RNA–Protein interactions for RNA: ENST00000613445.4

SLC1A3-216, Transcript of solute carrier family 1 member 3, humanhuman

TSL 5 BASIC

Gene SLC1A3, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-216ENST00000613445 IGF1RP08069 1367 aa7.97□□□□□ -1.13
SLC1A3-216ENST00000613445 CHD1O14646 1710 aa7.97□□□□□ -1.13
SLC1A3-216ENST00000613445 CHMP7Q8WUX9 453 aaPredicted RBP7.97□□□□□ -1.13
SLC1A3-216ENST00000613445 GRIN2AQ12879 1464 aa7.95□□□□□ -1.14
SLC1A3-216ENST00000613445 RANGAP1P46060 587 aaPredicted RBP7.94□□□□□ -1.14
SLC1A3-216ENST00000613445 CARMIL1Q5VZK9 1371 aa7.94□□□□□ -1.14
SLC1A3-216ENST00000613445 NUP160Q12769 1436 aa7.93□□□□□ -1.14
SLC1A3-216ENST00000613445 RAPGEF2Q9Y4G8 1499 aa7.92□□□□□ -1.14
SLC1A3-216ENST00000613445 CLASP1Q7Z460 1538 aa7.92□□□□□ -1.14
SLC1A3-216ENST00000613445 CSRNP3Q8WYN3 585 aa7.91□□□□□ -1.14
SLC1A3-216ENST00000613445 ATP1B4Q9UN42 357 aaPredicted RBP7.91□□□□□ -1.14
SLC1A3-216ENST00000613445 PRXQ9BXM0 1461 aa7.91□□□□□ -1.14
SLC1A3-216ENST00000613445 RUSC2Q8N2Y8 1516 aa7.89□□□□□ -1.15
SLC1A3-216ENST00000613445 ACIN1Q9UKV3 1341 aaKnown RBP7.89□□□□□ -1.15
SLC1A3-216ENST00000613445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.89□□□□□ -1.15
SLC1A3-216ENST00000613445 HNRNPUL2Q1KMD3 747 aaKnown RBP7.89□□□□□ -1.15
SLC1A3-216ENST00000613445 KIAA0586Q9BVV6 1533 aa7.89□□□□□ -1.15
SLC1A3-216ENST00000613445 KIF21BO75037 1637 aa7.89□□□□□ -1.15
SLC1A3-216ENST00000613445 CEP170Q5SW79 1584 aa7.89□□□□□ -1.15
SLC1A3-216ENST00000613445 NEUROD1Q13562 356 aa7.88□□□□□ -1.15
SLC1A3-216ENST00000613445 SHROOM2Q13796 1616 aa7.87□□□□□ -1.15
SLC1A3-216ENST00000613445 CEP162Q5TB80 1403 aa7.86□□□□□ -1.15
SLC1A3-216ENST00000613445 CTTNBP2Q8WZ74 1663 aa7.85□□□□□ -1.15
SLC1A3-216ENST00000613445 TNIKQ9UKE5 1360 aa7.85□□□□□ -1.15
SLC1A3-216ENST00000613445 IQGAP2Q13576 1575 aa7.84□□□□□ -1.15
SLC1A3-216ENST00000613445 GOLGA3Q08378 1498 aa7.83□□□□□ -1.16
SLC1A3-216ENST00000613445 ARHGEF11O15085 1522 aa7.82□□□□□ -1.16
SLC1A3-216ENST00000613445 JPH4Q96JJ6 628 aa7.82□□□□□ -1.16
SLC1A3-216ENST00000613445 UGGT2Q9NYU1 1516 aa7.82□□□□□ -1.16
SLC1A3-216ENST00000613445 CARMIL2Q6F5E8 1435 aa7.82□□□□□ -1.16
SLC1A3-216ENST00000613445 RIMBP3CA6NJZ7 1639 aa7.82□□□□□ -1.16
SLC1A3-216ENST00000613445 RIMBP3BA6NNM3 1639 aa7.82□□□□□ -1.16
SLC1A3-216ENST00000613445 RIMBP3Q9UFD9 1639 aa7.82□□□□□ -1.16
SLC1A3-216ENST00000613445 NPM1P06748 294 aaKnown RBP eCLIP7.82□□□□□ -1.16
SLC1A3-216ENST00000613445 PRG4Q92954 1404 aaPredicted RBP7.8□□□□□ -1.16
SLC1A3-216ENST00000613445 EFCAB5A4FU69 1503 aa7.77□□□□□ -1.17
SLC1A3-216ENST00000613445 KIAA0556O60303 1618 aa7.76□□□□□ -1.17
SLC1A3-216ENST00000613445 DIEXFQ68CQ4 756 aaKnown RBP7.76□□□□□ -1.17
SLC1A3-216ENST00000613445 ARAP1Q96P48 1450 aa7.75□□□□□ -1.17
SLC1A3-216ENST00000613445 DISP1Q96F81 1524 aa7.75□□□□□ -1.17
SLC1A3-216ENST00000613445 UBTFP17480 764 aaKnown RBP7.75□□□□□ -1.17
SLC1A3-216ENST00000613445 SAMD9Q5K651 1589 aa7.75□□□□□ -1.17
SLC1A3-216ENST00000613445 GTF3C3Q9Y5Q9 886 aa7.75□□□□□ -1.17
SLC1A3-216ENST00000613445 CYB5RLQ6IPT4 315 aa7.74□□□□□ -1.17
SLC1A3-216ENST00000613445 PTPRGP23470 1445 aa7.73□□□□□ -1.17
SLC1A3-216ENST00000613445 UHRF1BP1LA0JNW5 1464 aa7.72□□□□□ -1.17
SLC1A3-216ENST00000613445 ERCC6L2Q5T890 1561 aa7.72□□□□□ -1.17
SLC1A3-216ENST00000613445 CCER1Q8TC90 406 aaPredicted RBP7.72□□□□□ -1.17
SLC1A3-216ENST00000613445 SENP3Q9H4L4 574 aaPredicted RBP7.72□□□□□ -1.17
SLC1A3-216ENST00000613445 UACAQ9BZF9 1416 aa7.7□□□□□ -1.18
SLC1A3-216ENST00000613445 CLIP1P30622 1438 aa7.69□□□□□ -1.18
SLC1A3-216ENST00000613445 ZNF316A6NFI3 1004 aaPredicted RBP7.68□□□□□ -1.18
SLC1A3-216ENST00000613445 FMN1Q68DA7 1419 aa7.68□□□□□ -1.18
SLC1A3-216ENST00000613445 VPS8Q8N3P4 1428 aa7.68□□□□□ -1.18
SLC1A3-216ENST00000613445 ABCC2Q92887 1545 aa7.68□□□□□ -1.18
SLC1A3-216ENST00000613445 ABCA8O94911 1581 aa7.68□□□□□ -1.18
SLC1A3-216ENST00000613445 ADCY10Q96PN6 1610 aa7.66□□□□□ -1.18
SLC1A3-216ENST00000613445 ARHGAP35Q9NRY4 1499 aa7.66□□□□□ -1.18
SLC1A3-216ENST00000613445 RAPGEF6Q8TEU7 1601 aa7.66□□□□□ -1.18
SLC1A3-216ENST00000613445 MAPKBP1O60336 1514 aa7.65□□□□□ -1.18
SLC1A3-216ENST00000613445 KDM5BQ9UGL1 1544 aa7.65□□□□□ -1.19
SLC1A3-216ENST00000613445 CENPBP07199 599 aaPredicted RBP7.65□□□□□ -1.19
SLC1A3-216ENST00000613445 ESF1Q9H501 851 aaKnown RBP7.64□□□□□ -1.19
SLC1A3-216ENST00000613445 FHOD3Q2V2M9 1422 aa7.64□□□□□ -1.19
SLC1A3-216ENST00000613445 PLB1Q6P1J6 1458 aa7.63□□□□□ -1.19
SLC1A3-216ENST00000613445 HECW1Q76N89 1606 aa7.63□□□□□ -1.19
SLC1A3-216ENST00000613445 MIER1Q8N108 512 aa7.63□□□□□ -1.19
SLC1A3-216ENST00000613445 MYT1Q01538 1121 aa7.62□□□□□ -1.19
SLC1A3-216ENST00000613445 ARID4BQ4LE39 1312 aaPredicted RBP7.62□□□□□ -1.19
SLC1A3-216ENST00000613445 CASKIN1Q8WXD9 1431 aa7.62□□□□□ -1.19
SLC1A3-216ENST00000613445 ZCCHC11Q5TAX3 1644 aaKnown RBP7.62□□□□□ -1.19
SLC1A3-216ENST00000613445 P3H3Q8IVL6 736 aa7.62□□□□□ -1.19
SLC1A3-216ENST00000613445 ARID3CA6NKF2 412 aa7.61□□□□□ -1.19
SLC1A3-216ENST00000613445 CCDC18Q5T9S5 1454 aa7.61□□□□□ -1.19
SLC1A3-216ENST00000613445 FYCO1Q9BQS8 1478 aa7.61□□□□□ -1.19
SLC1A3-216ENST00000613445 DHX57Q6P158 1386 aaKnown RBP7.6□□□□□ -1.19
SLC1A3-216ENST00000613445 RRBP1Q9P2E9 1410 aaKnown RBP7.6□□□□□ -1.19
SLC1A3-216ENST00000613445 GLI2P10070 1586 aa7.6□□□□□ -1.19
SLC1A3-216ENST00000613445 CDK11AQ9UQ88 783 aaPredicted RBP7.59□□□□□ -1.19
SLC1A3-216ENST00000613445 NUP153P49790 1475 aaKnown RBP7.59□□□□□ -1.19
SLC1A3-216ENST00000613445 ATP10BO94823 1461 aa7.58□□□□□ -1.2
SLC1A3-216ENST00000613445 CLSPNQ9HAW4 1339 aa7.58□□□□□ -1.2
SLC1A3-216ENST00000613445 ABCC10Q5T3U5 1492 aa7.58□□□□□ -1.2
SLC1A3-216ENST00000613445 WDR7Q9Y4E6 1490 aa7.58□□□□□ -1.2
SLC1A3-216ENST00000613445 ASXL2Q76L83 1435 aa7.58□□□□□ -1.2
SLC1A3-216ENST00000613445 EPRSP07814 1512 aaKnown RBP7.57□□□□□ -1.2
SLC1A3-216ENST00000613445 PCF11O94913 1555 aaKnown RBP7.56□□□□□ -1.2
SLC1A3-216ENST00000613445 PLEKHD1A6NEE1 506 aa7.56□□□□□ -1.2
SLC1A3-216ENST00000613445 MAP3K1Q13233 1512 aa7.56□□□□□ -1.2
SLC1A3-216ENST00000613445 DIP2BQ9P265 1576 aa7.55□□□□□ -1.2
SLC1A3-216ENST00000613445 BCANQ96GW7 911 aa7.55□□□□□ -1.2
SLC1A3-216ENST00000613445 CFAP43Q8NDM7 1665 aa7.54□□□□□ -1.2
SLC1A3-216ENST00000613445 KIF13AQ9H1H9 1805 aa7.54□□□□□ -1.2
SLC1A3-216ENST00000613445 PHLDB1Q86UU1 1377 aa7.53□□□□□ -1.2
SLC1A3-216ENST00000613445 TROQ12816 1431 aaPredicted RBP7.52□□□□□ -1.2
SLC1A3-216ENST00000613445 ABCA9Q8IUA7 1624 aa7.52□□□□□ -1.21
SLC1A3-216ENST00000613445 MAP3K4Q9Y6R4 1608 aa7.52□□□□□ -1.21
SLC1A3-216ENST00000613445 TEX14Q8IWB6 1497 aa7.52□□□□□ -1.21
SLC1A3-216ENST00000613445 FAM69CQ0P6D2 419 aa7.52□□□□□ -1.21
SLC1A3-216ENST00000613445 LRRIQ1Q96JM4 1722 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms