RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 JPH4Q96JJ6 628 aa19.95■□□□□ 0.78
SHANK2-221ENST00000618363 CARMIL1Q5VZK9 1371 aa19.91■□□□□ 0.78
SHANK2-221ENST00000618363 PRG4Q92954 1404 aaPredicted RBP19.9■□□□□ 0.78
SHANK2-221ENST00000618363 SHROOM2Q13796 1616 aa19.9■□□□□ 0.78
SHANK2-221ENST00000618363 ERCC6L2Q5T890 1561 aa19.88■□□□□ 0.77
SHANK2-221ENST00000618363 RUSC2Q8N2Y8 1516 aa19.85■□□□□ 0.77
SHANK2-221ENST00000618363 KIAA0586Q9BVV6 1533 aa19.85■□□□□ 0.77
SHANK2-221ENST00000618363 NPM1P06748 294 aaKnown RBP eCLIP19.77■□□□□ 0.76
SHANK2-221ENST00000618363 SENP3Q9H4L4 574 aaPredicted RBP19.76■□□□□ 0.75
SHANK2-221ENST00000618363 RAPGEF2Q9Y4G8 1499 aa19.75■□□□□ 0.75
SHANK2-221ENST00000618363 CARMIL2Q6F5E8 1435 aa19.72■□□□□ 0.75
SHANK2-221ENST00000618363 TTBK1Q5TCY1 1321 aaPredicted RBP19.7■□□□□ 0.74
SHANK2-221ENST00000618363 IQGAP2Q13576 1575 aa19.69■□□□□ 0.74
SHANK2-221ENST00000618363 PTPRGP23470 1445 aa19.67■□□□□ 0.74
SHANK2-221ENST00000618363 TNIKQ9UKE5 1360 aa19.64■□□□□ 0.73
SHANK2-221ENST00000618363 CSRNP3Q8WYN3 585 aa19.58■□□□□ 0.72
SHANK2-221ENST00000618363 ADCY10Q96PN6 1610 aa19.56■□□□□ 0.72
SHANK2-221ENST00000618363 FAM9AQ8IZU1 332 aaPredicted RBP19.56■□□□□ 0.72
SHANK2-221ENST00000618363 UGGT2Q9NYU1 1516 aa19.55■□□□□ 0.72
SHANK2-221ENST00000618363 PRXQ9BXM0 1461 aa19.54■□□□□ 0.72
SHANK2-221ENST00000618363 FAM69CQ0P6D2 419 aa19.54■□□□□ 0.72
SHANK2-221ENST00000618363 EEA1Q15075 1411 aa19.53■□□□□ 0.72
SHANK2-221ENST00000618363 CTTNBP2Q8WZ74 1663 aa19.52■□□□□ 0.72
SHANK2-221ENST00000618363 DISP1Q96F81 1524 aa19.52■□□□□ 0.72
SHANK2-221ENST00000618363 MAPKBP1O60336 1514 aa19.51■□□□□ 0.71
SHANK2-221ENST00000618363 GOLGA3Q08378 1498 aa19.51■□□□□ 0.71
SHANK2-221ENST00000618363 UACAQ9BZF9 1416 aa19.49■□□□□ 0.71
SHANK2-221ENST00000618363 ABCC10Q5T3U5 1492 aa19.48■□□□□ 0.71
SHANK2-221ENST00000618363 KIAA0556O60303 1618 aa19.47■□□□□ 0.71
SHANK2-221ENST00000618363 ABCC2Q92887 1545 aa19.46■□□□□ 0.71
SHANK2-221ENST00000618363 KIF13AQ9H1H9 1805 aa19.46■□□□□ 0.71
SHANK2-221ENST00000618363 UHRF1BP1LA0JNW5 1464 aa19.45■□□□□ 0.7
SHANK2-221ENST00000618363 PLB1Q6P1J6 1458 aa19.41■□□□□ 0.7
SHANK2-221ENST00000618363 DIP2BQ9P265 1576 aa19.4■□□□□ 0.7
SHANK2-221ENST00000618363 ASXL2Q76L83 1435 aa19.38■□□□□ 0.69
SHANK2-221ENST00000618363 P3H3Q8IVL6 736 aa19.37■□□□□ 0.69
SHANK2-221ENST00000618363 RANGAP1P46060 587 aaPredicted RBP19.35■□□□□ 0.69
SHANK2-221ENST00000618363 KDM5BQ9UGL1 1544 aa19.35■□□□□ 0.69
SHANK2-221ENST00000618363 TSPOAP1O95153 1857 aa19.31■□□□□ 0.68
SHANK2-221ENST00000618363 ZCCHC11Q5TAX3 1644 aaKnown RBP19.3■□□□□ 0.68
SHANK2-221ENST00000618363 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
SHANK2-221ENST00000618363 KIF21BO75037 1637 aa19.27■□□□□ 0.68
SHANK2-221ENST00000618363 EHMT2Q96KQ7 1210 aa19.27■□□□□ 0.68
SHANK2-221ENST00000618363 ABCA8O94911 1581 aa19.27■□□□□ 0.67
SHANK2-221ENST00000618363 GLI2P10070 1586 aa19.27■□□□□ 0.67
SHANK2-221ENST00000618363 EPRSP07814 1512 aaKnown RBP19.25■□□□□ 0.67
SHANK2-221ENST00000618363 KCNH8Q96L42 1107 aa19.24■□□□□ 0.67
SHANK2-221ENST00000618363 WDR7Q9Y4E6 1490 aa19.23■□□□□ 0.67
SHANK2-221ENST00000618363 KDM6BO15054 1643 aa19.23■□□□□ 0.67
SHANK2-221ENST00000618363 ARID3CA6NKF2 412 aa19.23■□□□□ 0.67
SHANK2-221ENST00000618363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.23■□□□□ 0.67
SHANK2-221ENST00000618363 HNRNPUL2Q1KMD3 747 aaKnown RBP19.23■□□□□ 0.67
SHANK2-221ENST00000618363 SAMD9Q5K651 1589 aa19.23■□□□□ 0.67
SHANK2-221ENST00000618363 TEX14Q8IWB6 1497 aa19.19■□□□□ 0.66
SHANK2-221ENST00000618363 FHOD3Q2V2M9 1422 aa19.17■□□□□ 0.66
SHANK2-221ENST00000618363 EFCAB5A4FU69 1503 aa19.15■□□□□ 0.66
SHANK2-221ENST00000618363 RAPGEF6Q8TEU7 1601 aa19.15■□□□□ 0.66
SHANK2-221ENST00000618363 ATP10BO94823 1461 aa19.15■□□□□ 0.66
SHANK2-221ENST00000618363 MAP3K4Q9Y6R4 1608 aa19.14■□□□□ 0.66
SHANK2-221ENST00000618363 CD109Q6YHK3 1445 aa19.13■□□□□ 0.65
SHANK2-221ENST00000618363 PPRC1Q5VV67 1664 aaKnown RBP19.1■□□□□ 0.65
SHANK2-221ENST00000618363 PLEKHD1A6NEE1 506 aa19.09■□□□□ 0.65
SHANK2-221ENST00000618363 CFAP43Q8NDM7 1665 aa19.08■□□□□ 0.65
SHANK2-221ENST00000618363 ATP1B4Q9UN42 357 aaPredicted RBP19.08■□□□□ 0.64
SHANK2-221ENST00000618363 MAGI3Q5TCQ9 1506 aa19.05■□□□□ 0.64
SHANK2-221ENST00000618363 NUP153P49790 1475 aaKnown RBP19.05■□□□□ 0.64
SHANK2-221ENST00000618363 FMN1Q68DA7 1419 aa19.04■□□□□ 0.64
SHANK2-221ENST00000618363 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
SHANK2-221ENST00000618363 ARHGAP35Q9NRY4 1499 aa18.98■□□□□ 0.63
SHANK2-221ENST00000618363 COL17A1Q9UMD9 1497 aaPredicted RBP18.98■□□□□ 0.63
SHANK2-221ENST00000618363 CDK11AQ9UQ88 783 aaPredicted RBP18.98■□□□□ 0.63
SHANK2-221ENST00000618363 ABCA9Q8IUA7 1624 aa18.97■□□□□ 0.63
SHANK2-221ENST00000618363 PHLDB1Q86UU1 1377 aa18.96■□□□□ 0.63
SHANK2-221ENST00000618363 HECW1Q76N89 1606 aa18.93■□□□□ 0.62
SHANK2-221ENST00000618363 CDK13Q14004 1512 aaKnown RBP18.9■□□□□ 0.62
SHANK2-221ENST00000618363 NEO1Q92859 1461 aa18.9■□□□□ 0.62
SHANK2-221ENST00000618363 ARAP3Q8WWN8 1544 aa18.9■□□□□ 0.62
SHANK2-221ENST00000618363 KDM4FA0A1W2PPD8 638 aa18.89■□□□□ 0.61
SHANK2-221ENST00000618363 CLIP1P30622 1438 aa18.85■□□□□ 0.61
SHANK2-221ENST00000618363 RAPGEF3O95398 923 aa18.84■□□□□ 0.61
SHANK2-221ENST00000618363 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.84■□□□□ 0.61
SHANK2-221ENST00000618363 CFAP74Q9C0B2 1584 aa18.82■□□□□ 0.6
SHANK2-221ENST00000618363 FANCAO15360 1455 aa18.82■□□□□ 0.6
SHANK2-221ENST00000618363 ADGRL1O94910 1474 aa18.82■□□□□ 0.6
SHANK2-221ENST00000618363 AKNAQ7Z591 1439 aa18.81■□□□□ 0.6
SHANK2-221ENST00000618363 CASKIN1Q8WXD9 1431 aa18.81■□□□□ 0.6
SHANK2-221ENST00000618363 CCDC18Q5T9S5 1454 aa18.79■□□□□ 0.6
SHANK2-221ENST00000618363 TROQ12816 1431 aaPredicted RBP18.79■□□□□ 0.6
SHANK2-221ENST00000618363 TTC37Q6PGP7 1564 aa18.79■□□□□ 0.6
SHANK2-221ENST00000618363 DENND4BO75064 1496 aaPredicted RBP18.78■□□□□ 0.6
SHANK2-221ENST00000618363 EFCAB2Q5VUJ9 269 aa18.78■□□□□ 0.6
SHANK2-221ENST00000618363 PLCH2O75038 1416 aa18.77■□□□□ 0.6
SHANK2-221ENST00000618363 KIF14Q15058 1648 aa18.77■□□□□ 0.6
SHANK2-221ENST00000618363 PCF11O94913 1555 aaKnown RBP18.76■□□□□ 0.59
SHANK2-221ENST00000618363 FYCO1Q9BQS8 1478 aa18.75■□□□□ 0.59
SHANK2-221ENST00000618363 ARID4BQ4LE39 1312 aaPredicted RBP18.74■□□□□ 0.59
SHANK2-221ENST00000618363 MYO5CQ9NQX4 1742 aa18.72■□□□□ 0.59
SHANK2-221ENST00000618363 LRRIQ1Q96JM4 1722 aa18.7■□□□□ 0.58
SHANK2-221ENST00000618363 SCAPERQ9BY12 1400 aa18.7■□□□□ 0.58
SHANK2-221ENST00000618363 ARHGAP5Q13017 1502 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms