RNA–Protein interactions for RNA: ENST00000615951.4

CDK11B-206, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,227 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-206ENST00000615951 ACIN1Q9UKV3 1341 aaKnown RBP28.35■■■□□ 2.13
CDK11B-206ENST00000615951 FHAD1B1AJZ9 1412 aa28.32■■■□□ 2.12
CDK11B-206ENST00000615951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.32■■■□□ 2.12
CDK11B-206ENST00000615951 CCER1Q8TC90 406 aaPredicted RBP28.32■■■□□ 2.12
CDK11B-206ENST00000615951 WDR62O43379 1518 aa28.3■■■□□ 2.12
CDK11B-206ENST00000615951 PBRM1Q86U86 1689 aa28.27■■■□□ 2.12
CDK11B-206ENST00000615951 TIAM1Q13009 1591 aa28.26■■■□□ 2.11
CDK11B-206ENST00000615951 KANK4Q5T7N3 995 aaPredicted RBP28.25■■■□□ 2.11
CDK11B-206ENST00000615951 IFT140Q96RY7 1462 aa28.22■■■□□ 2.11
CDK11B-206ENST00000615951 AQRO60306 1485 aaKnown RBP eCLIP28.21■■■□□ 2.114e-7■■■■■ 29.4
CDK11B-206ENST00000615951 RRBP1Q9P2E9 1410 aaKnown RBP28.2■■■□□ 2.11
CDK11B-206ENST00000615951 CFAP43Q8NDM7 1665 aa28.18■■■□□ 2.1
CDK11B-206ENST00000615951 PCF11O94913 1555 aaKnown RBP28.17■■■□□ 2.1
CDK11B-206ENST00000615951 SAMD9Q5K651 1589 aa28.17■■■□□ 2.1
CDK11B-206ENST00000615951 FYCO1Q9BQS8 1478 aa28.16■■■□□ 2.1
CDK11B-206ENST00000615951 ADAMTS12P58397 1594 aa28.15■■■□□ 2.1
CDK11B-206ENST00000615951 GRIN2BQ13224 1484 aa28.14■■■□□ 2.1
CDK11B-206ENST00000615951 FHOD3Q2V2M9 1422 aa28.13■■■□□ 2.09
CDK11B-206ENST00000615951 CASKIN1Q8WXD9 1431 aa28.13■■■□□ 2.09
CDK11B-206ENST00000615951 NEUROD1Q13562 356 aa28.12■■■□□ 2.09
CDK11B-206ENST00000615951 HNRNPUL2Q1KMD3 747 aaKnown RBP28.12■■■□□ 2.09
CDK11B-206ENST00000615951 LRRC9Q6ZRR7 1453 aa28.11■■■□□ 2.09
CDK11B-206ENST00000615951 FMN1Q68DA7 1419 aa28.1■■■□□ 2.09
CDK11B-206ENST00000615951 GTF3C3Q9Y5Q9 886 aa28.09■■■□□ 2.09
CDK11B-206ENST00000615951 THOC2Q8NI27 1593 aaKnown RBP28.07■■■□□ 2.08
CDK11B-206ENST00000615951 ERCC6Q03468 1493 aa28.07■■■□□ 2.08
CDK11B-206ENST00000615951 P3H3Q8IVL6 736 aa28.03■■■□□ 2.08
CDK11B-206ENST00000615951 CCNB3Q8WWL7 1395 aa28.03■■■□□ 2.08
CDK11B-206ENST00000615951 BCL11AQ9H165 835 aa28.01■■■□□ 2.07
CDK11B-206ENST00000615951 SNAPC4Q5SXM2 1469 aa28.01■■■□□ 2.07
CDK11B-206ENST00000615951 ZNF608Q9ULD9 1512 aaPredicted RBP28■■■□□ 2.07
CDK11B-206ENST00000615951 IQGAP2Q13576 1575 aa27.97■■■□□ 2.07
CDK11B-206ENST00000615951 EIF4G3O43432 1585 aaKnown RBP27.95■■■□□ 2.06
CDK11B-206ENST00000615951 CENPBP07199 599 aaPredicted RBP27.94■■■□□ 2.06
CDK11B-206ENST00000615951 UGGT2Q9NYU1 1516 aa27.87■■■□□ 2.05
CDK11B-206ENST00000615951 PHLDB1Q86UU1 1377 aa27.86■■■□□ 2.05
CDK11B-206ENST00000615951 MAGI1Q96QZ7 1491 aaPredicted RBP27.85■■■□□ 2.05
CDK11B-206ENST00000615951 CLSPNQ9HAW4 1339 aa27.84■■■□□ 2.05
CDK11B-206ENST00000615951 KIAA0586Q9BVV6 1533 aa27.82■■■□□ 2.04
CDK11B-206ENST00000615951 ATP1B4Q9UN42 357 aaPredicted RBP27.82■■■□□ 2.04
CDK11B-206ENST00000615951 LRRIQ1Q96JM4 1722 aa27.81■■■□□ 2.04
CDK11B-206ENST00000615951 GRIN2AQ12879 1464 aa27.81■■■□□ 2.04
CDK11B-206ENST00000615951 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.8■■■□□ 2.04
CDK11B-206ENST00000615951 CCDC18Q5T9S5 1454 aa27.77■■■□□ 2.04
CDK11B-206ENST00000615951 HECW1Q76N89 1606 aa27.75■■■□□ 2.03
CDK11B-206ENST00000615951 PRKCSHP14314 528 aaPredicted RBP27.75■■■□□ 2.03
CDK11B-206ENST00000615951 DHX57Q6P158 1386 aaKnown RBP27.74■■■□□ 2.03
CDK11B-206ENST00000615951 EHBP1L1Q8N3D4 1523 aa27.73■■■□□ 2.03
CDK11B-206ENST00000615951 SYNJ2O15056 1496 aa27.72■■■□□ 2.03
CDK11B-206ENST00000615951 MTUS2Q5JR59 1369 aa27.71■■■□□ 2.03
CDK11B-206ENST00000615951 KIAA0556O60303 1618 aa27.68■■■□□ 2.02
CDK11B-206ENST00000615951 SUPT6HQ7KZ85 1726 aaKnown RBP27.67■■■□□ 2.02
CDK11B-206ENST00000615951 DISP1Q96F81 1524 aa27.65■■■□□ 2.02
CDK11B-206ENST00000615951 FGD6Q6ZV73 1430 aa27.65■■■□□ 2.02
CDK11B-206ENST00000615951 ARHGEF11O15085 1522 aa27.62■■■□□ 2.01
CDK11B-206ENST00000615951 NCOA2Q15596 1464 aa27.61■■■□□ 2.01
CDK11B-206ENST00000615951 CEP170Q5SW79 1584 aa27.61■■■□□ 2.01
CDK11B-206ENST00000615951 SETD5Q9C0A6 1442 aa27.61■■■□□ 2.01
CDK11B-206ENST00000615951 EPRSP07814 1512 aaKnown RBP27.61■■■□□ 2.01
CDK11B-206ENST00000615951 NUP160Q12769 1436 aa27.59■■■□□ 2.01
CDK11B-206ENST00000615951 FAM50AQ14320 339 aaKnown RBP27.59■■■□□ 2.01
CDK11B-206ENST00000615951 RAB3GAP2Q9H2M9 1393 aa27.58■■■□□ 2.01
CDK11B-206ENST00000615951 MYOM3Q5VTT5 1437 aa27.58■■■□□ 2.01
CDK11B-206ENST00000615951 ITGAEP38570 1179 aa27.57■■■□□ 2
CDK11B-206ENST00000615951 CHMP7Q8WUX9 453 aaPredicted RBP27.57■■■□□ 2
CDK11B-206ENST00000615951 MAGI3Q5TCQ9 1506 aa27.56■■■□□ 2
CDK11B-206ENST00000615951 RAPGEF6Q8TEU7 1601 aa27.49■■□□□ 1.99
CDK11B-206ENST00000615951 ZNF316A6NFI3 1004 aaPredicted RBP27.48■■□□□ 1.99
CDK11B-206ENST00000615951 CDK13Q14004 1512 aaKnown RBP27.47■■□□□ 1.99
CDK11B-206ENST00000615951 TCOF1Q13428 1488 aaKnown RBP27.45■■□□□ 1.99
CDK11B-206ENST00000615951 PTPN23Q9H3S7 1636 aa27.45■■□□□ 1.98
CDK11B-206ENST00000615951 CARMIL2Q6F5E8 1435 aa27.43■■□□□ 1.98
CDK11B-206ENST00000615951 NUP153P49790 1475 aaKnown RBP27.43■■□□□ 1.98
CDK11B-206ENST00000615951 MAPKBP1O60336 1514 aa27.4■■□□□ 1.98
CDK11B-206ENST00000615951 MIA2Q96PC5 1412 aa27.39■■□□□ 1.98
CDK11B-206ENST00000615951 FBLN2P98095 1184 aa27.37■■□□□ 1.97
CDK11B-206ENST00000615951 ANP32EQ9BTT0 268 aa27.37■■□□□ 1.97
CDK11B-206ENST00000615951 HFM1A2PYH4 1435 aa27.36■■□□□ 1.97
CDK11B-206ENST00000615951 DIEXFQ68CQ4 756 aaKnown RBP27.36■■□□□ 1.97
CDK11B-206ENST00000615951 JPH4Q96JJ6 628 aa27.36■■□□□ 1.97
CDK11B-206ENST00000615951 PTPRKQ15262 1439 aa27.33■■□□□ 1.97
CDK11B-206ENST00000615951 CDK11AQ9UQ88 783 aaPredicted RBP27.3■■□□□ 1.96
CDK11B-206ENST00000615951 ERICH6Q7L0X2 663 aa27.29■■□□□ 1.96
CDK11B-206ENST00000615951 AKNAQ7Z591 1439 aa27.27■■□□□ 1.96
CDK11B-206ENST00000615951 NAIPQ13075 1403 aa27.25■■□□□ 1.95
CDK11B-206ENST00000615951 ABCA8O94911 1581 aa27.25■■□□□ 1.95
CDK11B-206ENST00000615951 PLB1Q6P1J6 1458 aa27.25■■□□□ 1.95
CDK11B-206ENST00000615951 TROQ12816 1431 aaPredicted RBP27.24■■□□□ 1.95
CDK11B-206ENST00000615951 ADCY10Q96PN6 1610 aa27.23■■□□□ 1.95
CDK11B-206ENST00000615951 CHD1O14646 1710 aa27.22■■□□□ 1.95
CDK11B-206ENST00000615951 GCC2Q8IWJ2 1684 aa27.22■■□□□ 1.95
CDK11B-206ENST00000615951 UACAQ9BZF9 1416 aa27.2■■□□□ 1.94
CDK11B-206ENST00000615951 TIMELESSQ9UNS1 1208 aa27.18■■□□□ 1.94
CDK11B-206ENST00000615951 ARID3CA6NKF2 412 aa27.17■■□□□ 1.94
CDK11B-206ENST00000615951 ITSN2Q9NZM3 1697 aa27.15■■□□□ 1.94
CDK11B-206ENST00000615951 SHROOM2Q13796 1616 aa27.14■■□□□ 1.94
CDK11B-206ENST00000615951 PRG4Q92954 1404 aaPredicted RBP27.13■■□□□ 1.93
CDK11B-206ENST00000615951 DNMT1P26358 1616 aaKnown RBP27.13■■□□□ 1.93
CDK11B-206ENST00000615951 ROCK1Q13464 1354 aa27.09■■□□□ 1.93
CDK11B-206ENST00000615951 DAPK1P53355 1430 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms