RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 KIF21AQ7Z4S6 1674 aa21.99■■□□□ 1.11
CDKN1A-208ENST00000615513 CTTNBP2Q8WZ74 1663 aa21.99■■□□□ 1.11
CDKN1A-208ENST00000615513 GAPVD1Q14C86 1478 aa21.99■■□□□ 1.11
CDKN1A-208ENST00000615513 LRRC9Q6ZRR7 1453 aa21.97■■□□□ 1.11
CDKN1A-208ENST00000615513 AQRO60306 1485 aaKnown RBP eCLIP21.96■■□□□ 1.114e-7■■■■■ 34
CDKN1A-208ENST00000615513 TDRD9Q8NDG6 1382 aaKnown RBP21.95■■□□□ 1.1
CDKN1A-208ENST00000615513 PCF11O94913 1555 aaKnown RBP21.94■■□□□ 1.1
CDKN1A-208ENST00000615513 CFAP43Q8NDM7 1665 aa21.94■■□□□ 1.1
CDKN1A-208ENST00000615513 FYCO1Q9BQS8 1478 aa21.93■■□□□ 1.1
CDKN1A-208ENST00000615513 TARBP1Q13395 1621 aaKnown RBP21.91■■□□□ 1.1
CDKN1A-208ENST00000615513 FHOD3Q2V2M9 1422 aa21.91■■□□□ 1.1
CDKN1A-208ENST00000615513 CASKIN1Q8WXD9 1431 aa21.91■■□□□ 1.1
CDKN1A-208ENST00000615513 DHX57Q6P158 1386 aaKnown RBP21.89■■□□□ 1.1
CDKN1A-208ENST00000615513 ZNF316A6NFI3 1004 aaPredicted RBP21.89■■□□□ 1.09
CDKN1A-208ENST00000615513 DIEXFQ68CQ4 756 aaKnown RBP21.89■■□□□ 1.09
CDKN1A-208ENST00000615513 FMN1Q68DA7 1419 aa21.88■■□□□ 1.09
CDKN1A-208ENST00000615513 P3H3Q8IVL6 736 aa21.87■■□□□ 1.09
CDKN1A-208ENST00000615513 MRC2Q9UBG0 1479 aa21.85■■□□□ 1.09
CDKN1A-208ENST00000615513 SAMD9Q5K651 1589 aa21.84■■□□□ 1.09
CDKN1A-208ENST00000615513 PHLDB1Q86UU1 1377 aa21.82■■□□□ 1.08
CDKN1A-208ENST00000615513 SNAPC4Q5SXM2 1469 aa21.79■■□□□ 1.08
CDKN1A-208ENST00000615513 PBRM1Q86U86 1689 aa21.75■■□□□ 1.07
CDKN1A-208ENST00000615513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.75■■□□□ 1.07
CDKN1A-208ENST00000615513 ATP1B4Q9UN42 357 aaPredicted RBP21.74■■□□□ 1.07
CDKN1A-208ENST00000615513 THOC2Q8NI27 1593 aaKnown RBP21.73■■□□□ 1.07
CDKN1A-208ENST00000615513 ITGAEP38570 1179 aa21.7■■□□□ 1.06
CDKN1A-208ENST00000615513 ADAMTS12P58397 1594 aa21.7■■□□□ 1.06
CDKN1A-208ENST00000615513 GRIN2BQ13224 1484 aa21.7■■□□□ 1.06
CDKN1A-208ENST00000615513 IFT140Q96RY7 1462 aa21.7■■□□□ 1.06
CDKN1A-208ENST00000615513 RAB3GAP2Q9H2M9 1393 aa21.7■■□□□ 1.06
CDKN1A-208ENST00000615513 WDR62O43379 1518 aa21.7■■□□□ 1.06
CDKN1A-208ENST00000615513 SETD5Q9C0A6 1442 aa21.69■■□□□ 1.06
CDKN1A-208ENST00000615513 FAM50AQ14320 339 aaKnown RBP21.65■■□□□ 1.06
CDKN1A-208ENST00000615513 MTUS2Q5JR59 1369 aa21.64■■□□□ 1.05
CDKN1A-208ENST00000615513 IQGAP2Q13576 1575 aa21.63■■□□□ 1.05
CDKN1A-208ENST00000615513 SCAF1Q9H7N4 1312 aaKnown RBP21.63■■□□□ 1.05
CDKN1A-208ENST00000615513 PELP1Q8IZL8 1130 aaKnown RBP21.62■■□□□ 1.05
CDKN1A-208ENST00000615513 FGD6Q6ZV73 1430 aa21.61■■□□□ 1.05
CDKN1A-208ENST00000615513 LRRIQ1Q96JM4 1722 aa21.59■■□□□ 1.05
CDKN1A-208ENST00000615513 CCDC18Q5T9S5 1454 aa21.59■■□□□ 1.05
CDKN1A-208ENST00000615513 EHBP1L1Q8N3D4 1523 aa21.58■■□□□ 1.05
CDKN1A-208ENST00000615513 MAPKBP1O60336 1514 aa21.57■■□□□ 1.04
CDKN1A-208ENST00000615513 ZNF608Q9ULD9 1512 aaPredicted RBP21.56■■□□□ 1.04
CDKN1A-208ENST00000615513 UGGT2Q9NYU1 1516 aa21.56■■□□□ 1.04
CDKN1A-208ENST00000615513 NCOA2Q15596 1464 aa21.54■■□□□ 1.04
CDKN1A-208ENST00000615513 HECW1Q76N89 1606 aa21.54■■□□□ 1.04
CDKN1A-208ENST00000615513 SUPT6HQ7KZ85 1726 aaKnown RBP21.54■■□□□ 1.04
CDKN1A-208ENST00000615513 MYOM3Q5VTT5 1437 aa21.53■■□□□ 1.04
CDKN1A-208ENST00000615513 ARHGEF11O15085 1522 aa21.51■■□□□ 1.03
CDKN1A-208ENST00000615513 KIAA0586Q9BVV6 1533 aa21.5■■□□□ 1.03
CDKN1A-208ENST00000615513 CENPBP07199 599 aaPredicted RBP21.5■■□□□ 1.03
CDKN1A-208ENST00000615513 ACIN1Q9UKV3 1341 aaKnown RBP21.49■■□□□ 1.03
CDKN1A-208ENST00000615513 ERCC6Q03468 1493 aa21.49■■□□□ 1.03
CDKN1A-208ENST00000615513 EIF4G3O43432 1585 aaKnown RBP21.47■■□□□ 1.03
CDKN1A-208ENST00000615513 EPRSP07814 1512 aaKnown RBP21.46■■□□□ 1.03
CDKN1A-208ENST00000615513 GRIN2AQ12879 1464 aa21.45■■□□□ 1.02
CDKN1A-208ENST00000615513 MAGI3Q5TCQ9 1506 aa21.45■■□□□ 1.02
CDKN1A-208ENST00000615513 HFM1A2PYH4 1435 aa21.44■■□□□ 1.02
CDKN1A-208ENST00000615513 MAGI1Q96QZ7 1491 aaPredicted RBP21.43■■□□□ 1.02
CDKN1A-208ENST00000615513 TIMELESSQ9UNS1 1208 aa21.43■■□□□ 1.02
CDKN1A-208ENST00000615513 MIER1Q8N108 512 aa21.41■■□□□ 1.02
CDKN1A-208ENST00000615513 NEUROD1Q13562 356 aa21.4■■□□□ 1.02
CDKN1A-208ENST00000615513 KIAA0556O60303 1618 aa21.4■■□□□ 1.02
CDKN1A-208ENST00000615513 TCOF1Q13428 1488 aaKnown RBP21.4■■□□□ 1.02
CDKN1A-208ENST00000615513 PTPRKQ15262 1439 aa21.4■■□□□ 1.02
CDKN1A-208ENST00000615513 PTPN23Q9H3S7 1636 aa21.4■■□□□ 1.02
CDKN1A-208ENST00000615513 DISP1Q96F81 1524 aa21.39■■□□□ 1.02
CDKN1A-208ENST00000615513 MIA2Q96PC5 1412 aa21.36■■□□□ 1.01
CDKN1A-208ENST00000615513 SYNJ2O15056 1496 aa21.35■■□□□ 1.01
CDKN1A-208ENST00000615513 NAIPQ13075 1403 aa21.34■■□□□ 1.01
CDKN1A-208ENST00000615513 UACAQ9BZF9 1416 aa21.34■■□□□ 1.01
CDKN1A-208ENST00000615513 CDK13Q14004 1512 aaKnown RBP21.34■■□□□ 1.01
CDKN1A-208ENST00000615513 AKNAQ7Z591 1439 aa21.3■■□□□ 1
CDKN1A-208ENST00000615513 SIN3AQ96ST3 1273 aa21.3■■□□□ 1
CDKN1A-208ENST00000615513 CHMP7Q8WUX9 453 aaPredicted RBP21.28■■□□□ 1
CDKN1A-208ENST00000615513 RAPGEF6Q8TEU7 1601 aa21.28■■□□□ 1
CDKN1A-208ENST00000615513 NUP153P49790 1475 aaKnown RBP21.27■■□□□ 1
CDKN1A-208ENST00000615513 CEP170Q5SW79 1584 aa21.27■■□□□ 1
CDKN1A-208ENST00000615513 NUP160Q12769 1436 aa21.25■□□□□ 0.99
CDKN1A-208ENST00000615513 GCC2Q8IWJ2 1684 aa21.23■□□□□ 0.99
CDKN1A-208ENST00000615513 CDK11AQ9UQ88 783 aaPredicted RBP21.23■□□□□ 0.99
CDKN1A-208ENST00000615513 CARMIL2Q6F5E8 1435 aa21.21■□□□□ 0.99
CDKN1A-208ENST00000615513 PPP1R15AO75807 674 aaPredicted RBP21.2■□□□□ 0.98
CDKN1A-208ENST00000615513 YTHDC1Q96MU7 727 aaKnown RBP21.17■□□□□ 0.98
CDKN1A-208ENST00000615513 ARID3CA6NKF2 412 aa21.16■□□□□ 0.98
CDKN1A-208ENST00000615513 TONSLQ96HA7 1378 aa21.15■□□□□ 0.98
CDKN1A-208ENST00000615513 TROQ12816 1431 aaPredicted RBP21.15■□□□□ 0.98
CDKN1A-208ENST00000615513 JPH4Q96JJ6 628 aa21.15■□□□□ 0.98
CDKN1A-208ENST00000615513 ROCK1Q13464 1354 aa21.15■□□□□ 0.98
CDKN1A-208ENST00000615513 GTF3C3Q9Y5Q9 886 aa21.14■□□□□ 0.98
CDKN1A-208ENST00000615513 FBLN2P98095 1184 aa21.14■□□□□ 0.97
CDKN1A-208ENST00000615513 RRP7BPQ9NSQ0 103 aa21.14■□□□□ 0.97
CDKN1A-208ENST00000615513 CHIC2Q9UKJ5 165 aa21.12■□□□□ 0.97
CDKN1A-208ENST00000615513 DAPK1P53355 1430 aa21.12■□□□□ 0.97
CDKN1A-208ENST00000615513 PLB1Q6P1J6 1458 aa21.11■□□□□ 0.97
CDKN1A-208ENST00000615513 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
CDKN1A-208ENST00000615513 ABCC5O15440 1437 aa21.08■□□□□ 0.97
CDKN1A-208ENST00000615513 ADCY10Q96PN6 1610 aa21.08■□□□□ 0.97
CDKN1A-208ENST00000615513 PRG4Q92954 1404 aaPredicted RBP21.08■□□□□ 0.96
CDKN1A-208ENST00000615513 ITSN2Q9NZM3 1697 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms