RNA–Protein interactions for RNA: ENST00000616058.4

SUCO-210, Transcript of SUN domain containing ossification factor, humanhuman

TSL 1 (best) BASIC

Gene SUCO, Length 5,495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCO-210ENST00000616058 IRX6P78412 446 aaPredicted RBP20.76■□□□□ 0.91
SUCO-210ENST00000616058 CUX2O14529 1486 aa20.75■□□□□ 0.91
SUCO-210ENST00000616058 CHGAP10645 457 aaKnown RBP20.75■□□□□ 0.91
SUCO-210ENST00000616058 KANK4Q5T7N3 995 aaPredicted RBP20.75■□□□□ 0.91
SUCO-210ENST00000616058 CCNB3Q8WWL7 1395 aa20.75■□□□□ 0.91
SUCO-210ENST00000616058 TMC1Q8TDI8 760 aa20.74■□□□□ 0.91
SUCO-210ENST00000616058 CARMIL1Q5VZK9 1371 aa20.73■□□□□ 0.91
SUCO-210ENST00000616058 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
SUCO-210ENST00000616058 NPM2Q86SE8 214 aaKnown RBP20.7■□□□□ 0.9
SUCO-210ENST00000616058 BCL11AQ9H165 835 aa20.67■□□□□ 0.9
SUCO-210ENST00000616058 ANP32AP39687 249 aaKnown RBP20.67■□□□□ 0.9
SUCO-210ENST00000616058 PLEKHD1A6NEE1 506 aa20.63■□□□□ 0.89
SUCO-210ENST00000616058 CFDP1Q9UEE9 299 aaPredicted RBP20.62■□□□□ 0.89
SUCO-210ENST00000616058 SENP3-EIF4A1A0A087X0R7 540 aa20.61■□□□□ 0.89
SUCO-210ENST00000616058 FHAD1B1AJZ9 1412 aa20.61■□□□□ 0.89
SUCO-210ENST00000616058 KCNH8Q96L42 1107 aa20.6■□□□□ 0.89
SUCO-210ENST00000616058 RUSC2Q8N2Y8 1516 aa20.6■□□□□ 0.89
SUCO-210ENST00000616058 SMARCA2P51531 1590 aa20.6■□□□□ 0.89
SUCO-210ENST00000616058 CCDC136Q96JN2 1154 aa20.59■□□□□ 0.89
SUCO-210ENST00000616058 RGL3Q3MIN7 710 aa20.57■□□□□ 0.88
SUCO-210ENST00000616058 NPM1P06748 294 aaKnown RBP eCLIP20.56■□□□□ 0.88
SUCO-210ENST00000616058 NEFMP07197 916 aa20.56■□□□□ 0.88
SUCO-210ENST00000616058 ZBTB47Q9UFB7 747 aaPredicted RBP20.53■□□□□ 0.88
SUCO-210ENST00000616058 RAPGEF2Q9Y4G8 1499 aa20.52■□□□□ 0.88
SUCO-210ENST00000616058 SMARCA4P51532 1647 aa20.51■□□□□ 0.87
SUCO-210ENST00000616058 SLC24A1O60721 1099 aa20.5■□□□□ 0.87
SUCO-210ENST00000616058 SETD5Q9C0A6 1442 aa20.49■□□□□ 0.87
SUCO-210ENST00000616058 STAG3Q9UJ98 1225 aa20.48■□□□□ 0.87
SUCO-210ENST00000616058 SUPT16HQ9Y5B9 1047 aaKnown RBP20.48■□□□□ 0.87
SUCO-210ENST00000616058 EIF4G1Q04637 1599 aaKnown RBP20.48■□□□□ 0.87
SUCO-210ENST00000616058 ATAD2BQ9ULI0 1458 aa20.48■□□□□ 0.87
SUCO-210ENST00000616058 WDR43Q15061 677 aaKnown RBP eCLIP20.47■□□□□ 0.87
SUCO-210ENST00000616058 RAB3GAP2Q9H2M9 1393 aa20.45■□□□□ 0.86
SUCO-210ENST00000616058 TDRD9Q8NDG6 1382 aaKnown RBP20.44■□□□□ 0.86
SUCO-210ENST00000616058 CARD11Q9BXL7 1154 aa20.43■□□□□ 0.86
SUCO-210ENST00000616058 SENP3Q9H4L4 574 aaPredicted RBP20.43■□□□□ 0.86
SUCO-210ENST00000616058 ARHGAP35Q9NRY4 1499 aa20.41■□□□□ 0.86
SUCO-210ENST00000616058 ESF1Q9H501 851 aaKnown RBP20.41■□□□□ 0.86
SUCO-210ENST00000616058 TIMELESSQ9UNS1 1208 aa20.37■□□□□ 0.85
SUCO-210ENST00000616058 FOXD1Q16676 465 aa20.37■□□□□ 0.85
SUCO-210ENST00000616058 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
SUCO-210ENST00000616058 ERCC6Q03468 1493 aa20.35■□□□□ 0.85
SUCO-210ENST00000616058 NBR1Q14596 966 aa20.34■□□□□ 0.85
SUCO-210ENST00000616058 CADPSQ9ULU8 1353 aa20.34■□□□□ 0.85
SUCO-210ENST00000616058 FHOD3Q2V2M9 1422 aa20.32■□□□□ 0.84
SUCO-210ENST00000616058 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.32■□□□□ 0.84
SUCO-210ENST00000616058 HSPA5P11021 654 aaKnown RBP20.3■□□□□ 0.84
SUCO-210ENST00000616058 FMN1Q68DA7 1419 aa20.27■□□□□ 0.84
SUCO-210ENST00000616058 DCAF11Q8TEB1 546 aa20.26■□□□□ 0.83
SUCO-210ENST00000616058 DHX57Q6P158 1386 aaKnown RBP20.24■□□□□ 0.83
SUCO-210ENST00000616058 PPP1R15AO75807 674 aaPredicted RBP20.24■□□□□ 0.83
SUCO-210ENST00000616058 PDS5BQ9NTI5 1447 aa20.23■□□□□ 0.83
SUCO-210ENST00000616058 KNSTRNQ9Y448 316 aa20.23■□□□□ 0.83
SUCO-210ENST00000616058 CCER2I3L3R5 266 aa20.23■□□□□ 0.83
SUCO-210ENST00000616058 UPF2Q9HAU5 1272 aaKnown RBP20.21■□□□□ 0.83
SUCO-210ENST00000616058 MPHOSPH9Q99550 1183 aa20.21■□□□□ 0.83
SUCO-210ENST00000616058 PKD2Q13563 968 aa20.2■□□□□ 0.82
SUCO-210ENST00000616058 CC2D1BQ5T0F9 858 aaKnown RBP20.19■□□□□ 0.82
SUCO-210ENST00000616058 B4GALNT3Q6L9W6 998 aa20.17■□□□□ 0.82
SUCO-210ENST00000616058 PPP4R2Q9NY27 417 aa20.17■□□□□ 0.82
SUCO-210ENST00000616058 CDCA8Q53HL2 280 aa20.14■□□□□ 0.81
SUCO-210ENST00000616058 HSP90AA1P07900 732 aaKnown RBP20.14■□□□□ 0.81
SUCO-210ENST00000616058 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
SUCO-210ENST00000616058 NEUROD2Q15784 382 aa20.1■□□□□ 0.81
SUCO-210ENST00000616058 FANCD2Q9BXW9 1451 aa20.08■□□□□ 0.8
SUCO-210ENST00000616058 ANP32EQ9BTT0 268 aa20.08■□□□□ 0.8
SUCO-210ENST00000616058 IGF1RP08069 1367 aa20.08■□□□□ 0.8
SUCO-210ENST00000616058 TNNT2P45379 298 aaPredicted RBP20.07■□□□□ 0.8
SUCO-210ENST00000616058 NUP155O75694 1391 aa20.05■□□□□ 0.8
SUCO-210ENST00000616058 CARMIL2Q6F5E8 1435 aa20.04■□□□□ 0.8
SUCO-210ENST00000616058 TMF1P82094 1093 aa20.04■□□□□ 0.8
SUCO-210ENST00000616058 CFAP53Q96M91 514 aa20.02■□□□□ 0.8
SUCO-210ENST00000616058 KIF21BO75037 1637 aa20.02■□□□□ 0.8
SUCO-210ENST00000616058 ARXQ96QS3 562 aa20.01■□□□□ 0.79
SUCO-210ENST00000616058 FGD5Q6ZNL6 1462 aa20.01■□□□□ 0.79
SUCO-210ENST00000616058 PPM1GO15355 546 aaPredicted RBP20.01■□□□□ 0.79
SUCO-210ENST00000616058 ANKRD30AQ9BXX3 1397 aa19.98■□□□□ 0.79
SUCO-210ENST00000616058 HNRNPMP52272 730 aaKnown RBP eCLIP19.98■□□□□ 0.793e-6■■■■□ 24
SUCO-210ENST00000616058 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
SUCO-210ENST00000616058 RBM19Q9Y4C8 960 aaKnown RBP19.96■□□□□ 0.79
SUCO-210ENST00000616058 RGS3P49796 1198 aa19.95■□□□□ 0.78
SUCO-210ENST00000616058 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
SUCO-210ENST00000616058 PLEKHG5O94827 1062 aa19.94■□□□□ 0.78
SUCO-210ENST00000616058 FRAT1Q92837 279 aaPredicted RBP19.94■□□□□ 0.78
SUCO-210ENST00000616058 ROCK2O75116 1388 aaKnown RBP19.93■□□□□ 0.78
SUCO-210ENST00000616058 CCDC18Q5T9S5 1454 aa19.93■□□□□ 0.78
SUCO-210ENST00000616058 JPH4Q96JJ6 628 aa19.92■□□□□ 0.78
SUCO-210ENST00000616058 PHLDB1Q86UU1 1377 aa19.91■□□□□ 0.78
SUCO-210ENST00000616058 DDRGK1Q96HY6 314 aa19.91■□□□□ 0.78
SUCO-210ENST00000616058 POGKQ9P215 609 aa19.91■□□□□ 0.78
SUCO-210ENST00000616058 NCAPD3P42695 1498 aa19.91■□□□□ 0.78
SUCO-210ENST00000616058 MYH16Q9H6N6 1097 aa19.9■□□□□ 0.78
SUCO-210ENST00000616058 KANK1Q14678 1352 aa19.89■□□□□ 0.77
SUCO-210ENST00000616058 TSHZ2Q9NRE2 1034 aa19.89■□□□□ 0.77
SUCO-210ENST00000616058 KTN1Q86UP2 1357 aaKnown RBP19.88■□□□□ 0.77
SUCO-210ENST00000616058 GGT6Q6P531 493 aa19.88■□□□□ 0.77
SUCO-210ENST00000616058 ARAP1Q96P48 1450 aa19.88■□□□□ 0.77
SUCO-210ENST00000616058 FTSJ3Q8IY81 847 aaKnown RBP19.88■□□□□ 0.77
SUCO-210ENST00000616058 EIF5BO60841 1220 aaKnown RBP19.88■□□□□ 0.77
SUCO-210ENST00000616058 SAFB2Q14151 953 aaKnown RBP eCLIP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms