RNA–Protein interactions for RNA: ENST00000616702.1

CCL3L3-202, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 2

Gene CCL3L3, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-202ENST00000616702 NUP160Q12769 1436 aa23.45■■□□□ 1.34
CCL3L3-202ENST00000616702 KIF27Q86VH2 1401 aa23.44■■□□□ 1.34
CCL3L3-202ENST00000616702 CEP170Q5SW79 1584 aa23.43■■□□□ 1.34
CCL3L3-202ENST00000616702 IGF1RP08069 1367 aa23.38■■□□□ 1.33
CCL3L3-202ENST00000616702 TRHP20396 242 aaPredicted RBP23.37■■□□□ 1.33
CCL3L3-202ENST00000616702 PIAS4Q8N2W9 510 aaPredicted RBP23.37■■□□□ 1.33
CCL3L3-202ENST00000616702 JPH4Q96JJ6 628 aa23.31■■□□□ 1.32
CCL3L3-202ENST00000616702 ERCC6L2Q5T890 1561 aa23.31■■□□□ 1.32
CCL3L3-202ENST00000616702 PRG4Q92954 1404 aaPredicted RBP23.26■■□□□ 1.31
CCL3L3-202ENST00000616702 CARMIL1Q5VZK9 1371 aa23.26■■□□□ 1.31
CCL3L3-202ENST00000616702 SHROOM2Q13796 1616 aa23.24■■□□□ 1.31
CCL3L3-202ENST00000616702 CUL7Q14999 1698 aa23.24■■□□□ 1.31
CCL3L3-202ENST00000616702 RUSC2Q8N2Y8 1516 aa23.2■■□□□ 1.3
CCL3L3-202ENST00000616702 KIAA0586Q9BVV6 1533 aa23.17■■□□□ 1.3
CCL3L3-202ENST00000616702 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
CCL3L3-202ENST00000616702 TTBK1Q5TCY1 1321 aaPredicted RBP23.04■■□□□ 1.28
CCL3L3-202ENST00000616702 NPM1P06748 294 aaKnown RBP eCLIP23.02■■□□□ 1.28
CCL3L3-202ENST00000616702 MSH5O43196 834 aa22.99■■□□□ 1.27
CCL3L3-202ENST00000616702 CARMIL2Q6F5E8 1435 aa22.98■■□□□ 1.27
CCL3L3-202ENST00000616702 IQGAP2Q13576 1575 aa22.97■■□□□ 1.27
CCL3L3-202ENST00000616702 PTPRGP23470 1445 aa22.95■■□□□ 1.26
CCL3L3-202ENST00000616702 TNIKQ9UKE5 1360 aa22.92■■□□□ 1.26
CCL3L3-202ENST00000616702 ADCY10Q96PN6 1610 aa22.86■■□□□ 1.25
CCL3L3-202ENST00000616702 PRXQ9BXM0 1461 aa22.85■■□□□ 1.25
CCL3L3-202ENST00000616702 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
CCL3L3-202ENST00000616702 DISP1Q96F81 1524 aa22.84■■□□□ 1.25
CCL3L3-202ENST00000616702 FAM69CQ0P6D2 419 aa22.84■■□□□ 1.25
CCL3L3-202ENST00000616702 UGGT2Q9NYU1 1516 aa22.82■■□□□ 1.24
CCL3L3-202ENST00000616702 MAPKBP1O60336 1514 aa22.79■■□□□ 1.24
CCL3L3-202ENST00000616702 FAM9AQ8IZU1 332 aaPredicted RBP22.79■■□□□ 1.24
CCL3L3-202ENST00000616702 ABCC10Q5T3U5 1492 aa22.77■■□□□ 1.24
CCL3L3-202ENST00000616702 UACAQ9BZF9 1416 aa22.76■■□□□ 1.23
CCL3L3-202ENST00000616702 KIAA0556O60303 1618 aa22.75■■□□□ 1.23
CCL3L3-202ENST00000616702 CTTNBP2Q8WZ74 1663 aa22.74■■□□□ 1.23
CCL3L3-202ENST00000616702 ABCC2Q92887 1545 aa22.73■■□□□ 1.23
CCL3L3-202ENST00000616702 EEA1Q15075 1411 aa22.73■■□□□ 1.23
CCL3L3-202ENST00000616702 GOLGA3Q08378 1498 aa22.72■■□□□ 1.23
CCL3L3-202ENST00000616702 UHRF1BP1LA0JNW5 1464 aa22.71■■□□□ 1.23
CCL3L3-202ENST00000616702 KIF13AQ9H1H9 1805 aa22.71■■□□□ 1.23
CCL3L3-202ENST00000616702 DIP2BQ9P265 1576 aa22.68■■□□□ 1.22
CCL3L3-202ENST00000616702 P3H3Q8IVL6 736 aa22.66■■□□□ 1.22
CCL3L3-202ENST00000616702 ASXL2Q76L83 1435 aa22.65■■□□□ 1.22
CCL3L3-202ENST00000616702 RANGAP1P46060 587 aaPredicted RBP22.64■■□□□ 1.21
CCL3L3-202ENST00000616702 PLB1Q6P1J6 1458 aa22.63■■□□□ 1.21
CCL3L3-202ENST00000616702 KDM5BQ9UGL1 1544 aa22.61■■□□□ 1.21
CCL3L3-202ENST00000616702 EHMT2Q96KQ7 1210 aa22.57■■□□□ 1.2
CCL3L3-202ENST00000616702 ZCCHC11Q5TAX3 1644 aaKnown RBP22.54■■□□□ 1.2
CCL3L3-202ENST00000616702 ARID3CA6NKF2 412 aa22.52■■□□□ 1.2
CCL3L3-202ENST00000616702 ABCA8O94911 1581 aa22.51■■□□□ 1.19
CCL3L3-202ENST00000616702 EPRSP07814 1512 aaKnown RBP22.5■■□□□ 1.19
CCL3L3-202ENST00000616702 TSPOAP1O95153 1857 aa22.49■■□□□ 1.19
CCL3L3-202ENST00000616702 GLI2P10070 1586 aa22.49■■□□□ 1.19
CCL3L3-202ENST00000616702 UBTFP17480 764 aaKnown RBP22.48■■□□□ 1.19
CCL3L3-202ENST00000616702 KCNH8Q96L42 1107 aa22.48■■□□□ 1.19
CCL3L3-202ENST00000616702 KIF21BO75037 1637 aa22.47■■□□□ 1.19
CCL3L3-202ENST00000616702 WDR7Q9Y4E6 1490 aa22.47■■□□□ 1.19
CCL3L3-202ENST00000616702 SAMD9Q5K651 1589 aa22.46■■□□□ 1.19
CCL3L3-202ENST00000616702 KDM6BO15054 1643 aa22.44■■□□□ 1.18
CCL3L3-202ENST00000616702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.43■■□□□ 1.18
CCL3L3-202ENST00000616702 HNRNPUL2Q1KMD3 747 aaKnown RBP22.43■■□□□ 1.18
CCL3L3-202ENST00000616702 FHOD3Q2V2M9 1422 aa22.42■■□□□ 1.18
CCL3L3-202ENST00000616702 ATP10BO94823 1461 aa22.39■■□□□ 1.17
CCL3L3-202ENST00000616702 MAP3K4Q9Y6R4 1608 aa22.35■■□□□ 1.17
CCL3L3-202ENST00000616702 TEX14Q8IWB6 1497 aa22.35■■□□□ 1.17
CCL3L3-202ENST00000616702 CD109Q6YHK3 1445 aa22.34■■□□□ 1.17
CCL3L3-202ENST00000616702 PPRC1Q5VV67 1664 aaKnown RBP22.34■■□□□ 1.17
CCL3L3-202ENST00000616702 RAPGEF6Q8TEU7 1601 aa22.34■■□□□ 1.17
CCL3L3-202ENST00000616702 EFCAB5A4FU69 1503 aa22.33■■□□□ 1.17
CCL3L3-202ENST00000616702 NUP153P49790 1475 aaKnown RBP22.28■■□□□ 1.16
CCL3L3-202ENST00000616702 COL17A1Q9UMD9 1497 aaPredicted RBP22.27■■□□□ 1.16
CCL3L3-202ENST00000616702 ATP1B4Q9UN42 357 aaPredicted RBP22.26■■□□□ 1.15
CCL3L3-202ENST00000616702 MAGI3Q5TCQ9 1506 aa22.25■■□□□ 1.15
CCL3L3-202ENST00000616702 PLEKHD1A6NEE1 506 aa22.24■■□□□ 1.15
CCL3L3-202ENST00000616702 CFAP43Q8NDM7 1665 aa22.23■■□□□ 1.15
CCL3L3-202ENST00000616702 ARHGAP35Q9NRY4 1499 aa22.2■■□□□ 1.14
CCL3L3-202ENST00000616702 FMN1Q68DA7 1419 aa22.18■■□□□ 1.14
CCL3L3-202ENST00000616702 KDM4FA0A1W2PPD8 638 aa22.14■■□□□ 1.13
CCL3L3-202ENST00000616702 ABCA9Q8IUA7 1624 aa22.13■■□□□ 1.13
CCL3L3-202ENST00000616702 CDK13Q14004 1512 aaKnown RBP22.11■■□□□ 1.13
CCL3L3-202ENST00000616702 PHLDB1Q86UU1 1377 aa22.08■■□□□ 1.12
CCL3L3-202ENST00000616702 CDK11AQ9UQ88 783 aaPredicted RBP22.07■■□□□ 1.12
CCL3L3-202ENST00000616702 HECW1Q76N89 1606 aa22.06■■□□□ 1.12
CCL3L3-202ENST00000616702 ARAP3Q8WWN8 1544 aa22.06■■□□□ 1.12
CCL3L3-202ENST00000616702 RAPGEF3O95398 923 aa22.05■■□□□ 1.12
CCL3L3-202ENST00000616702 NEO1Q92859 1461 aa22.04■■□□□ 1.12
CCL3L3-202ENST00000616702 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.02■■□□□ 1.12
CCL3L3-202ENST00000616702 ADGRL1O94910 1474 aa22.01■■□□□ 1.11
CCL3L3-202ENST00000616702 CLIP1P30622 1438 aa22■■□□□ 1.11
CCL3L3-202ENST00000616702 FANCAO15360 1455 aa21.97■■□□□ 1.11
CCL3L3-202ENST00000616702 AKNAQ7Z591 1439 aa21.97■■□□□ 1.11
CCL3L3-202ENST00000616702 TTC37Q6PGP7 1564 aa21.96■■□□□ 1.11
CCL3L3-202ENST00000616702 CASKIN1Q8WXD9 1431 aa21.96■■□□□ 1.11
CCL3L3-202ENST00000616702 TROQ12816 1431 aaPredicted RBP21.93■■□□□ 1.1
CCL3L3-202ENST00000616702 DENND4BO75064 1496 aaPredicted RBP21.92■■□□□ 1.1
CCL3L3-202ENST00000616702 PLCH2O75038 1416 aa21.92■■□□□ 1.1
CCL3L3-202ENST00000616702 PCF11O94913 1555 aaKnown RBP21.91■■□□□ 1.1
CCL3L3-202ENST00000616702 EFCAB2Q5VUJ9 269 aa21.9■■□□□ 1.1
CCL3L3-202ENST00000616702 CCDC18Q5T9S5 1454 aa21.9■■□□□ 1.1
CCL3L3-202ENST00000616702 CFAP74Q9C0B2 1584 aa21.89■■□□□ 1.09
CCL3L3-202ENST00000616702 KIF14Q15058 1648 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms