RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 CLIP1P30622 1438 aa25.96■■□□□ 1.75
SNAP47-213ENST00000617596 CTTNBP2Q8WZ74 1663 aa25.93■■□□□ 1.74
SNAP47-213ENST00000617596 CHD1O14646 1710 aa25.93■■□□□ 1.74
SNAP47-213ENST00000617596 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
SNAP47-213ENST00000617596 NUP160Q12769 1436 aa25.89■■□□□ 1.73
SNAP47-213ENST00000617596 P3H3Q8IVL6 736 aa25.86■■□□□ 1.73
SNAP47-213ENST00000617596 KIAA0586Q9BVV6 1533 aa25.85■■□□□ 1.73
SNAP47-213ENST00000617596 IQGAP2Q13576 1575 aa25.84■■□□□ 1.73
SNAP47-213ENST00000617596 ARHGAP35Q9NRY4 1499 aa25.83■■□□□ 1.73
SNAP47-213ENST00000617596 ARAP1Q96P48 1450 aa25.78■■□□□ 1.72
SNAP47-213ENST00000617596 JPH4Q96JJ6 628 aa25.74■■□□□ 1.71
SNAP47-213ENST00000617596 FHOD3Q2V2M9 1422 aa25.73■■□□□ 1.71
SNAP47-213ENST00000617596 UGGT2Q9NYU1 1516 aa25.69■■□□□ 1.7
SNAP47-213ENST00000617596 EFCAB5A4FU69 1503 aa25.68■■□□□ 1.7
SNAP47-213ENST00000617596 SAMD9Q5K651 1589 aa25.67■■□□□ 1.7
SNAP47-213ENST00000617596 TTBK1Q5TCY1 1321 aaPredicted RBP25.66■■□□□ 1.7
SNAP47-213ENST00000617596 OSCARQ8IYS5 282 aa25.66■■□□□ 1.7
SNAP47-213ENST00000617596 DISP1Q96F81 1524 aa25.65■■□□□ 1.7
SNAP47-213ENST00000617596 VPS8Q8N3P4 1428 aa25.64■■□□□ 1.69
SNAP47-213ENST00000617596 CLASP1Q7Z460 1538 aa25.63■■□□□ 1.69
SNAP47-213ENST00000617596 PRG4Q92954 1404 aaPredicted RBP25.6■■□□□ 1.69
SNAP47-213ENST00000617596 KIAA0556O60303 1618 aa25.59■■□□□ 1.69
SNAP47-213ENST00000617596 PPARGC1BQ86YN6 1023 aaKnown RBP25.55■■□□□ 1.68
SNAP47-213ENST00000617596 CARMIL2Q6F5E8 1435 aa25.54■■□□□ 1.68
SNAP47-213ENST00000617596 SHROOM2Q13796 1616 aa25.53■■□□□ 1.68
SNAP47-213ENST00000617596 ERCC6L2Q5T890 1561 aa25.52■■□□□ 1.68
SNAP47-213ENST00000617596 ATP1B4Q9UN42 357 aaPredicted RBP25.52■■□□□ 1.68
SNAP47-213ENST00000617596 FMN1Q68DA7 1419 aa25.49■■□□□ 1.67
SNAP47-213ENST00000617596 PCF11O94913 1555 aaKnown RBP25.45■■□□□ 1.67
SNAP47-213ENST00000617596 APLP2Q06481 763 aa25.4■■□□□ 1.66
SNAP47-213ENST00000617596 CASKIN1Q8WXD9 1431 aa25.4■■□□□ 1.66
SNAP47-213ENST00000617596 ARID3CA6NKF2 412 aa25.39■■□□□ 1.66
SNAP47-213ENST00000617596 PTPRGP23470 1445 aa25.39■■□□□ 1.65
SNAP47-213ENST00000617596 DNAJC5Q9H3Z4 198 aa25.38■■□□□ 1.65
SNAP47-213ENST00000617596 PLB1Q6P1J6 1458 aa25.37■■□□□ 1.65
SNAP47-213ENST00000617596 FYCO1Q9BQS8 1478 aa25.36■■□□□ 1.65
SNAP47-213ENST00000617596 KANK4Q5T7N3 995 aaPredicted RBP25.32■■□□□ 1.64
SNAP47-213ENST00000617596 RAPGEF6Q8TEU7 1601 aa25.28■■□□□ 1.64
SNAP47-213ENST00000617596 NUP153P49790 1475 aaKnown RBP25.26■■□□□ 1.63
SNAP47-213ENST00000617596 LRRIQ1Q96JM4 1722 aa25.26■■□□□ 1.63
SNAP47-213ENST00000617596 HECW1Q76N89 1606 aa25.25■■□□□ 1.63
SNAP47-213ENST00000617596 ABCA8O94911 1581 aa25.24■■□□□ 1.63
SNAP47-213ENST00000617596 TIAM1Q13009 1591 aa25.24■■□□□ 1.63
SNAP47-213ENST00000617596 CDK13Q14004 1512 aaKnown RBP25.23■■□□□ 1.63
SNAP47-213ENST00000617596 EPRSP07814 1512 aaKnown RBP25.22■■□□□ 1.63
SNAP47-213ENST00000617596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.22■■□□□ 1.63
SNAP47-213ENST00000617596 HNRNPUL2Q1KMD3 747 aaKnown RBP25.22■■□□□ 1.63
SNAP47-213ENST00000617596 ARHGEF11O15085 1522 aa25.21■■□□□ 1.63
SNAP47-213ENST00000617596 UACAQ9BZF9 1416 aa25.21■■□□□ 1.63
SNAP47-213ENST00000617596 CFAP43Q8NDM7 1665 aa25.17■■□□□ 1.62
SNAP47-213ENST00000617596 MAP3K1Q13233 1512 aa25.17■■□□□ 1.62
SNAP47-213ENST00000617596 CCDC18Q5T9S5 1454 aa25.16■■□□□ 1.62
SNAP47-213ENST00000617596 LRRC9Q6ZRR7 1453 aa25.15■■□□□ 1.62
SNAP47-213ENST00000617596 ABCC2Q92887 1545 aa25.11■■□□□ 1.61
SNAP47-213ENST00000617596 ATP10BO94823 1461 aa25.11■■□□□ 1.61
SNAP47-213ENST00000617596 MAGI3Q5TCQ9 1506 aa25.11■■□□□ 1.61
SNAP47-213ENST00000617596 MTUS2Q5JR59 1369 aa25.11■■□□□ 1.61
SNAP47-213ENST00000617596 RIMBP3CA6NJZ7 1639 aa25.11■■□□□ 1.61
SNAP47-213ENST00000617596 RIMBP3BA6NNM3 1639 aa25.11■■□□□ 1.61
SNAP47-213ENST00000617596 RIMBP3Q9UFD9 1639 aa25.11■■□□□ 1.61
SNAP47-213ENST00000617596 CYB5RLQ6IPT4 315 aa25.08■■□□□ 1.61
SNAP47-213ENST00000617596 ADCY10Q96PN6 1610 aa25.05■■□□□ 1.6
SNAP47-213ENST00000617596 UHRF1BP1LA0JNW5 1464 aa25.04■■□□□ 1.6
SNAP47-213ENST00000617596 HRCP23327 699 aa25.02■■□□□ 1.6
SNAP47-213ENST00000617596 TRIM26Q12899 539 aaPredicted RBP25.01■■□□□ 1.59
SNAP47-213ENST00000617596 CDK11AQ9UQ88 783 aaPredicted RBP25.01■■□□□ 1.59
SNAP47-213ENST00000617596 PCGF6Q9BYE7 350 aa25■■□□□ 1.59
SNAP47-213ENST00000617596 EHBP1L1Q8N3D4 1523 aa24.99■■□□□ 1.59
SNAP47-213ENST00000617596 PLEKHD1A6NEE1 506 aa24.98■■□□□ 1.59
SNAP47-213ENST00000617596 KDM5BQ9UGL1 1544 aa24.97■■□□□ 1.59
SNAP47-213ENST00000617596 PHLDB1Q86UU1 1377 aa24.96■■□□□ 1.59
SNAP47-213ENST00000617596 ZCCHC11Q5TAX3 1644 aaKnown RBP24.96■■□□□ 1.59
SNAP47-213ENST00000617596 TROQ12816 1431 aaPredicted RBP24.94■■□□□ 1.58
SNAP47-213ENST00000617596 NCOA2Q15596 1464 aa24.94■■□□□ 1.58
SNAP47-213ENST00000617596 SUPT6HQ7KZ85 1726 aaKnown RBP24.89■■□□□ 1.58
SNAP47-213ENST00000617596 NPM1P06748 294 aaKnown RBP eCLIP24.88■■□□□ 1.57
SNAP47-213ENST00000617596 KCNH8Q96L42 1107 aa24.88■■□□□ 1.57
SNAP47-213ENST00000617596 KIF14Q15058 1648 aa24.87■■□□□ 1.57
SNAP47-213ENST00000617596 ASXL2Q76L83 1435 aa24.81■■□□□ 1.56
SNAP47-213ENST00000617596 MYOM3Q5VTT5 1437 aa24.79■■□□□ 1.56
SNAP47-213ENST00000617596 RRBP1Q9P2E9 1410 aaKnown RBP24.79■■□□□ 1.56
SNAP47-213ENST00000617596 CCNB3Q8WWL7 1395 aa24.78■■□□□ 1.56
SNAP47-213ENST00000617596 WDR7Q9Y4E6 1490 aa24.77■■□□□ 1.56
SNAP47-213ENST00000617596 FAM50AQ14320 339 aaKnown RBP24.76■■□□□ 1.55
SNAP47-213ENST00000617596 ABCC10Q5T3U5 1492 aa24.76■■□□□ 1.55
SNAP47-213ENST00000617596 FGD6Q6ZV73 1430 aa24.75■■□□□ 1.55
SNAP47-213ENST00000617596 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.72■■□□□ 1.55
SNAP47-213ENST00000617596 GPATCH8Q9UKJ3 1502 aaKnown RBP24.72■■□□□ 1.55
SNAP47-213ENST00000617596 ITGAEP38570 1179 aa24.72■■□□□ 1.55
SNAP47-213ENST00000617596 TTC37Q6PGP7 1564 aa24.7■■□□□ 1.54
SNAP47-213ENST00000617596 ZNF644Q9H582 1327 aaPredicted RBP24.69■■□□□ 1.54
SNAP47-213ENST00000617596 CFDP1Q9UEE9 299 aaPredicted RBP24.69■■□□□ 1.54
SNAP47-213ENST00000617596 ZNF777Q9ULD5 760 aaPredicted RBP24.68■■□□□ 1.54
SNAP47-213ENST00000617596 MIA2Q96PC5 1412 aa24.64■■□□□ 1.54
SNAP47-213ENST00000617596 PTPN23Q9H3S7 1636 aa24.64■■□□□ 1.53
SNAP47-213ENST00000617596 MAPKBP1O60336 1514 aa24.64■■□□□ 1.53
SNAP47-213ENST00000617596 CDC42BPAQ5VT25 1732 aa24.63■■□□□ 1.53
SNAP47-213ENST00000617596 ITSN2Q9NZM3 1697 aa24.6■■□□□ 1.53
SNAP47-213ENST00000617596 TCOF1Q13428 1488 aaKnown RBP24.58■■□□□ 1.53
SNAP47-213ENST00000617596 CDC42BPBQ9Y5S2 1711 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms