RNA–Protein interactions for RNA: ENST00000614941.4

SYNRG-222, Transcript of synergin gamma, humanhuman

TSL 1 (best) BASIC

Gene SYNRG, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-222ENST00000614941 HNRNPUQ00839 825 aaKnown RBP eCLIP22.29■■□□□ 1.16
SYNRG-222ENST00000614941 CCNB3Q8WWL7 1395 aa22.29■■□□□ 1.16
SYNRG-222ENST00000614941 RAB3GAP2Q9H2M9 1393 aa22.29■■□□□ 1.16
SYNRG-222ENST00000614941 WDR97A6NE52 1622 aa22.27■■□□□ 1.15
SYNRG-222ENST00000614941 CCER2I3L3R5 266 aa22.26■■□□□ 1.15
SYNRG-222ENST00000614941 MAPKBP1O60336 1514 aa22.24■■□□□ 1.15
SYNRG-222ENST00000614941 CUX2O14529 1486 aa22.23■■□□□ 1.15
SYNRG-222ENST00000614941 B4GALNT3Q6L9W6 998 aa22.18■■□□□ 1.14
SYNRG-222ENST00000614941 PAK3O75914 559 aaPredicted RBP22.17■■□□□ 1.14
SYNRG-222ENST00000614941 MYT1LQ9UL68 1186 aa22.17■■□□□ 1.14
SYNRG-222ENST00000614941 SALL2Q9Y467 1007 aaPredicted RBP22.16■■□□□ 1.14
SYNRG-222ENST00000614941 CCDC136Q96JN2 1154 aa22.13■■□□□ 1.13
SYNRG-222ENST00000614941 NOP58Q9Y2X3 529 aaKnown RBP22.11■■□□□ 1.13
SYNRG-222ENST00000614941 FAM50AQ14320 339 aaKnown RBP22.1■■□□□ 1.13
SYNRG-222ENST00000614941 RTN4Q9NQC3 1192 aaKnown RBP22.1■■□□□ 1.13
SYNRG-222ENST00000614941 PRXQ9BXM0 1461 aa22.09■■□□□ 1.13
SYNRG-222ENST00000614941 PPP4R2Q9NY27 417 aa22.08■■□□□ 1.12
SYNRG-222ENST00000614941 SETD5Q9C0A6 1442 aa22.07■■□□□ 1.12
SYNRG-222ENST00000614941 ERICH3Q5RHP9 1530 aa22.04■■□□□ 1.12
SYNRG-222ENST00000614941 IL27Q8NEV9 243 aa22.03■■□□□ 1.12
SYNRG-222ENST00000614941 TOP2BQ02880 1626 aa22.01■■□□□ 1.11
SYNRG-222ENST00000614941 CC2D2AQ9P2K1 1620 aa22■■□□□ 1.11
SYNRG-222ENST00000614941 ARHGAP35Q9NRY4 1499 aa22■■□□□ 1.11
SYNRG-222ENST00000614941 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.97■■□□□ 1.11
SYNRG-222ENST00000614941 RTL5Q5HYW3 569 aaPredicted RBP21.96■■□□□ 1.11
SYNRG-222ENST00000614941 CCDC184Q52MB2 194 aa21.95■■□□□ 1.1
SYNRG-222ENST00000614941 PEG3Q9GZU2 1588 aa21.94■■□□□ 1.1
SYNRG-222ENST00000614941 FAM9BQ8IZU0 186 aa21.93■■□□□ 1.1
SYNRG-222ENST00000614941 PHLDB1Q86UU1 1377 aa21.92■■□□□ 1.1
SYNRG-222ENST00000614941 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
SYNRG-222ENST00000614941 ATP1B4Q9UN42 357 aaPredicted RBP21.9■■□□□ 1.1
SYNRG-222ENST00000614941 TONSLQ96HA7 1378 aa21.89■■□□□ 1.1
SYNRG-222ENST00000614941 TIMELESSQ9UNS1 1208 aa21.87■■□□□ 1.09
SYNRG-222ENST00000614941 ERICH6BQ5W0A0 696 aa21.85■■□□□ 1.09
SYNRG-222ENST00000614941 ANP32AP39687 249 aaKnown RBP21.84■■□□□ 1.09
SYNRG-222ENST00000614941 KIF27Q86VH2 1401 aa21.84■■□□□ 1.09
SYNRG-222ENST00000614941 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
SYNRG-222ENST00000614941 SENP3-EIF4A1A0A087X0R7 540 aa21.84■■□□□ 1.09
SYNRG-222ENST00000614941 ZBTB47Q9UFB7 747 aaPredicted RBP21.83■■□□□ 1.08
SYNRG-222ENST00000614941 TIAM1Q13009 1591 aa21.82■■□□□ 1.08
SYNRG-222ENST00000614941 CNGB1Q14028 1251 aaPredicted RBP21.81■■□□□ 1.08
SYNRG-222ENST00000614941 IPO9Q96P70 1041 aaKnown RBP21.81■■□□□ 1.08
SYNRG-222ENST00000614941 LRRC9Q6ZRR7 1453 aa21.79■■□□□ 1.08
SYNRG-222ENST00000614941 P3H3Q8IVL6 736 aa21.79■■□□□ 1.08
SYNRG-222ENST00000614941 NPM2Q86SE8 214 aaKnown RBP21.77■■□□□ 1.08
SYNRG-222ENST00000614941 WASHC2AQ641Q2 1341 aa21.77■■□□□ 1.07
SYNRG-222ENST00000614941 MRS2Q9HD23 443 aa21.76■■□□□ 1.07
SYNRG-222ENST00000614941 LAS1LQ9Y4W2 734 aaKnown RBP21.75■■□□□ 1.07
SYNRG-222ENST00000614941 CUX1P39880 1505 aa21.75■■□□□ 1.07
SYNRG-222ENST00000614941 HSPA5P11021 654 aaKnown RBP21.72■■□□□ 1.07
SYNRG-222ENST00000614941 AKNAQ7Z591 1439 aa21.67■■□□□ 1.06
SYNRG-222ENST00000614941 MAP3K1Q13233 1512 aa21.66■■□□□ 1.06
SYNRG-222ENST00000614941 NEFMP07197 916 aa21.65■■□□□ 1.06
SYNRG-222ENST00000614941 ZBED9Q6R2W3 1325 aa21.65■■□□□ 1.06
SYNRG-222ENST00000614941 PRKRIP1Q9H875 184 aaPredicted RBP21.63■■□□□ 1.05
SYNRG-222ENST00000614941 EIF5BO60841 1220 aaKnown RBP21.61■■□□□ 1.05
SYNRG-222ENST00000614941 C11orf95C9JLR9 678 aaPredicted RBP21.6■■□□□ 1.05
SYNRG-222ENST00000614941 IGF1RP08069 1367 aa21.59■■□□□ 1.05
SYNRG-222ENST00000614941 CCDC18Q5T9S5 1454 aa21.58■■□□□ 1.04
SYNRG-222ENST00000614941 BRPF3Q9ULD4 1205 aa21.57■■□□□ 1.04
SYNRG-222ENST00000614941 FHAD1B1AJZ9 1412 aa21.57■■□□□ 1.04
SYNRG-222ENST00000614941 EIF4G2P78344 907 aaKnown RBP eCLIP21.56■■□□□ 1.04
SYNRG-222ENST00000614941 PCF11O94913 1555 aaKnown RBP21.55■■□□□ 1.04
SYNRG-222ENST00000614941 CARMIL1Q5VZK9 1371 aa21.54■■□□□ 1.04
SYNRG-222ENST00000614941 CNTLNQ9NXG0 1405 aa21.52■■□□□ 1.04
SYNRG-222ENST00000614941 PTPRKQ15262 1439 aa21.51■■□□□ 1.03
SYNRG-222ENST00000614941 UACAQ9BZF9 1416 aa21.51■■□□□ 1.03
SYNRG-222ENST00000614941 UBE2Q2Q8WVN8 375 aa21.51■■□□□ 1.03
SYNRG-222ENST00000614941 FHOD3Q2V2M9 1422 aa21.5■■□□□ 1.03
SYNRG-222ENST00000614941 AQRO60306 1485 aaKnown RBP eCLIP21.5■■□□□ 1.033e-7■■■■■ 29
SYNRG-222ENST00000614941 NCAPD3P42695 1498 aa21.5■■□□□ 1.03
SYNRG-222ENST00000614941 CFAP43Q8NDM7 1665 aa21.48■■□□□ 1.03
SYNRG-222ENST00000614941 KDM5BQ9UGL1 1544 aa21.48■■□□□ 1.03
SYNRG-222ENST00000614941 POLR3GLQ9BT43 218 aa21.48■■□□□ 1.03
SYNRG-222ENST00000614941 NUDCQ9Y266 331 aa21.46■■□□□ 1.03
SYNRG-222ENST00000614941 FGD6Q6ZV73 1430 aa21.46■■□□□ 1.03
SYNRG-222ENST00000614941 HFM1A2PYH4 1435 aa21.43■■□□□ 1.02
SYNRG-222ENST00000614941 CCDC7Q96M83 1385 aa21.42■■□□□ 1.02
SYNRG-222ENST00000614941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.42■■□□□ 1.02
SYNRG-222ENST00000614941 FOXD1Q16676 465 aa21.42■■□□□ 1.02
SYNRG-222ENST00000614941 RRP7BPQ9NSQ0 103 aa21.42■■□□□ 1.02
SYNRG-222ENST00000614941 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
SYNRG-222ENST00000614941 CHIC2Q9UKJ5 165 aa21.41■■□□□ 1.02
SYNRG-222ENST00000614941 PTPN23Q9H3S7 1636 aa21.4■■□□□ 1.02
SYNRG-222ENST00000614941 SMG6Q86US8 1419 aaKnown RBP21.4■■□□□ 1.02
SYNRG-222ENST00000614941 NAIPQ13075 1403 aa21.4■■□□□ 1.02
SYNRG-222ENST00000614941 PDE4AP27815 886 aa21.39■■□□□ 1.02
SYNRG-222ENST00000614941 NCOA2Q15596 1464 aa21.39■■□□□ 1.02
SYNRG-222ENST00000614941 L3MBTL2Q969R5 705 aa21.39■■□□□ 1.01
SYNRG-222ENST00000614941 SKAP1Q86WV1 359 aa21.38■■□□□ 1.01
SYNRG-222ENST00000614941 WASHC2CQ9Y4E1 1318 aa21.38■■□□□ 1.01
SYNRG-222ENST00000614941 USP35Q9P2H5 1018 aa21.37■■□□□ 1.01
SYNRG-222ENST00000614941 EXOC6Q8TAG9 804 aa21.36■■□□□ 1.01
SYNRG-222ENST00000614941 MTUS2Q5JR59 1369 aa21.36■■□□□ 1.01
SYNRG-222ENST00000614941 SLC4A3P48751 1232 aa21.36■■□□□ 1.01
SYNRG-222ENST00000614941 KIF7Q2M1P5 1343 aa21.34■■□□□ 1.01
SYNRG-222ENST00000614941 RNF123Q5XPI4 1314 aa21.34■■□□□ 1.01
SYNRG-222ENST00000614941 CFTRP13569 1480 aa21.33■■□□□ 1.01
SYNRG-222ENST00000614941 FYCO1Q9BQS8 1478 aa21.33■■□□□ 1
SYNRG-222ENST00000614941 PPM1GO15355 546 aaPredicted RBP21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms