RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 IRX6P78412 446 aaPredicted RBP4.08□□□□□ -1.76
LPP-221ENST00000618621 CHMP7Q8WUX9 453 aaPredicted RBP4.08□□□□□ -1.76
LPP-221ENST00000618621 DDRGK1Q96HY6 314 aa4.08□□□□□ -1.76
LPP-221ENST00000618621 PPP4R2Q9NY27 417 aa4.08□□□□□ -1.76
LPP-221ENST00000618621 CHIC2Q9UKJ5 165 aa4.08□□□□□ -1.76
LPP-221ENST00000618621 CHMP4AQ9BY43 222 aa4.08□□□□□ -1.76
LPP-221ENST00000618621 FAM9BQ8IZU0 186 aa4.07□□□□□ -1.76
LPP-221ENST00000618621 KCNH8Q96L42 1107 aa4.07□□□□□ -1.76
LPP-221ENST00000618621 NBR1Q14596 966 aa4.07□□□□□ -1.76
LPP-221ENST00000618621 NPM1P06748 294 aaKnown RBP eCLIP4.07□□□□□ -1.76
LPP-221ENST00000618621 GLIPR1L2Q4G1C9 344 aa4.06□□□□□ -1.76
LPP-221ENST00000618621 HIRIP3Q9BW71 556 aaPredicted RBP4.06□□□□□ -1.76
LPP-221ENST00000618621 TNIKQ9UKE5 1360 aa4.06□□□□□ -1.76
LPP-221ENST00000618621 HSP90AA1P07900 732 aaKnown RBP4.05□□□□□ -1.76
LPP-221ENST00000618621 BECN1Q14457 450 aa4.05□□□□□ -1.76
LPP-221ENST00000618621 DHX37Q8IY37 1157 aaKnown RBP4.05□□□□□ -1.76
LPP-221ENST00000618621 DEKP35659 375 aaKnown RBP4.05□□□□□ -1.76
LPP-221ENST00000618621 PHF23Q9BUL5 403 aaPredicted RBP4.05□□□□□ -1.76
LPP-221ENST00000618621 CCER2I3L3R5 266 aa4.05□□□□□ -1.76
LPP-221ENST00000618621 MRS2Q9HD23 443 aa4.05□□□□□ -1.76
LPP-221ENST00000618621 EIF4G2P78344 907 aaKnown RBP eCLIP4.05□□□□□ -1.76
LPP-221ENST00000618621 CHGAP10645 457 aaKnown RBP4.05□□□□□ -1.76
LPP-221ENST00000618621 ERICH6BQ5W0A0 696 aa4.04□□□□□ -1.76
LPP-221ENST00000618621 CECR2Q9BXF3 1484 aa4.04□□□□□ -1.76
LPP-221ENST00000618621 CDK11BP21127 795 aaKnown RBP4.04□□□□□ -1.76
LPP-221ENST00000618621 SENP3Q9H4L4 574 aaPredicted RBP4.04□□□□□ -1.76
LPP-221ENST00000618621 PDIA4P13667 645 aaKnown RBP4.04□□□□□ -1.76
LPP-221ENST00000618621 PDE4CQ08493 712 aa4.04□□□□□ -1.76
LPP-221ENST00000618621 CLIP1P30622 1438 aa4.03□□□□□ -1.76
LPP-221ENST00000618621 NOP58Q9Y2X3 529 aaKnown RBP4.03□□□□□ -1.76
LPP-221ENST00000618621 PPM1GO15355 546 aaPredicted RBP4.03□□□□□ -1.76
LPP-221ENST00000618621 B4GALNT3Q6L9W6 998 aa4.03□□□□□ -1.76
LPP-221ENST00000618621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.03□□□□□ -1.765e-7■□□□□ 9.5
LPP-221ENST00000618621 WDR43Q15061 677 aaKnown RBP eCLIP4.03□□□□□ -1.76
LPP-221ENST00000618621 SIN3AQ96ST3 1273 aa4.02□□□□□ -1.77
LPP-221ENST00000618621 KANK4Q5T7N3 995 aaPredicted RBP4.02□□□□□ -1.77
LPP-221ENST00000618621 TSPY4P0CV99 314 aa4.02□□□□□ -1.77
LPP-221ENST00000618621 TSPY10P0CW01 314 aa4.02□□□□□ -1.77
LPP-221ENST00000618621 CDCA8Q53HL2 280 aa4.02□□□□□ -1.77
LPP-221ENST00000618621 SALL2Q9Y467 1007 aaPredicted RBP4.01□□□□□ -1.77
LPP-221ENST00000618621 TMEM132AQ24JP5 1023 aa4.01□□□□□ -1.77
LPP-221ENST00000618621 TONSLQ96HA7 1378 aa4.01□□□□□ -1.77
LPP-221ENST00000618621 CEP162Q5TB80 1403 aa4.01□□□□□ -1.77
LPP-221ENST00000618621 TNNT2P45379 298 aaPredicted RBP4.01□□□□□ -1.77
LPP-221ENST00000618621 KDM2AQ9Y2K7 1162 aa4□□□□□ -1.77
LPP-221ENST00000618621 DCAF8L1A6NGE4 600 aa4□□□□□ -1.77
LPP-221ENST00000618621 PPP1R15AO75807 674 aaPredicted RBP4□□□□□ -1.77
LPP-221ENST00000618621 CCDC180Q9P1Z9 1646 aa4□□□□□ -1.77
LPP-221ENST00000618621 ANO8Q9HCE9 1232 aaPredicted RBP4□□□□□ -1.77
LPP-221ENST00000618621 UBE2Q2Q8WVN8 375 aa4□□□□□ -1.77
LPP-221ENST00000618621 RRP7BPQ9NSQ0 103 aa3.99□□□□□ -1.77
LPP-221ENST00000618621 FANCIQ9NVI1 1328 aa3.99□□□□□ -1.77
LPP-221ENST00000618621 NCLP19338 710 aaKnown RBP3.99□□□□□ -1.77
LPP-221ENST00000618621 GOLGA6L22H0YM25 854 aa3.99□□□□□ -1.77
LPP-221ENST00000618621 EEA1Q15075 1411 aa3.98□□□□□ -1.77
LPP-221ENST00000618621 MYH16Q9H6N6 1097 aa3.98□□□□□ -1.77
LPP-221ENST00000618621 KNSTRNQ9Y448 316 aa3.98□□□□□ -1.77
LPP-221ENST00000618621 CHMP4BQ9H444 224 aaKnown RBP3.98□□□□□ -1.77
LPP-221ENST00000618621 LMOD2Q6P5Q4 547 aa3.98□□□□□ -1.77
LPP-221ENST00000618621 PLEKHD1A6NEE1 506 aa3.97□□□□□ -1.77
LPP-221ENST00000618621 STAG3Q9UJ98 1225 aa3.97□□□□□ -1.77
LPP-221ENST00000618621 LAS1LQ9Y4W2 734 aaKnown RBP3.97□□□□□ -1.77
LPP-221ENST00000618621 TRIM44Q96DX7 344 aaPredicted RBP3.97□□□□□ -1.77
LPP-221ENST00000618621 DNAJC5BQ9UF47 199 aa3.97□□□□□ -1.77
LPP-221ENST00000618621 TDRD9Q8NDG6 1382 aaKnown RBP3.97□□□□□ -1.77
LPP-221ENST00000618621 TRHP20396 242 aaPredicted RBP3.97□□□□□ -1.77
LPP-221ENST00000618621 ZBTB22O15209 634 aa3.96□□□□□ -1.78
LPP-221ENST00000618621 PNNQ9H307 717 aaKnown RBP3.96□□□□□ -1.78
LPP-221ENST00000618621 MS4A1P11836 297 aa3.96□□□□□ -1.78
LPP-221ENST00000618621 L1TD1Q5T7N2 865 aaKnown RBP3.96□□□□□ -1.78
LPP-221ENST00000618621 CCNB3Q8WWL7 1395 aa3.96□□□□□ -1.78
LPP-221ENST00000618621 CASC1Q6TDU7 716 aa3.96□□□□□ -1.78
LPP-221ENST00000618621 BCL11BQ9C0K0 894 aaPredicted RBP3.95□□□□□ -1.78
LPP-221ENST00000618621 ESF1Q9H501 851 aaKnown RBP3.95□□□□□ -1.78
LPP-221ENST00000618621 CARD11Q9BXL7 1154 aa3.95□□□□□ -1.78
LPP-221ENST00000618621 TCERG1O14776 1098 aaKnown RBP3.95□□□□□ -1.78
LPP-221ENST00000618621 SOGA1O94964 1423 aa3.95□□□□□ -1.78
LPP-221ENST00000618621 SAMD1Q6SPF0 538 aaPredicted RBP3.95□□□□□ -1.78
LPP-221ENST00000618621 NUDCQ9Y266 331 aa3.95□□□□□ -1.78
LPP-221ENST00000618621 SENP3-EIF4A1A0A087X0R7 540 aa3.95□□□□□ -1.78
LPP-221ENST00000618621 RGL3Q3MIN7 710 aa3.94□□□□□ -1.78
LPP-221ENST00000618621 CFAP53Q96M91 514 aa3.94□□□□□ -1.78
LPP-221ENST00000618621 WRNQ14191 1432 aaPredicted RBP eCLIP3.94□□□□□ -1.78
LPP-221ENST00000618621 RALBP1Q15311 655 aa3.94□□□□□ -1.78
LPP-221ENST00000618621 IPO9Q96P70 1041 aaKnown RBP3.94□□□□□ -1.78
LPP-221ENST00000618621 HSPA5P11021 654 aaKnown RBP3.94□□□□□ -1.78
LPP-221ENST00000618621 RB1CC1Q8TDY2 1594 aa3.94□□□□□ -1.78
LPP-221ENST00000618621 RCAN3Q9UKA8 241 aa3.94□□□□□ -1.78
LPP-221ENST00000618621 CFAP44Q96MT7 982 aa3.94□□□□□ -1.78
LPP-221ENST00000618621 FTSJ3Q8IY81 847 aaKnown RBP3.93□□□□□ -1.78
LPP-221ENST00000618621 CFDP1Q9UEE9 299 aaPredicted RBP3.93□□□□□ -1.78
LPP-221ENST00000618621 MLECQ14165 292 aa3.93□□□□□ -1.78
LPP-221ENST00000618621 BAZ1BQ9UIG0 1483 aaKnown RBP3.92□□□□□ -1.78
LPP-221ENST00000618621 PTMAP06454 111 aaKnown RBP3.92□□□□□ -1.78
LPP-221ENST00000618621 MTUS2Q5JR59 1369 aa3.92□□□□□ -1.78
LPP-221ENST00000618621 IPO8O15397 1037 aaKnown RBP3.92□□□□□ -1.78
LPP-221ENST00000618621 SETD5Q9C0A6 1442 aa3.92□□□□□ -1.78
LPP-221ENST00000618621 L3MBTL2Q969R5 705 aa3.92□□□□□ -1.78
LPP-221ENST00000618621 USP35Q9P2H5 1018 aa3.92□□□□□ -1.78
LPP-221ENST00000618621 IGSF3O75054 1194 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms