RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 RAD54L2Q9Y4B4 1467 aa13.55□□□□□ -0.24
FAM228B-209ENST00000615135 SOGA1O94964 1423 aa13.54□□□□□ -0.24
FAM228B-209ENST00000615135 SYNJ2O15056 1496 aa13.53□□□□□ -0.24
FAM228B-209ENST00000615135 KDM4FA0A1W2PPD8 638 aa13.51□□□□□ -0.25
FAM228B-209ENST00000615135 GRIN2BQ13224 1484 aa13.49□□□□□ -0.25
FAM228B-209ENST00000615135 KIF13AQ9H1H9 1805 aa13.48□□□□□ -0.25
FAM228B-209ENST00000615135 HOXD11P31277 338 aaPredicted RBP13.43□□□□□ -0.26
FAM228B-209ENST00000615135 ERCC6L2Q5T890 1561 aa13.43□□□□□ -0.26
FAM228B-209ENST00000615135 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
FAM228B-209ENST00000615135 CEP170Q5SW79 1584 aa13.37□□□□□ -0.27
FAM228B-209ENST00000615135 ABCC10Q5T3U5 1492 aa13.36□□□□□ -0.27
FAM228B-209ENST00000615135 PBRM1Q86U86 1689 aa13.34□□□□□ -0.27
FAM228B-209ENST00000615135 NUP160Q12769 1436 aa13.34□□□□□ -0.27
FAM228B-209ENST00000615135 FAM69CQ0P6D2 419 aa13.34□□□□□ -0.27
FAM228B-209ENST00000615135 SHROOM2Q13796 1616 aa13.34□□□□□ -0.27
FAM228B-209ENST00000615135 GRIN2AQ12879 1464 aa13.32□□□□□ -0.28
FAM228B-209ENST00000615135 CUX1P39880 1505 aa13.32□□□□□ -0.28
FAM228B-209ENST00000615135 KDM6BO15054 1643 aa13.29□□□□□ -0.28
FAM228B-209ENST00000615135 FOXD4L1Q9NU39 408 aa13.29□□□□□ -0.28
FAM228B-209ENST00000615135 MAPKBP1O60336 1514 aa13.29□□□□□ -0.28
FAM228B-209ENST00000615135 ABCA5Q8WWZ7 1642 aa13.28□□□□□ -0.28
FAM228B-209ENST00000615135 ABCA10Q8WWZ4 1543 aa13.27□□□□□ -0.29
FAM228B-209ENST00000615135 DIP2BQ9P265 1576 aa13.27□□□□□ -0.29
FAM228B-209ENST00000615135 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
FAM228B-209ENST00000615135 FBXO41Q8TF61 875 aa13.22□□□□□ -0.29
FAM228B-209ENST00000615135 HECW2Q9P2P5 1572 aa13.22□□□□□ -0.29
FAM228B-209ENST00000615135 PRG4Q92954 1404 aaPredicted RBP13.22□□□□□ -0.29
FAM228B-209ENST00000615135 NPM1P06748 294 aaKnown RBP eCLIP13.21□□□□□ -0.29
FAM228B-209ENST00000615135 ADAMTS12P58397 1594 aa13.2□□□□□ -0.3
FAM228B-209ENST00000615135 ADGRL1O94910 1474 aa13.2□□□□□ -0.3
FAM228B-209ENST00000615135 JPH4Q96JJ6 628 aa13.18□□□□□ -0.3
FAM228B-209ENST00000615135 FHAD1B1AJZ9 1412 aa13.18□□□□□ -0.3
FAM228B-209ENST00000615135 DCAF8L1A6NGE4 600 aa13.15□□□□□ -0.3
FAM228B-209ENST00000615135 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
FAM228B-209ENST00000615135 ADCY10Q96PN6 1610 aa13.14□□□□□ -0.31
FAM228B-209ENST00000615135 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.31
FAM228B-209ENST00000615135 WRNQ14191 1432 aaPredicted RBP eCLIP13.06□□□□□ -0.32
FAM228B-209ENST00000615135 PPRC1Q5VV67 1664 aaKnown RBP13.06□□□□□ -0.32
FAM228B-209ENST00000615135 COL17A1Q9UMD9 1497 aaPredicted RBP13.05□□□□□ -0.32
FAM228B-209ENST00000615135 GLI2P10070 1586 aa13.05□□□□□ -0.32
FAM228B-209ENST00000615135 RUSC2Q8N2Y8 1516 aa13.03□□□□□ -0.32
FAM228B-209ENST00000615135 LMTK3Q96Q04 1460 aa13.01□□□□□ -0.33
FAM228B-209ENST00000615135 PLB1Q6P1J6 1458 aa12.98□□□□□ -0.33
FAM228B-209ENST00000615135 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
FAM228B-209ENST00000615135 ABCC2Q92887 1545 aa12.96□□□□□ -0.33
FAM228B-209ENST00000615135 ASXL2Q76L83 1435 aa12.96□□□□□ -0.34
FAM228B-209ENST00000615135 KIAA0586Q9BVV6 1533 aa12.95□□□□□ -0.34
FAM228B-209ENST00000615135 SOCS7O14512 581 aa12.95□□□□□ -0.34
FAM228B-209ENST00000615135 BIVM-ERCC5R4GMW8 1640 aa12.93□□□□□ -0.34
FAM228B-209ENST00000615135 PTPRGP23470 1445 aa12.93□□□□□ -0.34
FAM228B-209ENST00000615135 TEX14Q8IWB6 1497 aa12.92□□□□□ -0.34
FAM228B-209ENST00000615135 MAP3K4Q9Y6R4 1608 aa12.91□□□□□ -0.34
FAM228B-209ENST00000615135 UHRF1BP1LA0JNW5 1464 aa12.9□□□□□ -0.34
FAM228B-209ENST00000615135 EPRSP07814 1512 aaKnown RBP12.89□□□□□ -0.35
FAM228B-209ENST00000615135 ILDR2Q71H61 639 aa12.89□□□□□ -0.35
FAM228B-209ENST00000615135 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
FAM228B-209ENST00000615135 TNIKQ9UKE5 1360 aa12.86□□□□□ -0.35
FAM228B-209ENST00000615135 CUL7Q14999 1698 aa12.83□□□□□ -0.35
FAM228B-209ENST00000615135 KDM5BQ9UGL1 1544 aa12.83□□□□□ -0.35
FAM228B-209ENST00000615135 UACAQ9BZF9 1416 aa12.82□□□□□ -0.36
FAM228B-209ENST00000615135 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.82□□□□□ -0.36
FAM228B-209ENST00000615135 CARMIL2Q6F5E8 1435 aa12.8□□□□□ -0.36
FAM228B-209ENST00000615135 PTPRMP28827 1452 aa12.8□□□□□ -0.36
FAM228B-209ENST00000615135 IGF1RP08069 1367 aa12.79□□□□□ -0.36
FAM228B-209ENST00000615135 DISP3Q9P2K9 1392 aa12.79□□□□□ -0.36
FAM228B-209ENST00000615135 MAGI3Q5TCQ9 1506 aa12.78□□□□□ -0.36
FAM228B-209ENST00000615135 ADAMTSL3P82987 1691 aa12.77□□□□□ -0.36
FAM228B-209ENST00000615135 PCF11O94913 1555 aaKnown RBP12.77□□□□□ -0.37
FAM228B-209ENST00000615135 CERKQ8TCT0 537 aa12.76□□□□□ -0.37
FAM228B-209ENST00000615135 KIF21BO75037 1637 aa12.76□□□□□ -0.37
FAM228B-209ENST00000615135 TTBK1Q5TCY1 1321 aaPredicted RBP12.75□□□□□ -0.37
FAM228B-209ENST00000615135 ZCCHC11Q5TAX3 1644 aaKnown RBP12.73□□□□□ -0.37
FAM228B-209ENST00000615135 ATF5Q9Y2D1 282 aaPredicted RBP12.73□□□□□ -0.37
FAM228B-209ENST00000615135 WDR7Q9Y4E6 1490 aa12.72□□□□□ -0.37
FAM228B-209ENST00000615135 CD109Q6YHK3 1445 aa12.72□□□□□ -0.37
FAM228B-209ENST00000615135 U3KPZ7 1027 aaPredicted RBP12.72□□□□□ -0.37
FAM228B-209ENST00000615135 ARAP3Q8WWN8 1544 aa12.72□□□□□ -0.37
FAM228B-209ENST00000615135 DISP1Q96F81 1524 aa12.71□□□□□ -0.38
FAM228B-209ENST00000615135 CFAP43Q8NDM7 1665 aa12.7□□□□□ -0.38
FAM228B-209ENST00000615135 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
FAM228B-209ENST00000615135 IQGAP2Q13576 1575 aa12.68□□□□□ -0.38
FAM228B-209ENST00000615135 KIF27Q86VH2 1401 aa12.66□□□□□ -0.38
FAM228B-209ENST00000615135 SUPT5HO00267 1087 aaKnown RBP12.65□□□□□ -0.38
FAM228B-209ENST00000615135 CARMIL1Q5VZK9 1371 aa12.65□□□□□ -0.38
FAM228B-209ENST00000615135 BCORL1Q5H9F3 1711 aa12.65□□□□□ -0.38
FAM228B-209ENST00000615135 CACNB1Q02641 598 aaPredicted RBP12.64□□□□□ -0.39
FAM228B-209ENST00000615135 PHLDB1Q86UU1 1377 aa12.64□□□□□ -0.39
FAM228B-209ENST00000615135 SPATA31D1Q6ZQQ2 1576 aa12.63□□□□□ -0.39
FAM228B-209ENST00000615135 UGGT2Q9NYU1 1516 aa12.62□□□□□ -0.39
FAM228B-209ENST00000615135 MADDQ8WXG6 1647 aa12.62□□□□□ -0.39
FAM228B-209ENST00000615135 HSPA2P54652 639 aa12.62□□□□□ -0.39
FAM228B-209ENST00000615135 RNF39Q9H2S5 420 aa12.62□□□□□ -0.39
FAM228B-209ENST00000615135 KCNH8Q96L42 1107 aa12.6□□□□□ -0.39
FAM228B-209ENST00000615135 KIAA0556O60303 1618 aa12.57□□□□□ -0.4
FAM228B-209ENST00000615135 RAPGEF3O95398 923 aa12.55□□□□□ -0.4
FAM228B-209ENST00000615135 RIMS1Q86UR5 1692 aaKnown RBP12.54□□□□□ -0.4
FAM228B-209ENST00000615135 ABCA8O94911 1581 aa12.54□□□□□ -0.4
FAM228B-209ENST00000615135 ARID4BQ4LE39 1312 aaPredicted RBP12.53□□□□□ -0.4
FAM228B-209ENST00000615135 NEO1Q92859 1461 aa12.53□□□□□ -0.4
FAM228B-209ENST00000615135 FRMPD1Q5SYB0 1578 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms