RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 PLEKHG5O94827 1062 aa6.62□□□□□ -1.35
UBE2D3-233ENST00000618836 PODXL2Q9NZ53 605 aa6.61□□□□□ -1.35
UBE2D3-233ENST00000618836 TOP2BQ02880 1626 aa6.58□□□□□ -1.36
UBE2D3-233ENST00000618836 SCAF1Q9H7N4 1312 aaKnown RBP6.56□□□□□ -1.36
UBE2D3-233ENST00000618836 HOXD11P31277 338 aaPredicted RBP6.56□□□□□ -1.36
UBE2D3-233ENST00000618836 MAPKBP1O60336 1514 aa6.56□□□□□ -1.36
UBE2D3-233ENST00000618836 FAM9AQ8IZU1 332 aaPredicted RBP6.55□□□□□ -1.36
UBE2D3-233ENST00000618836 GTF3C3Q9Y5Q9 886 aa6.55□□□□□ -1.36
UBE2D3-233ENST00000618836 DMRT2Q9Y5R5 561 aa6.55□□□□□ -1.36
UBE2D3-233ENST00000618836 SMARCA4P51532 1647 aa6.54□□□□□ -1.36
UBE2D3-233ENST00000618836 ATAD2BQ9ULI0 1458 aa6.54□□□□□ -1.36
UBE2D3-233ENST00000618836 TPRNQ4KMQ1 711 aa6.54□□□□□ -1.36
UBE2D3-233ENST00000618836 PPRC1Q5VV67 1664 aaKnown RBP6.53□□□□□ -1.36
UBE2D3-233ENST00000618836 SYNJ2O15056 1496 aa6.52□□□□□ -1.37
UBE2D3-233ENST00000618836 NPM2Q86SE8 214 aaKnown RBP6.52□□□□□ -1.37
UBE2D3-233ENST00000618836 FBXO3Q9UK99 471 aa6.52□□□□□ -1.37
UBE2D3-233ENST00000618836 SHROOM2Q13796 1616 aa6.51□□□□□ -1.37
UBE2D3-233ENST00000618836 DIP2BQ9P265 1576 aa6.51□□□□□ -1.37
UBE2D3-233ENST00000618836 ADGRL1O94910 1474 aa6.51□□□□□ -1.37
UBE2D3-233ENST00000618836 EIF4G3O43432 1585 aaKnown RBP6.49□□□□□ -1.37
UBE2D3-233ENST00000618836 SCRIBQ14160 1630 aa6.48□□□□□ -1.37
UBE2D3-233ENST00000618836 SNAPC4Q5SXM2 1469 aa6.47□□□□□ -1.37
UBE2D3-233ENST00000618836 UBE2Q2Q8WVN8 375 aa6.46□□□□□ -1.38
UBE2D3-233ENST00000618836 PLCB2Q00722 1185 aa6.46□□□□□ -1.38
UBE2D3-233ENST00000618836 IFT140Q96RY7 1462 aa6.46□□□□□ -1.38
UBE2D3-233ENST00000618836 GLI2P10070 1586 aa6.46□□□□□ -1.38
UBE2D3-233ENST00000618836 ADAMTSL3P82987 1691 aa6.44□□□□□ -1.38
UBE2D3-233ENST00000618836 ABCC10Q5T3U5 1492 aa6.44□□□□□ -1.38
UBE2D3-233ENST00000618836 TARBP1Q13395 1621 aaKnown RBP6.43□□□□□ -1.38
UBE2D3-233ENST00000618836 TMEM132AQ24JP5 1023 aa6.43□□□□□ -1.38
UBE2D3-233ENST00000618836 SYNJ1O43426 1573 aa6.43□□□□□ -1.38
UBE2D3-233ENST00000618836 BAZ1BQ9UIG0 1483 aaKnown RBP6.43□□□□□ -1.38
UBE2D3-233ENST00000618836 MYCNP04198 464 aaPredicted RBP6.41□□□□□ -1.38
UBE2D3-233ENST00000618836 U3KPZ7 1027 aaPredicted RBP6.4□□□□□ -1.39
UBE2D3-233ENST00000618836 PDIA4P13667 645 aaKnown RBP6.39□□□□□ -1.39
UBE2D3-233ENST00000618836 ZCCHC6Q5VYS8 1495 aaKnown RBP6.38□□□□□ -1.39
UBE2D3-233ENST00000618836 CEP164Q9UPV0 1460 aa6.38□□□□□ -1.39
UBE2D3-233ENST00000618836 DCAF8L1A6NGE4 600 aa6.38□□□□□ -1.39
UBE2D3-233ENST00000618836 C14orf37Q86TY3 774 aa6.38□□□□□ -1.39
UBE2D3-233ENST00000618836 URB2Q14146 1524 aaKnown RBP6.38□□□□□ -1.39
UBE2D3-233ENST00000618836 PCF11O94913 1555 aaKnown RBP6.38□□□□□ -1.39
UBE2D3-233ENST00000618836 LOC105371045A0A1W2PR82 267 aa6.37□□□□□ -1.39
UBE2D3-233ENST00000618836 HRCP23327 699 aa6.37□□□□□ -1.39
UBE2D3-233ENST00000618836 DISP3Q9P2K9 1392 aa6.37□□□□□ -1.39
UBE2D3-233ENST00000618836 TRHP20396 242 aaPredicted RBP6.35□□□□□ -1.39
UBE2D3-233ENST00000618836 MKRN4PQ13434 485 aaPredicted RBP6.34□□□□□ -1.39
UBE2D3-233ENST00000618836 MED1Q15648 1581 aaPredicted RBP6.34□□□□□ -1.39
UBE2D3-233ENST00000618836 TRIM26Q12899 539 aaPredicted RBP6.34□□□□□ -1.4
UBE2D3-233ENST00000618836 CADPSQ9ULU8 1353 aa6.33□□□□□ -1.4
UBE2D3-233ENST00000618836 LTBP4Q8N2S1 1624 aa6.32□□□□□ -1.4
UBE2D3-233ENST00000618836 MAP3K4Q9Y6R4 1608 aa6.31□□□□□ -1.4
UBE2D3-233ENST00000618836 KIAA0586Q9BVV6 1533 aa6.3□□□□□ -1.4
UBE2D3-233ENST00000618836 GAPVD1Q14C86 1478 aa6.3□□□□□ -1.4
UBE2D3-233ENST00000618836 DCAF8L2P0C7V8 631 aa6.29□□□□□ -1.4
UBE2D3-233ENST00000618836 CYB5RLQ6IPT4 315 aa6.28□□□□□ -1.4
UBE2D3-233ENST00000618836 ZNF608Q9ULD9 1512 aaPredicted RBP6.28□□□□□ -1.4
UBE2D3-233ENST00000618836 HAP1P54257 671 aaPredicted RBP6.27□□□□□ -1.41
UBE2D3-233ENST00000618836 VSIG10Q8N0Z9 540 aa6.27□□□□□ -1.41
UBE2D3-233ENST00000618836 SAMD1Q6SPF0 538 aaPredicted RBP6.27□□□□□ -1.41
UBE2D3-233ENST00000618836 CHMP4AQ9BY43 222 aa6.27□□□□□ -1.41
UBE2D3-233ENST00000618836 ATXN8OSP0DMR3 200 aa6.26□□□□□ -1.41
UBE2D3-233ENST00000618836 CFTRP13569 1480 aa6.26□□□□□ -1.41
UBE2D3-233ENST00000618836 MAGI1Q96QZ7 1491 aaPredicted RBP6.26□□□□□ -1.41
UBE2D3-233ENST00000618836 PDE4CQ08493 712 aa6.25□□□□□ -1.41
UBE2D3-233ENST00000618836 ABCC8Q09428 1581 aa6.25□□□□□ -1.41
UBE2D3-233ENST00000618836 TAF7LQ5H9L4 462 aa6.24□□□□□ -1.41
UBE2D3-233ENST00000618836 SPINK5Q9NQ38 1064 aaPredicted RBP6.24□□□□□ -1.41
UBE2D3-233ENST00000618836 CDK11AQ9UQ88 783 aaPredicted RBP6.24□□□□□ -1.41
UBE2D3-233ENST00000618836 STRCQ7RTU9 1775 aa6.24□□□□□ -1.41
UBE2D3-233ENST00000618836 IFNLR1Q8IU57 520 aaPredicted RBP6.24□□□□□ -1.41
UBE2D3-233ENST00000618836 FANCD2Q9BXW9 1451 aa6.24□□□□□ -1.41
UBE2D3-233ENST00000618836 BRD2P25440 801 aaKnown RBP6.23□□□□□ -1.41
UBE2D3-233ENST00000618836 IFFO2Q5TF58 517 aa6.23□□□□□ -1.41
UBE2D3-233ENST00000618836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.23□□□□□ -1.41
UBE2D3-233ENST00000618836 BCORL1Q5H9F3 1711 aa6.22□□□□□ -1.41
UBE2D3-233ENST00000618836 NEFLP07196 543 aa6.22□□□□□ -1.41
UBE2D3-233ENST00000618836 PKNOX2Q96KN3 472 aa6.22□□□□□ -1.41
UBE2D3-233ENST00000618836 LRP5O75197 1615 aa6.21□□□□□ -1.41
UBE2D3-233ENST00000618836 UBTFP17480 764 aaKnown RBP6.19□□□□□ -1.42
UBE2D3-233ENST00000618836 PKD2Q13563 968 aa6.19□□□□□ -1.42
UBE2D3-233ENST00000618836 FBLN2P98095 1184 aa6.18□□□□□ -1.42
UBE2D3-233ENST00000618836 PREX1Q8TCU6 1659 aa6.18□□□□□ -1.42
UBE2D3-233ENST00000618836 DNMBPQ6XZF7 1577 aa6.18□□□□□ -1.42
UBE2D3-233ENST00000618836 ZNF219Q9P2Y4 722 aaPredicted RBP6.18□□□□□ -1.42
UBE2D3-233ENST00000618836 PBRM1Q86U86 1689 aa6.17□□□□□ -1.42
UBE2D3-233ENST00000618836 ADCY10Q96PN6 1610 aa6.17□□□□□ -1.42
UBE2D3-233ENST00000618836 CEP170Q5SW79 1584 aa6.17□□□□□ -1.42
UBE2D3-233ENST00000618836 CERKQ8TCT0 537 aa6.17□□□□□ -1.42
UBE2D3-233ENST00000618836 CDK11BP21127 795 aaKnown RBP6.16□□□□□ -1.42
UBE2D3-233ENST00000618836 FGD1P98174 961 aa6.16□□□□□ -1.42
UBE2D3-233ENST00000618836 KDM2AQ9Y2K7 1162 aa6.15□□□□□ -1.42
UBE2D3-233ENST00000618836 FER1L4A9Z1Z3 1794 aa6.15□□□□□ -1.43
UBE2D3-233ENST00000618836 NPM1P06748 294 aaKnown RBP eCLIP6.14□□□□□ -1.43
UBE2D3-233ENST00000618836 PCDH10Q9P2E7 1040 aa6.14□□□□□ -1.43
UBE2D3-233ENST00000618836 CENPBP07199 599 aaPredicted RBP6.13□□□□□ -1.43
UBE2D3-233ENST00000618836 PTPRTO14522 1441 aa6.13□□□□□ -1.43
UBE2D3-233ENST00000618836 SPDYE4A6NLX3 237 aa6.13□□□□□ -1.43
UBE2D3-233ENST00000618836 HSP90B1P14625 803 aaKnown RBP6.13□□□□□ -1.43
UBE2D3-233ENST00000618836 EPRSP07814 1512 aaKnown RBP6.13□□□□□ -1.43
UBE2D3-233ENST00000618836 PTPRMP28827 1452 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms