RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 GRIN2BQ13224 1484 aa15.59■□□□□ 0.09
AL353770.3-201ENST00000616253 EIF4G3O43432 1585 aaKnown RBP15.58■□□□□ 0.08
AL353770.3-201ENST00000616253 TTBK1Q5TCY1 1321 aaPredicted RBP15.56■□□□□ 0.08
AL353770.3-201ENST00000616253 FHAD1B1AJZ9 1412 aa15.55■□□□□ 0.08
AL353770.3-201ENST00000616253 EFCAB5A4FU69 1503 aa15.51■□□□□ 0.07
AL353770.3-201ENST00000616253 APLP2Q06481 763 aa15.51■□□□□ 0.07
AL353770.3-201ENST00000616253 SNAPC4Q5SXM2 1469 aa15.5■□□□□ 0.07
AL353770.3-201ENST00000616253 FHOD3Q2V2M9 1422 aa15.46■□□□□ 0.06
AL353770.3-201ENST00000616253 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
AL353770.3-201ENST00000616253 SAMD9Q5K651 1589 aa15.45■□□□□ 0.06
AL353770.3-201ENST00000616253 MAGI1Q96QZ7 1491 aaPredicted RBP15.44■□□□□ 0.06
AL353770.3-201ENST00000616253 P3H3Q8IVL6 736 aa15.44■□□□□ 0.06
AL353770.3-201ENST00000616253 PCF11O94913 1555 aaKnown RBP15.43■□□□□ 0.06
AL353770.3-201ENST00000616253 IQGAP2Q13576 1575 aa15.43■□□□□ 0.06
AL353770.3-201ENST00000616253 HRCP23327 699 aa15.42■□□□□ 0.06
AL353770.3-201ENST00000616253 GRIN2AQ12879 1464 aa15.41■□□□□ 0.06
AL353770.3-201ENST00000616253 SYNJ2O15056 1496 aa15.39■□□□□ 0.05
AL353770.3-201ENST00000616253 TIAM1Q13009 1591 aa15.38■□□□□ 0.05
AL353770.3-201ENST00000616253 FYCO1Q9BQS8 1478 aa15.37■□□□□ 0.05
AL353770.3-201ENST00000616253 MAP3K1Q13233 1512 aa15.37■□□□□ 0.05
AL353770.3-201ENST00000616253 CFAP43Q8NDM7 1665 aa15.37■□□□□ 0.05
AL353770.3-201ENST00000616253 KANK4Q5T7N3 995 aaPredicted RBP15.36■□□□□ 0.05
AL353770.3-201ENST00000616253 FMN1Q68DA7 1419 aa15.36■□□□□ 0.05
AL353770.3-201ENST00000616253 CASKIN1Q8WXD9 1431 aa15.35■□□□□ 0.05
AL353770.3-201ENST00000616253 KIAA0586Q9BVV6 1533 aa15.34■□□□□ 0.05
AL353770.3-201ENST00000616253 UGGT2Q9NYU1 1516 aa15.33■□□□□ 0.05
AL353770.3-201ENST00000616253 CEP170Q5SW79 1584 aa15.33■□□□□ 0.04
AL353770.3-201ENST00000616253 CHMP7Q8WUX9 453 aaPredicted RBP15.33■□□□□ 0.04
AL353770.3-201ENST00000616253 FBLN2P98095 1184 aa15.29■□□□□ 0.04
AL353770.3-201ENST00000616253 LRRC9Q6ZRR7 1453 aa15.29■□□□□ 0.04
AL353770.3-201ENST00000616253 ATP1B4Q9UN42 357 aaPredicted RBP15.29■□□□□ 0.04
AL353770.3-201ENST00000616253 NUP160Q12769 1436 aa15.28■□□□□ 0.04
AL353770.3-201ENST00000616253 KIAA0556O60303 1618 aa15.28■□□□□ 0.04
AL353770.3-201ENST00000616253 LRRIQ1Q96JM4 1722 aa15.27■□□□□ 0.04
AL353770.3-201ENST00000616253 DISP1Q96F81 1524 aa15.25■□□□□ 0.03
AL353770.3-201ENST00000616253 CHD1O14646 1710 aa15.24■□□□□ 0.03
AL353770.3-201ENST00000616253 RIMBP3CA6NJZ7 1639 aa15.23■□□□□ 0.03
AL353770.3-201ENST00000616253 RIMBP3BA6NNM3 1639 aa15.23■□□□□ 0.03
AL353770.3-201ENST00000616253 RIMBP3Q9UFD9 1639 aa15.23■□□□□ 0.03
AL353770.3-201ENST00000616253 RRBP1Q9P2E9 1410 aaKnown RBP15.23■□□□□ 0.03
AL353770.3-201ENST00000616253 HECW1Q76N89 1606 aa15.22■□□□□ 0.03
AL353770.3-201ENST00000616253 HNRNPUL2Q1KMD3 747 aaKnown RBP15.2■□□□□ 0.02
AL353770.3-201ENST00000616253 CCDC18Q5T9S5 1454 aa15.18■□□□□ 0.02
AL353770.3-201ENST00000616253 ARHGEF11O15085 1522 aa15.18■□□□□ 0.02
AL353770.3-201ENST00000616253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
AL353770.3-201ENST00000616253 CCNB3Q8WWL7 1395 aa15.17■□□□□ 0.02
AL353770.3-201ENST00000616253 PHLDB1Q86UU1 1377 aa15.16■□□□□ 0.02
AL353770.3-201ENST00000616253 MTUS2Q5JR59 1369 aa15.15■□□□□ 0.02
AL353770.3-201ENST00000616253 ZEB1P37275 1124 aaPredicted RBP15.15■□□□□ 0.02
AL353770.3-201ENST00000616253 CARMIL2Q6F5E8 1435 aa15.15■□□□□ 0.02
AL353770.3-201ENST00000616253 EHBP1L1Q8N3D4 1523 aa15.15■□□□□ 0.02
AL353770.3-201ENST00000616253 RAPGEF6Q8TEU7 1601 aa15.15■□□□□ 0.02
AL353770.3-201ENST00000616253 JPH4Q96JJ6 628 aa15.15■□□□□ 0.02
AL353770.3-201ENST00000616253 EPRSP07814 1512 aaKnown RBP15.14■□□□□ 0.01
AL353770.3-201ENST00000616253 CDK13Q14004 1512 aaKnown RBP15.12■□□□□ 0.01
AL353770.3-201ENST00000616253 CCER1Q8TC90 406 aaPredicted RBP15.12■□□□□ 0.01
AL353770.3-201ENST00000616253 MAGI3Q5TCQ9 1506 aa15.12■□□□□ 0.01
AL353770.3-201ENST00000616253 SUPT6HQ7KZ85 1726 aaKnown RBP15.12■□□□□ 0.01
AL353770.3-201ENST00000616253 NUP153P49790 1475 aaKnown RBP15.09■□□□□ 0.01
AL353770.3-201ENST00000616253 NCOA2Q15596 1464 aa15.08■□□□□ 0.01
AL353770.3-201ENST00000616253 SHROOM2Q13796 1616 aa15.07■□□□□ 0
AL353770.3-201ENST00000616253 ARID3CA6NKF2 412 aa15.07■□□□□ 0
AL353770.3-201ENST00000616253 PLB1Q6P1J6 1458 aa15.07■□□□□ 0
AL353770.3-201ENST00000616253 PRG4Q92954 1404 aaPredicted RBP15.06■□□□□ 0
AL353770.3-201ENST00000616253 FGD6Q6ZV73 1430 aa15.05■□□□□ -0
AL353770.3-201ENST00000616253 ABCA8O94911 1581 aa15.03■□□□□ -0
AL353770.3-201ENST00000616253 ITGAEP38570 1179 aa15.03■□□□□ -0
AL353770.3-201ENST00000616253 FAM50AQ14320 339 aaKnown RBP15.03■□□□□ -0
AL353770.3-201ENST00000616253 MYOM3Q5VTT5 1437 aa15.02■□□□□ -0
AL353770.3-201ENST00000616253 CLASP1Q7Z460 1538 aa15.02■□□□□ -0
AL353770.3-201ENST00000616253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.01□□□□□ -0.01
AL353770.3-201ENST00000616253 CYB5RLQ6IPT4 315 aa14.99□□□□□ -0.01
AL353770.3-201ENST00000616253 PTPN23Q9H3S7 1636 aa14.98□□□□□ -0.01
AL353770.3-201ENST00000616253 ERCC6L2Q5T890 1561 aa14.98□□□□□ -0.01
AL353770.3-201ENST00000616253 PTPRGP23470 1445 aa14.98□□□□□ -0.01
AL353770.3-201ENST00000616253 CDK11AQ9UQ88 783 aaPredicted RBP14.96□□□□□ -0.01
AL353770.3-201ENST00000616253 TROQ12816 1431 aaPredicted RBP14.94□□□□□ -0.02
AL353770.3-201ENST00000616253 ADCY10Q96PN6 1610 aa14.94□□□□□ -0.02
AL353770.3-201ENST00000616253 TCOF1Q13428 1488 aaKnown RBP14.92□□□□□ -0.02
AL353770.3-201ENST00000616253 KIF14Q15058 1648 aa14.92□□□□□ -0.02
AL353770.3-201ENST00000616253 ATP10BO94823 1461 aa14.92□□□□□ -0.02
AL353770.3-201ENST00000616253 MIA2Q96PC5 1412 aa14.91□□□□□ -0.02
AL353770.3-201ENST00000616253 SETD5Q9C0A6 1442 aa14.91□□□□□ -0.02
AL353770.3-201ENST00000616253 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
AL353770.3-201ENST00000616253 DHX57Q6P158 1386 aaKnown RBP14.91□□□□□ -0.02
AL353770.3-201ENST00000616253 RAB3GAP2Q9H2M9 1393 aa14.91□□□□□ -0.02
AL353770.3-201ENST00000616253 UACAQ9BZF9 1416 aa14.9□□□□□ -0.02
AL353770.3-201ENST00000616253 ITSN2Q9NZM3 1697 aa14.88□□□□□ -0.03
AL353770.3-201ENST00000616253 PTPRKQ15262 1439 aa14.88□□□□□ -0.03
AL353770.3-201ENST00000616253 ABCC2Q92887 1545 aa14.87□□□□□ -0.03
AL353770.3-201ENST00000616253 PLEKHD1A6NEE1 506 aa14.85□□□□□ -0.03
AL353770.3-201ENST00000616253 CLSPNQ9HAW4 1339 aa14.83□□□□□ -0.04
AL353770.3-201ENST00000616253 HFM1A2PYH4 1435 aa14.83□□□□□ -0.04
AL353770.3-201ENST00000616253 CDC42BPAQ5VT25 1732 aa14.83□□□□□ -0.04
AL353770.3-201ENST00000616253 GPATCH8Q9UKJ3 1502 aaKnown RBP14.82□□□□□ -0.04
AL353770.3-201ENST00000616253 ABCC10Q5T3U5 1492 aa14.82□□□□□ -0.04
AL353770.3-201ENST00000616253 DNMT1P26358 1616 aaKnown RBP14.81□□□□□ -0.04
AL353770.3-201ENST00000616253 UHRF1BP1LA0JNW5 1464 aa14.8□□□□□ -0.04
AL353770.3-201ENST00000616253 GCC2Q8IWJ2 1684 aa14.8□□□□□ -0.04
AL353770.3-201ENST00000616253 CAMSAP2Q08AD1 1489 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms