RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 MRC2Q9UBG0 1479 aa23.57■■□□□ 1.36
SEMA3B-212ENST00000616701 CUL7Q14999 1698 aa23.56■■□□□ 1.36
SEMA3B-212ENST00000616701 TARBP1Q13395 1621 aaKnown RBP23.54■■□□□ 1.36
SEMA3B-212ENST00000616701 AQRO60306 1485 aaKnown RBP eCLIP23.54■■□□□ 1.365e-8■■■■□ 25.4
SEMA3B-212ENST00000616701 FHOD3Q2V2M9 1422 aa23.52■■□□□ 1.36
SEMA3B-212ENST00000616701 ERCC6Q03468 1493 aa23.46■■□□□ 1.35
SEMA3B-212ENST00000616701 CTTNBP2Q8WZ74 1663 aa23.44■■□□□ 1.34
SEMA3B-212ENST00000616701 ZNF608Q9ULD9 1512 aaPredicted RBP23.42■■□□□ 1.34
SEMA3B-212ENST00000616701 PCF11O94913 1555 aaKnown RBP23.38■■□□□ 1.33
SEMA3B-212ENST00000616701 ITGAEP38570 1179 aa23.38■■□□□ 1.33
SEMA3B-212ENST00000616701 PBRM1Q86U86 1689 aa23.37■■□□□ 1.33
SEMA3B-212ENST00000616701 FHAD1B1AJZ9 1412 aa23.37■■□□□ 1.33
SEMA3B-212ENST00000616701 WDR62O43379 1518 aa23.36■■□□□ 1.33
SEMA3B-212ENST00000616701 TIAM1Q13009 1591 aa23.36■■□□□ 1.33
SEMA3B-212ENST00000616701 EFCAB5A4FU69 1503 aa23.32■■□□□ 1.32
SEMA3B-212ENST00000616701 IFT140Q96RY7 1462 aa23.32■■□□□ 1.32
SEMA3B-212ENST00000616701 GRIN2BQ13224 1484 aa23.3■■□□□ 1.32
SEMA3B-212ENST00000616701 LRRC9Q6ZRR7 1453 aa23.29■■□□□ 1.32
SEMA3B-212ENST00000616701 RRBP1Q9P2E9 1410 aaKnown RBP23.27■■□□□ 1.32
SEMA3B-212ENST00000616701 CCNB3Q8WWL7 1395 aa23.27■■□□□ 1.32
SEMA3B-212ENST00000616701 ADAMTS12P58397 1594 aa23.27■■□□□ 1.32
SEMA3B-212ENST00000616701 CASKIN1Q8WXD9 1431 aa23.24■■□□□ 1.31
SEMA3B-212ENST00000616701 PHLDB1Q86UU1 1377 aa23.23■■□□□ 1.31
SEMA3B-212ENST00000616701 MAP3K1Q13233 1512 aa23.23■■□□□ 1.31
SEMA3B-212ENST00000616701 THOC2Q8NI27 1593 aaKnown RBP23.22■■□□□ 1.31
SEMA3B-212ENST00000616701 FYCO1Q9BQS8 1478 aa23.22■■□□□ 1.31
SEMA3B-212ENST00000616701 FMN1Q68DA7 1419 aa23.22■■□□□ 1.31
SEMA3B-212ENST00000616701 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
SEMA3B-212ENST00000616701 SAMD9Q5K651 1589 aa23.21■■□□□ 1.31
SEMA3B-212ENST00000616701 CFAP43Q8NDM7 1665 aa23.19■■□□□ 1.3
SEMA3B-212ENST00000616701 FAM50AQ14320 339 aaKnown RBP23.19■■□□□ 1.3
SEMA3B-212ENST00000616701 EIF4G3O43432 1585 aaKnown RBP23.19■■□□□ 1.3
SEMA3B-212ENST00000616701 FBLN2P98095 1184 aa23.18■■□□□ 1.3
SEMA3B-212ENST00000616701 ARID3CA6NKF2 412 aa23.17■■□□□ 1.3
SEMA3B-212ENST00000616701 IQGAP2Q13576 1575 aa23.14■■□□□ 1.3
SEMA3B-212ENST00000616701 PRKCSHP14314 528 aaPredicted RBP23.13■■□□□ 1.29
SEMA3B-212ENST00000616701 CHMP7Q8WUX9 453 aaPredicted RBP23.1■■□□□ 1.29
SEMA3B-212ENST00000616701 MTUS2Q5JR59 1369 aa23.1■■□□□ 1.29
SEMA3B-212ENST00000616701 LRRIQ1Q96JM4 1722 aa23.08■■□□□ 1.29
SEMA3B-212ENST00000616701 GRIN2AQ12879 1464 aa23.06■■□□□ 1.28
SEMA3B-212ENST00000616701 DHX57Q6P158 1386 aaKnown RBP23.05■■□□□ 1.28
SEMA3B-212ENST00000616701 KIAA0586Q9BVV6 1533 aa23■■□□□ 1.27
SEMA3B-212ENST00000616701 RAB3GAP2Q9H2M9 1393 aa22.98■■□□□ 1.27
SEMA3B-212ENST00000616701 BCL11AQ9H165 835 aa22.98■■□□□ 1.27
SEMA3B-212ENST00000616701 MAGI1Q96QZ7 1491 aaPredicted RBP22.97■■□□□ 1.27
SEMA3B-212ENST00000616701 UGGT2Q9NYU1 1516 aa22.96■■□□□ 1.27
SEMA3B-212ENST00000616701 SYNJ2O15056 1496 aa22.95■■□□□ 1.26
SEMA3B-212ENST00000616701 CDK13Q14004 1512 aaKnown RBP22.94■■□□□ 1.26
SEMA3B-212ENST00000616701 MAGI3Q5TCQ9 1506 aa22.94■■□□□ 1.26
SEMA3B-212ENST00000616701 DISP1Q96F81 1524 aa22.94■■□□□ 1.26
SEMA3B-212ENST00000616701 NCOA2Q15596 1464 aa22.93■■□□□ 1.26
SEMA3B-212ENST00000616701 CEP170Q5SW79 1584 aa22.93■■□□□ 1.26
SEMA3B-212ENST00000616701 FGD6Q6ZV73 1430 aa22.93■■□□□ 1.26
SEMA3B-212ENST00000616701 KIAA0556O60303 1618 aa22.9■■□□□ 1.26
SEMA3B-212ENST00000616701 EPRSP07814 1512 aaKnown RBP22.9■■□□□ 1.26
SEMA3B-212ENST00000616701 HECW1Q76N89 1606 aa22.9■■□□□ 1.26
SEMA3B-212ENST00000616701 SETD5Q9C0A6 1442 aa22.9■■□□□ 1.26
SEMA3B-212ENST00000616701 CCDC18Q5T9S5 1454 aa22.87■■□□□ 1.25
SEMA3B-212ENST00000616701 EHBP1L1Q8N3D4 1523 aa22.87■■□□□ 1.25
SEMA3B-212ENST00000616701 DIEXFQ68CQ4 756 aaKnown RBP22.86■■□□□ 1.25
SEMA3B-212ENST00000616701 ZNF316A6NFI3 1004 aaPredicted RBP22.86■■□□□ 1.25
SEMA3B-212ENST00000616701 SUPT6HQ7KZ85 1726 aaKnown RBP22.85■■□□□ 1.25
SEMA3B-212ENST00000616701 JPH4Q96JJ6 628 aa22.85■■□□□ 1.25
SEMA3B-212ENST00000616701 MYOM3Q5VTT5 1437 aa22.84■■□□□ 1.25
SEMA3B-212ENST00000616701 CLSPNQ9HAW4 1339 aa22.81■■□□□ 1.24
SEMA3B-212ENST00000616701 PTPRKQ15262 1439 aa22.8■■□□□ 1.24
SEMA3B-212ENST00000616701 NUP160Q12769 1436 aa22.79■■□□□ 1.24
SEMA3B-212ENST00000616701 NUP153P49790 1475 aaKnown RBP22.78■■□□□ 1.24
SEMA3B-212ENST00000616701 PLB1Q6P1J6 1458 aa22.77■■□□□ 1.24
SEMA3B-212ENST00000616701 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.77■■□□□ 1.24
SEMA3B-212ENST00000616701 CHIC2Q9UKJ5 165 aa22.77■■□□□ 1.23
SEMA3B-212ENST00000616701 RAPGEF6Q8TEU7 1601 aa22.74■■□□□ 1.23
SEMA3B-212ENST00000616701 ARHGEF11O15085 1522 aa22.73■■□□□ 1.23
SEMA3B-212ENST00000616701 MAPKBP1O60336 1514 aa22.73■■□□□ 1.23
SEMA3B-212ENST00000616701 PTPN23Q9H3S7 1636 aa22.73■■□□□ 1.23
SEMA3B-212ENST00000616701 NEUROD1Q13562 356 aa22.72■■□□□ 1.23
SEMA3B-212ENST00000616701 SIN3AQ96ST3 1273 aa22.72■■□□□ 1.23
SEMA3B-212ENST00000616701 CARMIL2Q6F5E8 1435 aa22.72■■□□□ 1.23
SEMA3B-212ENST00000616701 RRP7BPQ9NSQ0 103 aa22.71■■□□□ 1.23
SEMA3B-212ENST00000616701 PRG4Q92954 1404 aaPredicted RBP22.67■■□□□ 1.22
SEMA3B-212ENST00000616701 CDK11AQ9UQ88 783 aaPredicted RBP22.65■■□□□ 1.22
SEMA3B-212ENST00000616701 ZNF644Q9H582 1327 aaPredicted RBP22.64■■□□□ 1.22
SEMA3B-212ENST00000616701 CHD1O14646 1710 aa22.62■■□□□ 1.21
SEMA3B-212ENST00000616701 HFM1A2PYH4 1435 aa22.61■■□□□ 1.21
SEMA3B-212ENST00000616701 NAIPQ13075 1403 aa22.61■■□□□ 1.21
SEMA3B-212ENST00000616701 TCOF1Q13428 1488 aaKnown RBP22.59■■□□□ 1.21
SEMA3B-212ENST00000616701 ZNF777Q9ULD5 760 aaPredicted RBP22.57■■□□□ 1.2
SEMA3B-212ENST00000616701 GTF3C3Q9Y5Q9 886 aa22.57■■□□□ 1.2
SEMA3B-212ENST00000616701 MIA2Q96PC5 1412 aa22.56■■□□□ 1.2
SEMA3B-212ENST00000616701 TROQ12816 1431 aaPredicted RBP22.56■■□□□ 1.2
SEMA3B-212ENST00000616701 PTPRGP23470 1445 aa22.53■■□□□ 1.2
SEMA3B-212ENST00000616701 KIF14Q15058 1648 aa22.53■■□□□ 1.2
SEMA3B-212ENST00000616701 TRIM52Q96A61 297 aa22.53■■□□□ 1.2
SEMA3B-212ENST00000616701 CFDP1Q9UEE9 299 aaPredicted RBP22.52■■□□□ 1.2
SEMA3B-212ENST00000616701 PLEKHD1A6NEE1 506 aa22.51■■□□□ 1.19
SEMA3B-212ENST00000616701 ABCA8O94911 1581 aa22.5■■□□□ 1.19
SEMA3B-212ENST00000616701 ACIN1Q9UKV3 1341 aaKnown RBP22.5■■□□□ 1.19
SEMA3B-212ENST00000616701 ATP10BO94823 1461 aa22.49■■□□□ 1.19
SEMA3B-212ENST00000616701 UACAQ9BZF9 1416 aa22.49■■□□□ 1.19
SEMA3B-212ENST00000616701 MIER1Q8N108 512 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms