RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 FHAD1B1AJZ9 1412 aa23.84■■□□□ 1.41
NR1H3-235ENST00000616973 TIAM1Q13009 1591 aa23.83■■□□□ 1.4
NR1H3-235ENST00000616973 KANK4Q5T7N3 995 aaPredicted RBP23.82■■□□□ 1.4
NR1H3-235ENST00000616973 WDR62O43379 1518 aa23.8■■□□□ 1.4
NR1H3-235ENST00000616973 CFAP43Q8NDM7 1665 aa23.79■■□□□ 1.4
NR1H3-235ENST00000616973 RRBP1Q9P2E9 1410 aaKnown RBP23.78■■□□□ 1.4
NR1H3-235ENST00000616973 PCF11O94913 1555 aaKnown RBP23.76■■□□□ 1.39
NR1H3-235ENST00000616973 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.399e-8■■■■□ 21.2
NR1H3-235ENST00000616973 SAMD9Q5K651 1589 aa23.74■■□□□ 1.39
NR1H3-235ENST00000616973 HNRNPUL2Q1KMD3 747 aaKnown RBP23.72■■□□□ 1.39
NR1H3-235ENST00000616973 IFT140Q96RY7 1462 aa23.72■■□□□ 1.39
NR1H3-235ENST00000616973 FYCO1Q9BQS8 1478 aa23.71■■□□□ 1.39
NR1H3-235ENST00000616973 ADAMTS12P58397 1594 aa23.7■■□□□ 1.39
NR1H3-235ENST00000616973 FHOD3Q2V2M9 1422 aa23.7■■□□□ 1.38
NR1H3-235ENST00000616973 LRRC9Q6ZRR7 1453 aa23.69■■□□□ 1.38
NR1H3-235ENST00000616973 CASKIN1Q8WXD9 1431 aa23.68■■□□□ 1.38
NR1H3-235ENST00000616973 GRIN2BQ13224 1484 aa23.67■■□□□ 1.38
NR1H3-235ENST00000616973 FMN1Q68DA7 1419 aa23.66■■□□□ 1.38
NR1H3-235ENST00000616973 THOC2Q8NI27 1593 aaKnown RBP23.62■■□□□ 1.37
NR1H3-235ENST00000616973 P3H3Q8IVL6 736 aa23.62■■□□□ 1.37
NR1H3-235ENST00000616973 CCNB3Q8WWL7 1395 aa23.61■■□□□ 1.37
NR1H3-235ENST00000616973 SNAPC4Q5SXM2 1469 aa23.59■■□□□ 1.37
NR1H3-235ENST00000616973 ERCC6Q03468 1493 aa23.58■■□□□ 1.37
NR1H3-235ENST00000616973 ZNF608Q9ULD9 1512 aaPredicted RBP23.56■■□□□ 1.36
NR1H3-235ENST00000616973 IQGAP2Q13576 1575 aa23.56■■□□□ 1.36
NR1H3-235ENST00000616973 EIF4G3O43432 1585 aaKnown RBP23.54■■□□□ 1.36
NR1H3-235ENST00000616973 LRRIQ1Q96JM4 1722 aa23.52■■□□□ 1.36
NR1H3-235ENST00000616973 PHLDB1Q86UU1 1377 aa23.48■■□□□ 1.35
NR1H3-235ENST00000616973 CLSPNQ9HAW4 1339 aa23.46■■□□□ 1.35
NR1H3-235ENST00000616973 UGGT2Q9NYU1 1516 aa23.46■■□□□ 1.35
NR1H3-235ENST00000616973 ATP1B4Q9UN42 357 aaPredicted RBP23.43■■□□□ 1.34
NR1H3-235ENST00000616973 MAGI1Q96QZ7 1491 aaPredicted RBP23.41■■□□□ 1.34
NR1H3-235ENST00000616973 DHX57Q6P158 1386 aaKnown RBP23.41■■□□□ 1.34
NR1H3-235ENST00000616973 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.41■■□□□ 1.34
NR1H3-235ENST00000616973 KIAA0586Q9BVV6 1533 aa23.4■■□□□ 1.34
NR1H3-235ENST00000616973 GRIN2AQ12879 1464 aa23.39■■□□□ 1.34
NR1H3-235ENST00000616973 HECW1Q76N89 1606 aa23.39■■□□□ 1.33
NR1H3-235ENST00000616973 CCDC18Q5T9S5 1454 aa23.38■■□□□ 1.33
NR1H3-235ENST00000616973 EHBP1L1Q8N3D4 1523 aa23.36■■□□□ 1.33
NR1H3-235ENST00000616973 SUPT6HQ7KZ85 1726 aaKnown RBP23.35■■□□□ 1.33
NR1H3-235ENST00000616973 MTUS2Q5JR59 1369 aa23.33■■□□□ 1.33
NR1H3-235ENST00000616973 KIAA0556O60303 1618 aa23.32■■□□□ 1.32
NR1H3-235ENST00000616973 SYNJ2O15056 1496 aa23.31■■□□□ 1.32
NR1H3-235ENST00000616973 FGD6Q6ZV73 1430 aa23.29■■□□□ 1.32
NR1H3-235ENST00000616973 DISP1Q96F81 1524 aa23.28■■□□□ 1.32
NR1H3-235ENST00000616973 ARHGEF11O15085 1522 aa23.27■■□□□ 1.32
NR1H3-235ENST00000616973 SETD5Q9C0A6 1442 aa23.27■■□□□ 1.32
NR1H3-235ENST00000616973 NCOA2Q15596 1464 aa23.27■■□□□ 1.32
NR1H3-235ENST00000616973 ITGAEP38570 1179 aa23.26■■□□□ 1.31
NR1H3-235ENST00000616973 RAB3GAP2Q9H2M9 1393 aa23.26■■□□□ 1.31
NR1H3-235ENST00000616973 EPRSP07814 1512 aaKnown RBP23.25■■□□□ 1.31
NR1H3-235ENST00000616973 CEP170Q5SW79 1584 aa23.25■■□□□ 1.31
NR1H3-235ENST00000616973 FAM50AQ14320 339 aaKnown RBP23.25■■□□□ 1.31
NR1H3-235ENST00000616973 MAGI3Q5TCQ9 1506 aa23.24■■□□□ 1.31
NR1H3-235ENST00000616973 MYOM3Q5VTT5 1437 aa23.23■■□□□ 1.31
NR1H3-235ENST00000616973 NUP160Q12769 1436 aa23.2■■□□□ 1.3
NR1H3-235ENST00000616973 ZNF316A6NFI3 1004 aaPredicted RBP23.2■■□□□ 1.3
NR1H3-235ENST00000616973 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
NR1H3-235ENST00000616973 RAPGEF6Q8TEU7 1601 aa23.17■■□□□ 1.3
NR1H3-235ENST00000616973 PTPN23Q9H3S7 1636 aa23.16■■□□□ 1.3
NR1H3-235ENST00000616973 CDK13Q14004 1512 aaKnown RBP23.15■■□□□ 1.3
NR1H3-235ENST00000616973 MAPKBP1O60336 1514 aa23.13■■□□□ 1.29
NR1H3-235ENST00000616973 DIEXFQ68CQ4 756 aaKnown RBP23.12■■□□□ 1.29
NR1H3-235ENST00000616973 TCOF1Q13428 1488 aaKnown RBP23.12■■□□□ 1.29
NR1H3-235ENST00000616973 NUP153P49790 1475 aaKnown RBP23.1■■□□□ 1.29
NR1H3-235ENST00000616973 CARMIL2Q6F5E8 1435 aa23.06■■□□□ 1.28
NR1H3-235ENST00000616973 MIA2Q96PC5 1412 aa23.06■■□□□ 1.28
NR1H3-235ENST00000616973 HFM1A2PYH4 1435 aa23.05■■□□□ 1.28
NR1H3-235ENST00000616973 PTPRKQ15262 1439 aa23.05■■□□□ 1.28
NR1H3-235ENST00000616973 FBLN2P98095 1184 aa23.02■■□□□ 1.28
NR1H3-235ENST00000616973 JPH4Q96JJ6 628 aa23■■□□□ 1.27
NR1H3-235ENST00000616973 GCC2Q8IWJ2 1684 aa22.99■■□□□ 1.27
NR1H3-235ENST00000616973 NAIPQ13075 1403 aa22.97■■□□□ 1.27
NR1H3-235ENST00000616973 CHD1O14646 1710 aa22.97■■□□□ 1.27
NR1H3-235ENST00000616973 ADCY10Q96PN6 1610 aa22.96■■□□□ 1.27
NR1H3-235ENST00000616973 AKNAQ7Z591 1439 aa22.96■■□□□ 1.27
NR1H3-235ENST00000616973 CDK11AQ9UQ88 783 aaPredicted RBP22.96■■□□□ 1.27
NR1H3-235ENST00000616973 PLB1Q6P1J6 1458 aa22.95■■□□□ 1.26
NR1H3-235ENST00000616973 ABCA8O94911 1581 aa22.94■■□□□ 1.26
NR1H3-235ENST00000616973 UACAQ9BZF9 1416 aa22.93■■□□□ 1.26
NR1H3-235ENST00000616973 TROQ12816 1431 aaPredicted RBP22.92■■□□□ 1.26
NR1H3-235ENST00000616973 ITSN2Q9NZM3 1697 aa22.91■■□□□ 1.26
NR1H3-235ENST00000616973 TIMELESSQ9UNS1 1208 aa22.9■■□□□ 1.26
NR1H3-235ENST00000616973 ARID3CA6NKF2 412 aa22.89■■□□□ 1.25
NR1H3-235ENST00000616973 DNMT1P26358 1616 aaKnown RBP22.88■■□□□ 1.25
NR1H3-235ENST00000616973 SHROOM2Q13796 1616 aa22.86■■□□□ 1.25
NR1H3-235ENST00000616973 PRG4Q92954 1404 aaPredicted RBP22.84■■□□□ 1.25
NR1H3-235ENST00000616973 KIF14Q15058 1648 aa22.82■■□□□ 1.24
NR1H3-235ENST00000616973 ROCK1Q13464 1354 aa22.81■■□□□ 1.24
NR1H3-235ENST00000616973 DAPK1P53355 1430 aa22.81■■□□□ 1.24
NR1H3-235ENST00000616973 SIN3AQ96ST3 1273 aa22.79■■□□□ 1.24
NR1H3-235ENST00000616973 ACIN1Q9UKV3 1341 aaKnown RBP22.78■■□□□ 1.24
NR1H3-235ENST00000616973 ATP10BO94823 1461 aa22.78■■□□□ 1.24
NR1H3-235ENST00000616973 GPATCH8Q9UKJ3 1502 aaKnown RBP22.77■■□□□ 1.24
NR1H3-235ENST00000616973 ABCC5O15440 1437 aa22.76■■□□□ 1.23
NR1H3-235ENST00000616973 KDM6BO15054 1643 aa22.75■■□□□ 1.23
NR1H3-235ENST00000616973 CDC42BPAQ5VT25 1732 aa22.75■■□□□ 1.23
NR1H3-235ENST00000616973 PTPRGP23470 1445 aa22.74■■□□□ 1.23
NR1H3-235ENST00000616973 RRP7BPQ9NSQ0 103 aa22.74■■□□□ 1.23
NR1H3-235ENST00000616973 ADGBQ8N7X0 1667 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms