RNA–Protein interactions for RNA: ENST00000615043.1

PCDH15-228, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-228ENST00000615043 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
PCDH15-228ENST00000615043 WIZO95785 1651 aa16.97■□□□□ 0.31
PCDH15-228ENST00000615043 ZBTB47Q9UFB7 747 aaPredicted RBP16.95■□□□□ 0.3
PCDH15-228ENST00000615043 PAXIP1Q6ZW49 1069 aaPredicted RBP16.94■□□□□ 0.3
PCDH15-228ENST00000615043 CIZ1Q9ULV3 898 aaPredicted RBP16.93■□□□□ 0.3
PCDH15-228ENST00000615043 PEG3Q9GZU2 1588 aa16.92■□□□□ 0.3
PCDH15-228ENST00000615043 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
PCDH15-228ENST00000615043 BCANQ96GW7 911 aa16.91■□□□□ 0.3
PCDH15-228ENST00000615043 SMARCA2P51531 1590 aa16.9■□□□□ 0.3
PCDH15-228ENST00000615043 CFAP44Q96MT7 982 aa16.9■□□□□ 0.3
PCDH15-228ENST00000615043 ATAD2BQ9ULI0 1458 aa16.89■□□□□ 0.29
PCDH15-228ENST00000615043 CACNB1Q02641 598 aaPredicted RBP16.85■□□□□ 0.29
PCDH15-228ENST00000615043 TOP2AP11388 1531 aaKnown RBP16.8■□□□□ 0.28
PCDH15-228ENST00000615043 BAZ1BQ9UIG0 1483 aaKnown RBP16.8■□□□□ 0.28
PCDH15-228ENST00000615043 KDM2AQ9Y2K7 1162 aa16.8■□□□□ 0.28
PCDH15-228ENST00000615043 SPRYD3Q8NCJ5 442 aa16.79■□□□□ 0.28
PCDH15-228ENST00000615043 NCAPD3P42695 1498 aa16.79■□□□□ 0.28
PCDH15-228ENST00000615043 HMGXB3Q12766 1538 aa16.78■□□□□ 0.28
PCDH15-228ENST00000615043 CHGAP10645 457 aaKnown RBP16.77■□□□□ 0.28
PCDH15-228ENST00000615043 TRIM41Q8WV44 630 aa16.77■□□□□ 0.28
PCDH15-228ENST00000615043 GSE1Q14687 1217 aa16.67■□□□□ 0.26
PCDH15-228ENST00000615043 TSHZ2Q9NRE2 1034 aa16.67■□□□□ 0.26
PCDH15-228ENST00000615043 TAOK2Q9UL54 1235 aa16.64■□□□□ 0.25
PCDH15-228ENST00000615043 SPDYE1Q8NFV5 336 aaPredicted RBP16.62■□□□□ 0.25
PCDH15-228ENST00000615043 NUBP1P53384 320 aa16.61■□□□□ 0.25
PCDH15-228ENST00000615043 HS6ST3Q8IZP7 471 aa16.61■□□□□ 0.25
PCDH15-228ENST00000615043 PRKCSHP14314 528 aaPredicted RBP16.6■□□□□ 0.25
PCDH15-228ENST00000615043 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
PCDH15-228ENST00000615043 RNF25Q96BH1 459 aaPredicted RBP16.57■□□□□ 0.24
PCDH15-228ENST00000615043 DCAF8Q5TAQ9 597 aa16.56■□□□□ 0.24
PCDH15-228ENST00000615043 AKT1S1Q96B36 256 aa16.56■□□□□ 0.24
PCDH15-228ENST00000615043 RBM42Q9BTD8 480 aaKnown RBP16.55■□□□□ 0.24
PCDH15-228ENST00000615043 CLEC11AQ9Y240 323 aa16.52■□□□□ 0.24
PCDH15-228ENST00000615043 PRR29P0C7W0 189 aa16.49■□□□□ 0.23
PCDH15-228ENST00000615043 DNAJC5Q9H3Z4 198 aa16.49■□□□□ 0.23
PCDH15-228ENST00000615043 CREBZFQ9NS37 354 aa16.48■□□□□ 0.23
PCDH15-228ENST00000615043 RIOK3O14730 519 aaKnown RBP16.47■□□□□ 0.23
PCDH15-228ENST00000615043 FAM212AQ96EL1 285 aa16.46■□□□□ 0.23
PCDH15-228ENST00000615043 MNX1P50219 401 aaPredicted RBP16.42■□□□□ 0.22
PCDH15-228ENST00000615043 TPRNQ4KMQ1 711 aa16.42■□□□□ 0.22
PCDH15-228ENST00000615043 REM2Q8IYK8 340 aaPredicted RBP16.4■□□□□ 0.22
PCDH15-228ENST00000615043 NKX1-1Q15270 411 aaPredicted RBP16.38■□□□□ 0.21
PCDH15-228ENST00000615043 VGFO15240 615 aaPredicted RBP16.35■□□□□ 0.21
PCDH15-228ENST00000615043 STK25O00506 426 aa16.34■□□□□ 0.21
PCDH15-228ENST00000615043 CHRM1P11229 460 aaPredicted RBP16.34■□□□□ 0.21
PCDH15-228ENST00000615043 CFTRP13569 1480 aa16.34■□□□□ 0.21
PCDH15-228ENST00000615043 RASEFQ8IZ41 740 aa16.33■□□□□ 0.2
PCDH15-228ENST00000615043 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
PCDH15-228ENST00000615043 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
PCDH15-228ENST00000615043 LAMC3Q9Y6N6 1575 aa16.3■□□□□ 0.2
PCDH15-228ENST00000615043 GTPBP6O43824 516 aaPredicted RBP16.3■□□□□ 0.2
PCDH15-228ENST00000615043 NESP48681 1621 aa16.3■□□□□ 0.2
PCDH15-228ENST00000615043 NBR1Q14596 966 aa16.26■□□□□ 0.19
PCDH15-228ENST00000615043 SGIP1Q9BQI5 828 aa16.25■□□□□ 0.19
PCDH15-228ENST00000615043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.21■□□□□ 0.19
PCDH15-228ENST00000615043 PITPNM1O00562 1244 aa16.21■□□□□ 0.19
PCDH15-228ENST00000615043 PYGBP11216 843 aa16.21■□□□□ 0.19
PCDH15-228ENST00000615043 ZFP91Q96JP5 570 aaPredicted RBP16.21■□□□□ 0.19
PCDH15-228ENST00000615043 STK24Q9Y6E0 443 aa16.21■□□□□ 0.19
PCDH15-228ENST00000615043 BCL11BQ9C0K0 894 aaPredicted RBP16.2■□□□□ 0.18
PCDH15-228ENST00000615043 FANCD2Q9BXW9 1451 aa16.17■□□□□ 0.18
PCDH15-228ENST00000615043 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
PCDH15-228ENST00000615043 PDS5BQ9NTI5 1447 aa16.16■□□□□ 0.18
PCDH15-228ENST00000615043 KIF21AQ7Z4S6 1674 aa16.15■□□□□ 0.18
PCDH15-228ENST00000615043 RYDENQ9NUL5 291 aaKnown RBP16.13■□□□□ 0.17
PCDH15-228ENST00000615043 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
PCDH15-228ENST00000615043 WRNQ14191 1432 aaPredicted RBP eCLIP16.08■□□□□ 0.16
PCDH15-228ENST00000615043 ERCC6Q03468 1493 aa16.07■□□□□ 0.16
PCDH15-228ENST00000615043 SYNJ1O43426 1573 aa16.05■□□□□ 0.16
PCDH15-228ENST00000615043 CHADLQ6NUI6 762 aa16.03■□□□□ 0.16
PCDH15-228ENST00000615043 CUX1P39880 1505 aa16.03■□□□□ 0.16
PCDH15-228ENST00000615043 TSPYL2Q9H2G4 693 aaPredicted RBP16.02■□□□□ 0.16
PCDH15-228ENST00000615043 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
PCDH15-228ENST00000615043 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
PCDH15-228ENST00000615043 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
PCDH15-228ENST00000615043 MRC2Q9UBG0 1479 aa16■□□□□ 0.15
PCDH15-228ENST00000615043 ZNF467Q7Z7K2 595 aaPredicted RBP15.99■□□□□ 0.15
PCDH15-228ENST00000615043 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
PCDH15-228ENST00000615043 TOPBP1Q92547 1522 aa15.97■□□□□ 0.15
PCDH15-228ENST00000615043 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.15
PCDH15-228ENST00000615043 FARP1Q9Y4F1 1045 aaPredicted RBP15.95■□□□□ 0.14
PCDH15-228ENST00000615043 WDR62O43379 1518 aa15.94■□□□□ 0.14
PCDH15-228ENST00000615043 PDAP1Q13442 181 aaKnown RBP15.92■□□□□ 0.14
PCDH15-228ENST00000615043 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
PCDH15-228ENST00000615043 PCDHB8Q9UN66 801 aa15.89■□□□□ 0.13
PCDH15-228ENST00000615043 PCDHB13Q9Y5F0 798 aa15.89■□□□□ 0.13
PCDH15-228ENST00000615043 POLA1P09884 1462 aaPredicted RBP15.86■□□□□ 0.13
PCDH15-228ENST00000615043 P3H3Q8IVL6 736 aa15.84■□□□□ 0.13
PCDH15-228ENST00000615043 CCDC61Q9Y6R9 512 aa15.83■□□□□ 0.12
PCDH15-228ENST00000615043 PSEN1P49768 467 aa15.82■□□□□ 0.12
PCDH15-228ENST00000615043 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
PCDH15-228ENST00000615043 CADPS2Q86UW7 1296 aa15.81■□□□□ 0.12
PCDH15-228ENST00000615043 ZNF579Q8NAF0 562 aaKnown RBP15.81■□□□□ 0.12
PCDH15-228ENST00000615043 RAD54L2Q9Y4B4 1467 aa15.8■□□□□ 0.12
PCDH15-228ENST00000615043 WDR70Q9NW82 654 aa15.8■□□□□ 0.12
PCDH15-228ENST00000615043 SOGA1O94964 1423 aa15.78■□□□□ 0.12
PCDH15-228ENST00000615043 CUX2O14529 1486 aa15.78■□□□□ 0.12
PCDH15-228ENST00000615043 WDR97A6NE52 1622 aa15.77■□□□□ 0.12
PCDH15-228ENST00000615043 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
PCDH15-228ENST00000615043 MFRPQ9BY79 579 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms