RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 CUL7Q14999 1698 aa37.98■■■■□ 3.67
SYNGR3-206ENST00000618464 RUSC2Q8N2Y8 1516 aa37.95■■■■□ 3.67
SYNGR3-206ENST00000618464 CARMIL1Q5VZK9 1371 aa37.84■■■■□ 3.65
SYNGR3-206ENST00000618464 KIAA0586Q9BVV6 1533 aa37.77■■■■□ 3.64
SYNGR3-206ENST00000618464 KIF13AQ9H1H9 1805 aa37.66■■■■□ 3.62
SYNGR3-206ENST00000618464 NPM1P06748 294 aaKnown RBP eCLIP37.59■■■■□ 3.61
SYNGR3-206ENST00000618464 ADCY10Q96PN6 1610 aa37.58■■■■□ 3.61
SYNGR3-206ENST00000618464 RAPGEF2Q9Y4G8 1499 aa37.55■■■■□ 3.6
SYNGR3-206ENST00000618464 MAPKBP1O60336 1514 aa37.51■■■■□ 3.59
SYNGR3-206ENST00000618464 IQGAP2Q13576 1575 aa37.51■■■■□ 3.59
SYNGR3-206ENST00000618464 FAM69CQ0P6D2 419 aa37.5■■■■□ 3.59
SYNGR3-206ENST00000618464 ABCC10Q5T3U5 1492 aa37.5■■■■□ 3.59
SYNGR3-206ENST00000618464 AEBP2Q6ZN18 517 aaPredicted RBP37.44■■■■□ 3.58
SYNGR3-206ENST00000618464 PTPRGP23470 1445 aa37.44■■■■□ 3.58
SYNGR3-206ENST00000618464 TTBK1Q5TCY1 1321 aaPredicted RBP37.42■■■■□ 3.58
SYNGR3-206ENST00000618464 DIP2BQ9P265 1576 aa37.4■■■■□ 3.58
SYNGR3-206ENST00000618464 CARMIL2Q6F5E8 1435 aa37.39■■■■□ 3.58
SYNGR3-206ENST00000618464 TNIKQ9UKE5 1360 aa37.36■■■■□ 3.57
SYNGR3-206ENST00000618464 DISP1Q96F81 1524 aa37.28■■■■□ 3.56
SYNGR3-206ENST00000618464 PRXQ9BXM0 1461 aa37.27■■■■□ 3.56
SYNGR3-206ENST00000618464 UGGT2Q9NYU1 1516 aa37.26■■■■□ 3.56
SYNGR3-206ENST00000618464 CTTNBP2Q8WZ74 1663 aa37.23■■■■□ 3.55
SYNGR3-206ENST00000618464 ABCC2Q92887 1545 aa37.21■■■■□ 3.55
SYNGR3-206ENST00000618464 KIAA0556O60303 1618 aa37.16■■■■□ 3.54
SYNGR3-206ENST00000618464 TSPOAP1O95153 1857 aa37.16■■■■□ 3.54
SYNGR3-206ENST00000618464 UACAQ9BZF9 1416 aa37.14■■■■□ 3.54
SYNGR3-206ENST00000618464 UHRF1BP1LA0JNW5 1464 aa37.13■■■■□ 3.54
SYNGR3-206ENST00000618464 CSRNP3Q8WYN3 585 aa37.13■■■■□ 3.53
SYNGR3-206ENST00000618464 ASXL2Q76L83 1435 aa37.1■■■■□ 3.53
SYNGR3-206ENST00000618464 KDM6BO15054 1643 aa37.07■■■■□ 3.52
SYNGR3-206ENST00000618464 PLB1Q6P1J6 1458 aa37.06■■■■□ 3.52
SYNGR3-206ENST00000618464 EEA1Q15075 1411 aa37.02■■■■□ 3.52
SYNGR3-206ENST00000618464 FAM9AQ8IZU1 332 aaPredicted RBP37.01■■■■□ 3.52
SYNGR3-206ENST00000618464 GOLGA3Q08378 1498 aa37.01■■■■□ 3.51
SYNGR3-206ENST00000618464 KDM5BQ9UGL1 1544 aa36.99■■■■□ 3.51
SYNGR3-206ENST00000618464 GLI2P10070 1586 aa36.97■■■■□ 3.51
SYNGR3-206ENST00000618464 PPRC1Q5VV67 1664 aaKnown RBP36.91■■■■□ 3.5
SYNGR3-206ENST00000618464 CHIC1Q5VXU3 224 aa36.91■■■■□ 3.5
SYNGR3-206ENST00000618464 ZCCHC11Q5TAX3 1644 aaKnown RBP36.91■■■■□ 3.5
SYNGR3-206ENST00000618464 EPRSP07814 1512 aaKnown RBP36.88■■■■□ 3.49
SYNGR3-206ENST00000618464 P3H3Q8IVL6 736 aa36.83■■■■□ 3.49
SYNGR3-206ENST00000618464 ABCA8O94911 1581 aa36.78■■■■□ 3.48
SYNGR3-206ENST00000618464 MAP3K4Q9Y6R4 1608 aa36.77■■■■□ 3.48
SYNGR3-206ENST00000618464 KDM4FA0A1W2PPD8 638 aa36.77■■■■□ 3.48
SYNGR3-206ENST00000618464 RANGAP1P46060 587 aaPredicted RBP36.74■■■■□ 3.47
SYNGR3-206ENST00000618464 KIF21BO75037 1637 aa36.73■■■■□ 3.47
SYNGR3-206ENST00000618464 WDR7Q9Y4E6 1490 aa36.72■■■■□ 3.47
SYNGR3-206ENST00000618464 SAMD9Q5K651 1589 aa36.71■■■■□ 3.47
SYNGR3-206ENST00000618464 COL17A1Q9UMD9 1497 aaPredicted RBP36.71■■■■□ 3.47
SYNGR3-206ENST00000618464 EHMT2Q96KQ7 1210 aa36.66■■■■□ 3.46
SYNGR3-206ENST00000618464 TEX14Q8IWB6 1497 aa36.64■■■■□ 3.46
SYNGR3-206ENST00000618464 ARID3CA6NKF2 412 aa36.61■■■■□ 3.45
SYNGR3-206ENST00000618464 KCNH8Q96L42 1107 aa36.6■■■■□ 3.45
SYNGR3-206ENST00000618464 FHOD3Q2V2M9 1422 aa36.54■■■■□ 3.44
SYNGR3-206ENST00000618464 CD109Q6YHK3 1445 aa36.52■■■■□ 3.44
SYNGR3-206ENST00000618464 RAPGEF6Q8TEU7 1601 aa36.5■■■■□ 3.43
SYNGR3-206ENST00000618464 UBTFP17480 764 aaKnown RBP36.5■■■■□ 3.43
SYNGR3-206ENST00000618464 ATP10BO94823 1461 aa36.49■■■■□ 3.43
SYNGR3-206ENST00000618464 CFAP43Q8NDM7 1665 aa36.48■■■■□ 3.43
SYNGR3-206ENST00000618464 MAGI3Q5TCQ9 1506 aa36.47■■■■□ 3.43
SYNGR3-206ENST00000618464 EFCAB5A4FU69 1503 aa36.44■■■■□ 3.42
SYNGR3-206ENST00000618464 ADGRL1O94910 1474 aa36.43■■■■□ 3.42
SYNGR3-206ENST00000618464 NUP153P49790 1475 aaKnown RBP36.37■■■■□ 3.41
SYNGR3-206ENST00000618464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.36■■■■□ 3.41
SYNGR3-206ENST00000618464 HNRNPUL2Q1KMD3 747 aaKnown RBP36.36■■■■□ 3.41
SYNGR3-206ENST00000618464 ABCA9Q8IUA7 1624 aa36.23■■■■□ 3.39
SYNGR3-206ENST00000618464 ARHGAP35Q9NRY4 1499 aa36.22■■■■□ 3.39
SYNGR3-206ENST00000618464 ARAP3Q8WWN8 1544 aa36.19■■■■□ 3.38
SYNGR3-206ENST00000618464 FMN1Q68DA7 1419 aa36.11■■■■□ 3.37
SYNGR3-206ENST00000618464 PLEKHD1A6NEE1 506 aa36.11■■■■□ 3.37
SYNGR3-206ENST00000618464 ATP1B4Q9UN42 357 aaPredicted RBP36.11■■■■□ 3.37
SYNGR3-206ENST00000618464 CDK13Q14004 1512 aaKnown RBP36.1■■■■□ 3.37
SYNGR3-206ENST00000618464 PHLDB1Q86UU1 1377 aa36.08■■■■□ 3.37
SYNGR3-206ENST00000618464 RAPGEF3O95398 923 aa36.04■■■■□ 3.36
SYNGR3-206ENST00000618464 HECW1Q76N89 1606 aa36.03■■■■□ 3.36
SYNGR3-206ENST00000618464 NEO1Q92859 1461 aa36.03■■■■□ 3.36
SYNGR3-206ENST00000618464 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.94■■■■□ 3.34
SYNGR3-206ENST00000618464 HECW2Q9P2P5 1572 aa35.92■■■■□ 3.34
SYNGR3-206ENST00000618464 FRMPD1Q5SYB0 1578 aa35.91■■■■□ 3.34
SYNGR3-206ENST00000618464 TTC37Q6PGP7 1564 aa35.91■■■■□ 3.34
SYNGR3-206ENST00000618464 PCF11O94913 1555 aaKnown RBP35.84■■■■□ 3.33
SYNGR3-206ENST00000618464 CLIP1P30622 1438 aa35.83■■■■□ 3.33
SYNGR3-206ENST00000618464 LRRIQ1Q96JM4 1722 aa35.83■■■■□ 3.33
SYNGR3-206ENST00000618464 AKNAQ7Z591 1439 aa35.83■■■■□ 3.33
SYNGR3-206ENST00000618464 CDK11AQ9UQ88 783 aaPredicted RBP35.82■■■■□ 3.32
SYNGR3-206ENST00000618464 FANCAO15360 1455 aa35.81■■■■□ 3.32
SYNGR3-206ENST00000618464 DENND4BO75064 1496 aaPredicted RBP35.8■■■■□ 3.32
SYNGR3-206ENST00000618464 CASKIN1Q8WXD9 1431 aa35.78■■■■□ 3.32
SYNGR3-206ENST00000618464 CFAP74Q9C0B2 1584 aa35.77■■■■□ 3.32
SYNGR3-206ENST00000618464 ADAMTSL3P82987 1691 aa35.77■■■■□ 3.32
SYNGR3-206ENST00000618464 RICTORQ6R327 1708 aa35.76■■■■□ 3.31
SYNGR3-206ENST00000618464 KIF14Q15058 1648 aa35.75■■■■□ 3.31
SYNGR3-206ENST00000618464 TROQ12816 1431 aaPredicted RBP35.74■■■■□ 3.31
SYNGR3-206ENST00000618464 ARID4BQ4LE39 1312 aaPredicted RBP35.73■■■■□ 3.31
SYNGR3-206ENST00000618464 PLCH2O75038 1416 aa35.7■■■■□ 3.31
SYNGR3-206ENST00000618464 PTPRMP28827 1452 aa35.7■■■■□ 3.31
SYNGR3-206ENST00000618464 BCORL1Q5H9F3 1711 aa35.69■■■■□ 3.3
SYNGR3-206ENST00000618464 CCDC18Q5T9S5 1454 aa35.69■■■■□ 3.3
SYNGR3-206ENST00000618464 ARHGEF40Q8TER5 1519 aa35.68■■■■□ 3.3
SYNGR3-206ENST00000618464 FYCO1Q9BQS8 1478 aa35.67■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms