RNA–Protein interactions for RNA: ENST00000617875.4

RECQL4-209, Transcript of RecQ like helicase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RECQL4, Length 3,809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-209ENST00000617875 SMARCA4P51532 1647 aa22.18■■□□□ 1.14
RECQL4-209ENST00000617875 SMARCA2P51531 1590 aa22.18■■□□□ 1.14
RECQL4-209ENST00000617875 DHX57Q6P158 1386 aaKnown RBP22.16■■□□□ 1.14
RECQL4-209ENST00000617875 RAB3GAP2Q9H2M9 1393 aa22.15■■□□□ 1.14
RECQL4-209ENST00000617875 CUX2O14529 1486 aa22.13■■□□□ 1.13
RECQL4-209ENST00000617875 KDM2AQ9Y2K7 1162 aa22.11■■□□□ 1.13
RECQL4-209ENST00000617875 MRS2Q9HD23 443 aa22.09■■□□□ 1.13
RECQL4-209ENST00000617875 NBR1Q14596 966 aa22.09■■□□□ 1.13
RECQL4-209ENST00000617875 CLSPNQ9HAW4 1339 aa22.08■■□□□ 1.13
RECQL4-209ENST00000617875 CARMIL1Q5VZK9 1371 aa22.06■■□□□ 1.12
RECQL4-209ENST00000617875 NPM2Q86SE8 214 aaKnown RBP22.04■■□□□ 1.12
RECQL4-209ENST00000617875 ATAD2BQ9ULI0 1458 aa22.03■■□□□ 1.12
RECQL4-209ENST00000617875 BCL11AQ9H165 835 aa22.03■■□□□ 1.12
RECQL4-209ENST00000617875 RBM19Q9Y4C8 960 aaKnown RBP22.03■■□□□ 1.12
RECQL4-209ENST00000617875 SLC4A1APQ9BWU0 796 aaKnown RBP22.02■■□□□ 1.12
RECQL4-209ENST00000617875 RTL5Q5HYW3 569 aaPredicted RBP21.94■■□□□ 1.1
RECQL4-209ENST00000617875 SYNJ1O43426 1573 aa21.94■■□□□ 1.1
RECQL4-209ENST00000617875 EIF4G2P78344 907 aaKnown RBP eCLIP21.93■■□□□ 1.1
RECQL4-209ENST00000617875 B4GALNT3Q6L9W6 998 aa21.93■■□□□ 1.1
RECQL4-209ENST00000617875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.93■■□□□ 1.11e-6■■■□□ 15.4
RECQL4-209ENST00000617875 SETD5Q9C0A6 1442 aa21.92■■□□□ 1.1
RECQL4-209ENST00000617875 TDRD9Q8NDG6 1382 aaKnown RBP21.92■■□□□ 1.1
RECQL4-209ENST00000617875 FHOD3Q2V2M9 1422 aa21.91■■□□□ 1.1
RECQL4-209ENST00000617875 SENP3Q9H4L4 574 aaPredicted RBP21.91■■□□□ 1.1
RECQL4-209ENST00000617875 KIF21BO75037 1637 aa21.88■■□□□ 1.09
RECQL4-209ENST00000617875 PPP1R15AO75807 674 aaPredicted RBP21.88■■□□□ 1.09
RECQL4-209ENST00000617875 RGL3Q3MIN7 710 aa21.86■■□□□ 1.09
RECQL4-209ENST00000617875 HSPA5P11021 654 aaKnown RBP21.85■■□□□ 1.09
RECQL4-209ENST00000617875 ARAP1Q96P48 1450 aa21.84■■□□□ 1.09
RECQL4-209ENST00000617875 TMC1Q8TDI8 760 aa21.82■■□□□ 1.08
RECQL4-209ENST00000617875 CCDC136Q96JN2 1154 aa21.79■■□□□ 1.08
RECQL4-209ENST00000617875 PHLDB1Q86UU1 1377 aa21.77■■□□□ 1.07
RECQL4-209ENST00000617875 DAXXQ9UER7 740 aaPredicted RBP21.74■■□□□ 1.07
RECQL4-209ENST00000617875 IGF1RP08069 1367 aa21.73■■□□□ 1.07
RECQL4-209ENST00000617875 L3MBTL2Q969R5 705 aa21.7■■□□□ 1.06
RECQL4-209ENST00000617875 ANP32AP39687 249 aaKnown RBP21.69■■□□□ 1.06
RECQL4-209ENST00000617875 EIF4G1Q04637 1599 aaKnown RBP21.69■■□□□ 1.06
RECQL4-209ENST00000617875 CHMP7Q8WUX9 453 aaPredicted RBP21.67■■□□□ 1.06
RECQL4-209ENST00000617875 CFDP1Q9UEE9 299 aaPredicted RBP21.66■■□□□ 1.06
RECQL4-209ENST00000617875 ARHGAP35Q9NRY4 1499 aa21.65■■□□□ 1.06
RECQL4-209ENST00000617875 FHAD1B1AJZ9 1412 aa21.65■■□□□ 1.06
RECQL4-209ENST00000617875 RTN4Q9NQC3 1192 aaKnown RBP21.64■■□□□ 1.05
RECQL4-209ENST00000617875 RAD54L2Q9Y4B4 1467 aa21.63■■□□□ 1.05
RECQL4-209ENST00000617875 MPHOSPH9Q99550 1183 aa21.63■■□□□ 1.05
RECQL4-209ENST00000617875 CADPSQ9ULU8 1353 aa21.59■■□□□ 1.05
RECQL4-209ENST00000617875 CCDC184Q52MB2 194 aa21.58■■□□□ 1.05
RECQL4-209ENST00000617875 CARD11Q9BXL7 1154 aa21.58■■□□□ 1.05
RECQL4-209ENST00000617875 TSPY4P0CV99 314 aa21.58■■□□□ 1.05
RECQL4-209ENST00000617875 TSPY10P0CW01 314 aa21.58■■□□□ 1.05
RECQL4-209ENST00000617875 CCER2I3L3R5 266 aa21.57■■□□□ 1.04
RECQL4-209ENST00000617875 DNAJC5BQ9UF47 199 aa21.56■■□□□ 1.04
RECQL4-209ENST00000617875 ZBTB47Q9UFB7 747 aaPredicted RBP21.56■■□□□ 1.04
RECQL4-209ENST00000617875 ZNF644Q9H582 1327 aaPredicted RBP21.56■■□□□ 1.04
RECQL4-209ENST00000617875 CHGAP10645 457 aaKnown RBP21.55■■□□□ 1.04
RECQL4-209ENST00000617875 DCAF11Q8TEB1 546 aa21.53■■□□□ 1.04
RECQL4-209ENST00000617875 CC2D1BQ5T0F9 858 aaKnown RBP21.52■■□□□ 1.04
RECQL4-209ENST00000617875 PPP4R2Q9NY27 417 aa21.52■■□□□ 1.04
RECQL4-209ENST00000617875 DEKP35659 375 aaKnown RBP21.52■■□□□ 1.04
RECQL4-209ENST00000617875 PKD2Q13563 968 aa21.51■■□□□ 1.03
RECQL4-209ENST00000617875 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
RECQL4-209ENST00000617875 LAS1LQ9Y4W2 734 aaKnown RBP21.5■■□□□ 1.03
RECQL4-209ENST00000617875 PRXQ9BXM0 1461 aa21.5■■□□□ 1.03
RECQL4-209ENST00000617875 CUX1P39880 1505 aa21.46■■□□□ 1.03
RECQL4-209ENST00000617875 EIF5BO60841 1220 aaKnown RBP21.45■■□□□ 1.02
RECQL4-209ENST00000617875 TIMELESSQ9UNS1 1208 aa21.45■■□□□ 1.02
RECQL4-209ENST00000617875 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
RECQL4-209ENST00000617875 PLEKHD1A6NEE1 506 aa21.44■■□□□ 1.02
RECQL4-209ENST00000617875 RRBP1Q9P2E9 1410 aaKnown RBP21.43■■□□□ 1.02
RECQL4-209ENST00000617875 BICRAQ9NZM4 1560 aa21.43■■□□□ 1.02
RECQL4-209ENST00000617875 ARXQ96QS3 562 aa21.42■■□□□ 1.02
RECQL4-209ENST00000617875 LRRC9Q6ZRR7 1453 aa21.42■■□□□ 1.02
RECQL4-209ENST00000617875 CANXP27824 592 aaKnown RBP21.42■■□□□ 1.02
RECQL4-209ENST00000617875 NOP58Q9Y2X3 529 aaKnown RBP21.42■■□□□ 1.02
RECQL4-209ENST00000617875 WASHC2AQ641Q2 1341 aa21.41■■□□□ 1.02
RECQL4-209ENST00000617875 PRKRIP1Q9H875 184 aaPredicted RBP21.38■■□□□ 1.01
RECQL4-209ENST00000617875 CCDC18Q5T9S5 1454 aa21.38■■□□□ 1.01
RECQL4-209ENST00000617875 NESP48681 1621 aa21.38■■□□□ 1.01
RECQL4-209ENST00000617875 FANCD2Q9BXW9 1451 aa21.38■■□□□ 1.01
RECQL4-209ENST00000617875 MSH5O43196 834 aa21.37■■□□□ 1.01
RECQL4-209ENST00000617875 NEUROD2Q15784 382 aa21.36■■□□□ 1.01
RECQL4-209ENST00000617875 TNNT2P45379 298 aaPredicted RBP21.35■■□□□ 1.01
RECQL4-209ENST00000617875 FMN1Q68DA7 1419 aa21.34■■□□□ 1.01
RECQL4-209ENST00000617875 C11orf95C9JLR9 678 aaPredicted RBP21.33■■□□□ 1.01
RECQL4-209ENST00000617875 HNRNPMP52272 730 aaKnown RBP eCLIP21.33■■□□□ 1.01
RECQL4-209ENST00000617875 TOP2BQ02880 1626 aa21.32■■□□□ 1
RECQL4-209ENST00000617875 NBPF8Q3BBV2 869 aa21.3■■□□□ 1
RECQL4-209ENST00000617875 FGD6Q6ZV73 1430 aa21.3■■□□□ 1
RECQL4-209ENST00000617875 ST20-MTHFSA0A0A6YYL1 179 aa21.29■■□□□ 1
RECQL4-209ENST00000617875 PLIN1O60240 522 aa21.28■■□□□ 1
RECQL4-209ENST00000617875 RGS3P49796 1198 aa21.28■■□□□ 1
RECQL4-209ENST00000617875 WDR43Q15061 677 aaKnown RBP eCLIP21.27■■□□□ 1
RECQL4-209ENST00000617875 NCAPD3P42695 1498 aa21.26■□□□□ 0.99
RECQL4-209ENST00000617875 PDS5BQ9NTI5 1447 aa21.26■□□□□ 0.99
RECQL4-209ENST00000617875 NUP155O75694 1391 aa21.25■□□□□ 0.99
RECQL4-209ENST00000617875 UNC13AQ9UPW8 1703 aa21.25■□□□□ 0.99
RECQL4-209ENST00000617875 NEFMP07197 916 aa21.25■□□□□ 0.99
RECQL4-209ENST00000617875 CFTRP13569 1480 aa21.24■□□□□ 0.99
RECQL4-209ENST00000617875 KIF7Q2M1P5 1343 aa21.21■□□□□ 0.99
RECQL4-209ENST00000617875 ERICH3Q5RHP9 1530 aa21.21■□□□□ 0.99
RECQL4-209ENST00000617875 AQRO60306 1485 aaKnown RBP eCLIP21.18■□□□□ 0.984e-7■■■■□ 25.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms