RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 ERICH3Q5RHP9 1530 aa19.58■□□□□ 0.73
CLTCL1-210ENST00000617926 FBLN2P98095 1184 aa19.58■□□□□ 0.72
CLTCL1-210ENST00000617926 CLIP1P30622 1438 aa19.55■□□□□ 0.72
CLTCL1-210ENST00000617926 VPS8Q8N3P4 1428 aa19.55■□□□□ 0.72
CLTCL1-210ENST00000617926 KIF27Q86VH2 1401 aa19.51■□□□□ 0.71
CLTCL1-210ENST00000617926 CHMP7Q8WUX9 453 aaPredicted RBP19.51■□□□□ 0.71
CLTCL1-210ENST00000617926 DIEXFQ68CQ4 756 aaKnown RBP19.5■□□□□ 0.71
CLTCL1-210ENST00000617926 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
CLTCL1-210ENST00000617926 FHAD1B1AJZ9 1412 aa19.49■□□□□ 0.71
CLTCL1-210ENST00000617926 TTBK1Q5TCY1 1321 aaPredicted RBP19.48■□□□□ 0.71
CLTCL1-210ENST00000617926 GRIN2AQ12879 1464 aa19.48■□□□□ 0.71
CLTCL1-210ENST00000617926 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
CLTCL1-210ENST00000617926 CLASP1Q7Z460 1538 aa19.48■□□□□ 0.71
CLTCL1-210ENST00000617926 IGF1RP08069 1367 aa19.45■□□□□ 0.7
CLTCL1-210ENST00000617926 CUL7Q14999 1698 aa19.44■□□□□ 0.7
CLTCL1-210ENST00000617926 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
CLTCL1-210ENST00000617926 RIMBP3CA6NJZ7 1639 aa19.42■□□□□ 0.7
CLTCL1-210ENST00000617926 RIMBP3BA6NNM3 1639 aa19.42■□□□□ 0.7
CLTCL1-210ENST00000617926 RIMBP3Q9UFD9 1639 aa19.42■□□□□ 0.7
CLTCL1-210ENST00000617926 ARHGEF11O15085 1522 aa19.4■□□□□ 0.7
CLTCL1-210ENST00000617926 NUP160Q12769 1436 aa19.39■□□□□ 0.69
CLTCL1-210ENST00000617926 NEUROD1Q13562 356 aa19.39■□□□□ 0.69
CLTCL1-210ENST00000617926 PRXQ9BXM0 1461 aa19.38■□□□□ 0.69
CLTCL1-210ENST00000617926 ZNF316A6NFI3 1004 aaPredicted RBP19.37■□□□□ 0.69
CLTCL1-210ENST00000617926 CENPBP07199 599 aaPredicted RBP19.36■□□□□ 0.69
CLTCL1-210ENST00000617926 CARMIL1Q5VZK9 1371 aa19.32■□□□□ 0.68
CLTCL1-210ENST00000617926 ARAP1Q96P48 1450 aa19.31■□□□□ 0.68
CLTCL1-210ENST00000617926 SHROOM2Q13796 1616 aa19.29■□□□□ 0.68
CLTCL1-210ENST00000617926 ERCC6L2Q5T890 1561 aa19.26■□□□□ 0.67
CLTCL1-210ENST00000617926 APLP2Q06481 763 aa19.24■□□□□ 0.67
CLTCL1-210ENST00000617926 HNRNPUL2Q1KMD3 747 aaKnown RBP19.24■□□□□ 0.67
CLTCL1-210ENST00000617926 CLSPNQ9HAW4 1339 aa19.21■□□□□ 0.67
CLTCL1-210ENST00000617926 KIAA0586Q9BVV6 1533 aa19.19■□□□□ 0.66
CLTCL1-210ENST00000617926 GTF3C3Q9Y5Q9 886 aa19.18■□□□□ 0.66
CLTCL1-210ENST00000617926 RRBP1Q9P2E9 1410 aaKnown RBP19.17■□□□□ 0.66
CLTCL1-210ENST00000617926 CYB5RLQ6IPT4 315 aa19.15■□□□□ 0.66
CLTCL1-210ENST00000617926 IQGAP2Q13576 1575 aa19.14■□□□□ 0.65
CLTCL1-210ENST00000617926 JPH4Q96JJ6 628 aa19.14■□□□□ 0.65
CLTCL1-210ENST00000617926 CTTNBP2Q8WZ74 1663 aa19.13■□□□□ 0.65
CLTCL1-210ENST00000617926 PRG4Q92954 1404 aaPredicted RBP19.13■□□□□ 0.65
CLTCL1-210ENST00000617926 DHX57Q6P158 1386 aaKnown RBP19.11■□□□□ 0.65
CLTCL1-210ENST00000617926 ARHGAP35Q9NRY4 1499 aa19.09■□□□□ 0.65
CLTCL1-210ENST00000617926 MAP3K1Q13233 1512 aa19.05■□□□□ 0.64
CLTCL1-210ENST00000617926 MIER1Q8N108 512 aa19.04■□□□□ 0.64
CLTCL1-210ENST00000617926 UGGT2Q9NYU1 1516 aa19.02■□□□□ 0.63
CLTCL1-210ENST00000617926 KANK4Q5T7N3 995 aaPredicted RBP19.01■□□□□ 0.63
CLTCL1-210ENST00000617926 DISP1Q96F81 1524 aa19.01■□□□□ 0.63
CLTCL1-210ENST00000617926 RANGAP1P46060 587 aaPredicted RBP19■□□□□ 0.63
CLTCL1-210ENST00000617926 TIAM1Q13009 1591 aa18.98■□□□□ 0.63
CLTCL1-210ENST00000617926 KIAA0556O60303 1618 aa18.97■□□□□ 0.63
CLTCL1-210ENST00000617926 CCNB3Q8WWL7 1395 aa18.97■□□□□ 0.63
CLTCL1-210ENST00000617926 CARMIL2Q6F5E8 1435 aa18.94■□□□□ 0.62
CLTCL1-210ENST00000617926 CFAP43Q8NDM7 1665 aa18.94■□□□□ 0.62
CLTCL1-210ENST00000617926 ADCY10Q96PN6 1610 aa18.91■□□□□ 0.62
CLTCL1-210ENST00000617926 YTHDC1Q96MU7 727 aaKnown RBP18.89■□□□□ 0.61
CLTCL1-210ENST00000617926 PTPRGP23470 1445 aa18.88■□□□□ 0.61
CLTCL1-210ENST00000617926 SAMD9Q5K651 1589 aa18.87■□□□□ 0.61
CLTCL1-210ENST00000617926 MAPKBP1O60336 1514 aa18.84■□□□□ 0.61
CLTCL1-210ENST00000617926 LRRC9Q6ZRR7 1453 aa18.84■□□□□ 0.61
CLTCL1-210ENST00000617926 PCF11O94913 1555 aaKnown RBP18.81■□□□□ 0.6
CLTCL1-210ENST00000617926 RAB3GAP2Q9H2M9 1393 aa18.78■□□□□ 0.6
CLTCL1-210ENST00000617926 ABCC2Q92887 1545 aa18.78■□□□□ 0.6
CLTCL1-210ENST00000617926 UACAQ9BZF9 1416 aa18.78■□□□□ 0.6
CLTCL1-210ENST00000617926 EFCAB5A4FU69 1503 aa18.77■□□□□ 0.6
CLTCL1-210ENST00000617926 P3H3Q8IVL6 736 aa18.77■□□□□ 0.6
CLTCL1-210ENST00000617926 UHRF1BP1LA0JNW5 1464 aa18.77■□□□□ 0.59
CLTCL1-210ENST00000617926 PLB1Q6P1J6 1458 aa18.77■□□□□ 0.59
CLTCL1-210ENST00000617926 ABCA8O94911 1581 aa18.75■□□□□ 0.59
CLTCL1-210ENST00000617926 SETD5Q9C0A6 1442 aa18.74■□□□□ 0.59
CLTCL1-210ENST00000617926 FYCO1Q9BQS8 1478 aa18.73■□□□□ 0.59
CLTCL1-210ENST00000617926 FHOD3Q2V2M9 1422 aa18.73■□□□□ 0.59
CLTCL1-210ENST00000617926 KIF13AQ9H1H9 1805 aa18.72■□□□□ 0.59
CLTCL1-210ENST00000617926 PHLDB1Q86UU1 1377 aa18.72■□□□□ 0.59
CLTCL1-210ENST00000617926 ZCCHC11Q5TAX3 1644 aaKnown RBP18.71■□□□□ 0.59
CLTCL1-210ENST00000617926 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
CLTCL1-210ENST00000617926 KDM5BQ9UGL1 1544 aa18.7■□□□□ 0.58
CLTCL1-210ENST00000617926 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.69■□□□□ 0.58
CLTCL1-210ENST00000617926 NPM1P06748 294 aaKnown RBP eCLIP18.67■□□□□ 0.58
CLTCL1-210ENST00000617926 MYT1Q01538 1121 aa18.67■□□□□ 0.58
CLTCL1-210ENST00000617926 RAPGEF6Q8TEU7 1601 aa18.66■□□□□ 0.58
CLTCL1-210ENST00000617926 CASKIN1Q8WXD9 1431 aa18.66■□□□□ 0.58
CLTCL1-210ENST00000617926 DIP2BQ9P265 1576 aa18.66■□□□□ 0.58
CLTCL1-210ENST00000617926 ABCC10Q5T3U5 1492 aa18.63■□□□□ 0.57
CLTCL1-210ENST00000617926 ASXL2Q76L83 1435 aa18.63■□□□□ 0.57
CLTCL1-210ENST00000617926 ITGAEP38570 1179 aa18.6■□□□□ 0.57
CLTCL1-210ENST00000617926 NUP153P49790 1475 aaKnown RBP18.59■□□□□ 0.57
CLTCL1-210ENST00000617926 TIMELESSQ9UNS1 1208 aa18.58■□□□□ 0.57
CLTCL1-210ENST00000617926 ARID3CA6NKF2 412 aa18.57■□□□□ 0.56
CLTCL1-210ENST00000617926 ATP10BO94823 1461 aa18.57■□□□□ 0.56
CLTCL1-210ENST00000617926 FMN1Q68DA7 1419 aa18.55■□□□□ 0.56
CLTCL1-210ENST00000617926 FAM69CQ0P6D2 419 aa18.54■□□□□ 0.56
CLTCL1-210ENST00000617926 LRRIQ1Q96JM4 1722 aa18.54■□□□□ 0.56
CLTCL1-210ENST00000617926 WDR7Q9Y4E6 1490 aa18.54■□□□□ 0.56
CLTCL1-210ENST00000617926 TSPOAP1O95153 1857 aa18.53■□□□□ 0.56
CLTCL1-210ENST00000617926 SUPT16HQ9Y5B9 1047 aaKnown RBP18.53■□□□□ 0.56
CLTCL1-210ENST00000617926 EPRSP07814 1512 aaKnown RBP18.53■□□□□ 0.56
CLTCL1-210ENST00000617926 FGD6Q6ZV73 1430 aa18.52■□□□□ 0.56
CLTCL1-210ENST00000617926 GLI2P10070 1586 aa18.51■□□□□ 0.55
CLTCL1-210ENST00000617926 FAM50AQ14320 339 aaKnown RBP18.5■□□□□ 0.55
CLTCL1-210ENST00000617926 HECW1Q76N89 1606 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms