67
C9orf50-202ENST00000619117 KIF21BO75037 1637 aa25.48■■□□□ 1.67
C9orf50-202ENST00000619117 FAM9AQ8IZU1 332 aaPredicted RBP25.47■■□□□ 1.67
C9orf50-202ENST00000619117 DIP2BQ9P265 1576 aa25.45■■□□□ 1.66
C9orf50-202ENST00000619117 KDM5BQ9UGL1 1544 aa25.42■■□□□ 1.66
C9orf50-202ENST00000619117 SAMD9Q5K651 1589 aa25.39■■□□□ 1.66
C9orf50-202ENST00000619117 FAM69CQ0P6D2 419 aa25.39■■□□□ 1.66
C9orf50-202ENST00000619117 PLB1Q6P1J6 1458 aa25.39■■□□□ 1.65
C9orf50-202ENST00000619117 ABCA8O94911 1581 aa25.38■■□□□ 1.65
C9orf50-202ENST00000619117 ASXL2Q76L83 1435 aa25.37■■□□□ 1.65
C9orf50-202ENST00000619117 ZCCHC11Q5TAX3 1644 aaKnown RBP25.34■■□□□ 1.65
C9orf50-202ENST00000619117 GLI2P10070 1586 aa25.27■■□□□ 1.64
C9orf50-202ENST00000619117 P3H3Q8IVL6 736 aa25.26■■□□□ 1.63
C9orf50-202ENST00000619117 EFCAB5A4FU69 1503 aa25.24■■□□□ 1.63
C9orf50-202ENST00000619117 EPRSP07814 1512 aaKnown RBP25.23■■□□□ 1.63
C9orf50-202ENST00000619117 WDR7Q9Y4E6 1490 aa25.22■■□□□ 1.63
C9orf50-202ENST00000619117 FHOD3Q2V2M9 1422 aa25.2■■□□□ 1.62
C9orf50-202ENST00000619117 RAPGEF6Q8TEU7 1601 aa25.17■■□□□ 1.62
C9orf50-202ENST00000619117 UBTFP17480 764 aaKnown RBP25.16■■□□□ 1.62
C9orf50-202ENST00000619117 RANGAP1P46060 587 aaPredicted RBP25.16■■□□□ 1.62
C9orf50-202ENST00000619117 MAP3K4Q9Y6R4 1608 aa25.14■■□□□ 1.61
C9orf50-202ENST00000619117 ATP10BO94823 1461 aa25.14■■□□□ 1.61
C9orf50-202ENST00000619117 TSPOAP1O95153 1857 aa25.13■■□□□ 1.61
C9orf50-202ENST00000619117 EHMT2Q96KQ7 1210 aa25.12■■□□□ 1.61
C9orf50-202ENST00000619117 PPRC1Q5VV67 1664 aaKnown RBP25.12■■□□□ 1.61
C9orf50-202ENST00000619117 NUP153P49790 1475 aaKnown RBP25.1■■□□□ 1.61
C9orf50-202ENST00000619117 KDM6BO15054 1643 aa25.08■■□□□ 1.61
C9orf50-202ENST00000619117 ARHGAP35Q9NRY4 1499 aa25.06■■□□□ 1.6
C9orf50-202ENST00000619117 TEX14Q8IWB6 1497 aa25.04■■□□□ 1.6
C9orf50-202ENST00000619117 ARID3CA6NKF2 412 aa25.04■■□□□ 1.6
C9orf50-202ENST00000619117 CFAP43Q8NDM7 1665 aa25.02■■□□□ 1.6
C9orf50-202ENST00000619117 MAGI3Q5TCQ9 1506 aa24.99■■□□□ 1.59
C9orf50-202ENST00000619117 FMN1Q68DA7 1419 aa24.99■■□□□ 1.59
C9orf50-202ENST00000619117 KCNH8Q96L42 1107 aa24.99■■□□□ 1.59
C9orf50-202ENST00000619117 CD109Q6YHK3 1445 aa24.98■■□□□ 1.59
C9orf50-202ENST00000619117 ABCA9Q8IUA7 1624 aa24.94■■□□□ 1.58
C9orf50-202ENST00000619117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.93■■□□□ 1.58
C9orf50-202ENST00000619117 HNRNPUL2Q1KMD3 747 aaKnown RBP24.93■■□□□ 1.58
C9orf50-202ENST00000619117 HECW1Q76N89 1606 aa24.9■■□□□ 1.58
C9orf50-202ENST00000619117 COL17A1Q9UMD9 1497 aaPredicted RBP24.9■■□□□ 1.58
C9orf50-202ENST00000619117 CDK13Q14004 1512 aaKnown RBP24.88■■□□□ 1.57
C9orf50-202ENST00000619117 PLEKHD1A6NEE1 506 aa24.85■■□□□ 1.57
C9orf50-202ENST00000619117 CLIP1P30622 1438 aa24.82■■□□□ 1.56
C9orf50-202ENST00000619117 ARAP3Q8WWN8 1544 aa24.78■■□□□ 1.56
C9orf50-202ENST00000619117 PHLDB1Q86UU1 1377 aa24.78■■□□□ 1.56
C9orf50-202ENST00000619117 CASKIN1Q8WXD9 1431 aa24.78■■□□□ 1.56
C9orf50-202ENST00000619117 PCF11O94913 1555 aaKnown RBP24.77■■□□□ 1.56
C9orf50-202ENST00000619117 NEO1Q92859 1461 aa24.77■■□□□ 1.56
C9orf50-202ENST00000619117 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.76■■□□□ 1.55
C9orf50-202ENST00000619117 ATP1B4Q9UN42 357 aaPredicted RBP24.76■■□□□ 1.55
C9orf50-202ENST00000619117 TTC37Q6PGP7 1564 aa24.73■■□□□ 1.55
C9orf50-202ENST00000619117 FYCO1Q9BQS8 1478 aa24.72■■□□□ 1.55
C9orf50-202ENST00000619117 LRRIQ1Q96JM4 1722 aa24.72■■□□□ 1.55
C9orf50-202ENST00000619117 CCDC18Q5T9S5 1454 aa24.71■■□□□ 1.55
C9orf50-202ENST00000619117 CDK11AQ9UQ88 783 aaPredicted RBP24.71■■□□□ 1.55
C9orf50-202ENST00000619117 TROQ12816 1431 aaPredicted RBP24.69■■□□□ 1.54
C9orf50-202ENST00000619117 AEBP2Q6ZN18 517 aaPredicted RBP24.67■■□□□ 1.54
C9orf50-202ENST00000619117 CFAP74Q9C0B2 1584 aa24.67■■□□□ 1.54
C9orf50-202ENST00000619117 FANCAO15360 1455 aa24.65■■□□□ 1.54
C9orf50-202ENST00000619117 KIF14Q15058 1648 aa24.65■■□□□ 1.54
C9orf50-202ENST00000619117 CEP162Q5TB80 1403 aa24.65■■□□□ 1.54
C9orf50-202ENST00000619117 PLCH2O75038 1416 aa24.62■■□□□ 1.53
C9orf50-202ENST00000619117 FRMPD1Q5SYB0 1578 aa24.61■■□□□ 1.53
C9orf50-202ENST00000619117 AKNAQ7Z591 1439 aa24.61■■□□□ 1.53
C9orf50-202ENST00000619117 KDM4FA0A1W2PPD8 638 aa24.59■■□□□ 1.53
C9orf50-202ENST00000619117 DENND4BO75064 1496 aaPredicted RBP24.57■■□□□ 1.52
C9orf50-202ENST00000619117 MYO5CQ9NQX4 1742 aa24.56■■□□□ 1.52
C9orf50-202ENST00000619117 RAPGEF3O95398 923 aa24.56■■□□□ 1.52
C9orf50-202ENST00000619117 ADGRL1O94910 1474 aa24.55■■□□□ 1.52
C9orf50-202ENST00000619117 RICTORQ6R327 1708 aa24.52■■□□□ 1.52
C9orf50-202ENST00000619117 LOC105371045A0A1W2PR82 267 aa24.51■■□□□ 1.51
C9orf50-202ENST00000619117 ZMYM4Q5VZL5 1548 aa24.5■■□□□ 1.51
C9orf50-202ENST00000619117 EFCAB2Q5VUJ9 269 aa24.49■■□□□ 1.51
C9orf50-202ENST00000619117 ARHGAP5Q13017 1502 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms