RNA–Protein interactions for RNA: ENST00000615670.4

PRAG1-201, Transcript of PEAK1 related, kinase-activating pseudokinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRAG1, Length 4,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAG1-201ENST00000615670 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.46■■□□□ 1.19
PRAG1-201ENST00000615670 RRP7BPQ9NSQ0 103 aa22.45■■□□□ 1.18
PRAG1-201ENST00000615670 SMARCA2P51531 1590 aa22.43■■□□□ 1.18
PRAG1-201ENST00000615670 NPM2Q86SE8 214 aaKnown RBP22.43■■□□□ 1.18
PRAG1-201ENST00000615670 CHMP7Q8WUX9 453 aaPredicted RBP22.42■■□□□ 1.18
PRAG1-201ENST00000615670 ABCC8Q09428 1581 aa22.41■■□□□ 1.18
PRAG1-201ENST00000615670 HIRIP3Q9BW71 556 aaPredicted RBP22.37■■□□□ 1.17
PRAG1-201ENST00000615670 CARMIL1Q5VZK9 1371 aa22.37■■□□□ 1.17
PRAG1-201ENST00000615670 UPF2Q9HAU5 1272 aaKnown RBP22.37■■□□□ 1.17
PRAG1-201ENST00000615670 WDR43Q15061 677 aaKnown RBP eCLIP22.36■■□□□ 1.17
PRAG1-201ENST00000615670 WIZO95785 1651 aa22.34■■□□□ 1.17
PRAG1-201ENST00000615670 CUX2O14529 1486 aa22.33■■□□□ 1.17
PRAG1-201ENST00000615670 PLEKHD1A6NEE1 506 aa22.33■■□□□ 1.17
PRAG1-201ENST00000615670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.32■■□□□ 1.169e-9■□□□□ 9.8
PRAG1-201ENST00000615670 KDM2AQ9Y2K7 1162 aa22.31■■□□□ 1.16
PRAG1-201ENST00000615670 NPM1P06748 294 aaKnown RBP eCLIP22.29■■□□□ 1.16
PRAG1-201ENST00000615670 SETD5Q9C0A6 1442 aa22.29■■□□□ 1.16
PRAG1-201ENST00000615670 CHGAP10645 457 aaKnown RBP22.27■■□□□ 1.16
PRAG1-201ENST00000615670 CFDP1Q9UEE9 299 aaPredicted RBP22.26■■□□□ 1.15
PRAG1-201ENST00000615670 CCER2I3L3R5 266 aa22.25■■□□□ 1.15
PRAG1-201ENST00000615670 SIN3AQ96ST3 1273 aa22.24■■□□□ 1.15
PRAG1-201ENST00000615670 SALL2Q9Y467 1007 aaPredicted RBP22.24■■□□□ 1.15
PRAG1-201ENST00000615670 ARHGAP35Q9NRY4 1499 aa22.22■■□□□ 1.15
PRAG1-201ENST00000615670 IRX6P78412 446 aaPredicted RBP22.2■■□□□ 1.14
PRAG1-201ENST00000615670 CDCA8Q53HL2 280 aa22.19■■□□□ 1.14
PRAG1-201ENST00000615670 SUPT16HQ9Y5B9 1047 aaKnown RBP22.17■■□□□ 1.14
PRAG1-201ENST00000615670 ESF1Q9H501 851 aaKnown RBP22.16■■□□□ 1.14
PRAG1-201ENST00000615670 STAG3Q9UJ98 1225 aa22.16■■□□□ 1.14
PRAG1-201ENST00000615670 PPP4R2Q9NY27 417 aa22.15■■□□□ 1.14
PRAG1-201ENST00000615670 SMARCA4P51532 1647 aa22.14■■□□□ 1.14
PRAG1-201ENST00000615670 DDRGK1Q96HY6 314 aa22.13■■□□□ 1.13
PRAG1-201ENST00000615670 ANP32BQ92688 251 aaKnown RBP22.13■■□□□ 1.13
PRAG1-201ENST00000615670 CARD11Q9BXL7 1154 aa22.12■■□□□ 1.13
PRAG1-201ENST00000615670 ANP32EQ9BTT0 268 aa22.12■■□□□ 1.13
PRAG1-201ENST00000615670 FMN1Q68DA7 1419 aa22.12■■□□□ 1.13
PRAG1-201ENST00000615670 KANK4Q5T7N3 995 aaPredicted RBP22.11■■□□□ 1.13
PRAG1-201ENST00000615670 HSP90AA1P07900 732 aaKnown RBP22.11■■□□□ 1.13
PRAG1-201ENST00000615670 RAB3GAP2Q9H2M9 1393 aa22.08■■□□□ 1.13
PRAG1-201ENST00000615670 SLC24A1O60721 1099 aa22.08■■□□□ 1.12
PRAG1-201ENST00000615670 NBR1Q14596 966 aa22.06■■□□□ 1.12
PRAG1-201ENST00000615670 BCL11AQ9H165 835 aa22.03■■□□□ 1.12
PRAG1-201ENST00000615670 KNSTRNQ9Y448 316 aa22.03■■□□□ 1.12
PRAG1-201ENST00000615670 ERICH6BQ5W0A0 696 aa22.02■■□□□ 1.12
PRAG1-201ENST00000615670 RAPGEF2Q9Y4G8 1499 aa22.01■■□□□ 1.11
PRAG1-201ENST00000615670 EIF4G1Q04637 1599 aaKnown RBP22.01■■□□□ 1.11
PRAG1-201ENST00000615670 ATAD2BQ9ULI0 1458 aa22.01■■□□□ 1.11
PRAG1-201ENST00000615670 RGL3Q3MIN7 710 aa21.99■■□□□ 1.11
PRAG1-201ENST00000615670 BECN1Q14457 450 aa21.97■■□□□ 1.11
PRAG1-201ENST00000615670 CFAP53Q96M91 514 aa21.97■■□□□ 1.11
PRAG1-201ENST00000615670 KCNH8Q96L42 1107 aa21.94■■□□□ 1.1
PRAG1-201ENST00000615670 PDS5BQ9NTI5 1447 aa21.94■■□□□ 1.1
PRAG1-201ENST00000615670 PPP1R15AO75807 674 aaPredicted RBP21.92■■□□□ 1.1
PRAG1-201ENST00000615670 HSPA5P11021 654 aaKnown RBP21.92■■□□□ 1.1
PRAG1-201ENST00000615670 CADPSQ9ULU8 1353 aa21.91■■□□□ 1.1
PRAG1-201ENST00000615670 PPM1GO15355 546 aaPredicted RBP21.91■■□□□ 1.1
PRAG1-201ENST00000615670 MYH16Q9H6N6 1097 aa21.91■■□□□ 1.1
PRAG1-201ENST00000615670 DHX57Q6P158 1386 aaKnown RBP21.89■■□□□ 1.09
PRAG1-201ENST00000615670 ERCC6Q03468 1493 aa21.87■■□□□ 1.09
PRAG1-201ENST00000615670 TMF1P82094 1093 aa21.86■■□□□ 1.09
PRAG1-201ENST00000615670 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
PRAG1-201ENST00000615670 EIF5BO60841 1220 aaKnown RBP21.85■■□□□ 1.09
PRAG1-201ENST00000615670 CARMIL2Q6F5E8 1435 aa21.84■■□□□ 1.09
PRAG1-201ENST00000615670 MPHOSPH9Q99550 1183 aa21.82■■□□□ 1.08
PRAG1-201ENST00000615670 DCAF11Q8TEB1 546 aa21.81■■□□□ 1.08
PRAG1-201ENST00000615670 NOP58Q9Y2X3 529 aaKnown RBP21.81■■□□□ 1.08
PRAG1-201ENST00000615670 FHOD3Q2V2M9 1422 aa21.77■■□□□ 1.08
PRAG1-201ENST00000615670 ANKRD30AQ9BXX3 1397 aa21.77■■□□□ 1.08
PRAG1-201ENST00000615670 KANK1Q14678 1352 aa21.76■■□□□ 1.07
PRAG1-201ENST00000615670 MS4A1P11836 297 aa21.76■■□□□ 1.07
PRAG1-201ENST00000615670 PKD2Q13563 968 aa21.76■■□□□ 1.07
PRAG1-201ENST00000615670 B4GALNT3Q6L9W6 998 aa21.75■■□□□ 1.07
PRAG1-201ENST00000615670 TDRD9Q8NDG6 1382 aaKnown RBP21.75■■□□□ 1.07
PRAG1-201ENST00000615670 NUDCQ9Y266 331 aa21.75■■□□□ 1.07
PRAG1-201ENST00000615670 CCDC18Q5T9S5 1454 aa21.74■■□□□ 1.07
PRAG1-201ENST00000615670 RALBP1Q15311 655 aa21.74■■□□□ 1.07
PRAG1-201ENST00000615670 KTN1Q86UP2 1357 aaKnown RBP21.73■■□□□ 1.07
PRAG1-201ENST00000615670 GLIPR1L2Q4G1C9 344 aa21.73■■□□□ 1.07
PRAG1-201ENST00000615670 RBM19Q9Y4C8 960 aaKnown RBP21.73■■□□□ 1.07
PRAG1-201ENST00000615670 CHMP4BQ9H444 224 aaKnown RBP21.72■■□□□ 1.07
PRAG1-201ENST00000615670 FTSJ3Q8IY81 847 aaKnown RBP21.7■■□□□ 1.07
PRAG1-201ENST00000615670 CC2D1BQ5T0F9 858 aaKnown RBP21.7■■□□□ 1.06
PRAG1-201ENST00000615670 ROCK2O75116 1388 aaKnown RBP21.7■■□□□ 1.06
PRAG1-201ENST00000615670 MAPK8IP3Q9UPT6 1336 aa21.69■■□□□ 1.06
PRAG1-201ENST00000615670 GOLGA6L22H0YM25 854 aa21.69■■□□□ 1.06
PRAG1-201ENST00000615670 KIF21BO75037 1637 aa21.68■■□□□ 1.06
PRAG1-201ENST00000615670 PNNQ9H307 717 aaKnown RBP21.66■■□□□ 1.06
PRAG1-201ENST00000615670 NUP155O75694 1391 aa21.65■■□□□ 1.06
PRAG1-201ENST00000615670 RSPH4AQ5TD94 716 aa21.63■■□□□ 1.05
PRAG1-201ENST00000615670 L3MBTL2Q969R5 705 aa21.63■■□□□ 1.05
PRAG1-201ENST00000615670 SENP3-EIF4A1A0A087X0R7 540 aa21.62■■□□□ 1.05
PRAG1-201ENST00000615670 FOXD1Q16676 465 aa21.61■■□□□ 1.05
PRAG1-201ENST00000615670 ARID4BQ4LE39 1312 aaPredicted RBP21.6■■□□□ 1.05
PRAG1-201ENST00000615670 FANCD2Q9BXW9 1451 aa21.6■■□□□ 1.05
PRAG1-201ENST00000615670 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
PRAG1-201ENST00000615670 TSHZ2Q9NRE2 1034 aa21.6■■□□□ 1.05
PRAG1-201ENST00000615670 CASC1Q6TDU7 716 aa21.59■■□□□ 1.05
PRAG1-201ENST00000615670 RGS3P49796 1198 aa21.58■■□□□ 1.04
PRAG1-201ENST00000615670 PDE3BQ13370 1112 aa21.57■■□□□ 1.04
PRAG1-201ENST00000615670 TCERG1O14776 1098 aaKnown RBP21.56■■□□□ 1.04
PRAG1-201ENST00000615670 NEUROD2Q15784 382 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms