RNA–Protein interactions for RNA: ENST00000613355.4

CBWD1-221, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-221ENST00000613355 RUSC2Q8N2Y8 1516 aa20.81■□□□□ 0.92
CBWD1-221ENST00000613355 JPH4Q96JJ6 628 aa20.79■□□□□ 0.92
CBWD1-221ENST00000613355 KIAA0586Q9BVV6 1533 aa20.77■□□□□ 0.92
CBWD1-221ENST00000613355 PRG4Q92954 1404 aaPredicted RBP20.77■□□□□ 0.91
CBWD1-221ENST00000613355 RAPGEF2Q9Y4G8 1499 aa20.74■□□□□ 0.91
CBWD1-221ENST00000613355 ERCC6L2Q5T890 1561 aa20.72■□□□□ 0.91
CBWD1-221ENST00000613355 TRHP20396 242 aaPredicted RBP20.7■□□□□ 0.9
CBWD1-221ENST00000613355 IQGAP2Q13576 1575 aa20.66■□□□□ 0.9
CBWD1-221ENST00000613355 CARMIL2Q6F5E8 1435 aa20.65■□□□□ 0.9
CBWD1-221ENST00000613355 EEA1Q15075 1411 aa20.62■□□□□ 0.89
CBWD1-221ENST00000613355 NPM1P06748 294 aaKnown RBP eCLIP20.59■□□□□ 0.89
CBWD1-221ENST00000613355 CTTNBP2Q8WZ74 1663 aa20.58■□□□□ 0.89
CBWD1-221ENST00000613355 CSRNP3Q8WYN3 585 aa20.55■□□□□ 0.88
CBWD1-221ENST00000613355 PRXQ9BXM0 1461 aa20.54■□□□□ 0.88
CBWD1-221ENST00000613355 PTPRGP23470 1445 aa20.53■□□□□ 0.88
CBWD1-221ENST00000613355 TNIKQ9UKE5 1360 aa20.53■□□□□ 0.88
CBWD1-221ENST00000613355 TTBK1Q5TCY1 1321 aaPredicted RBP20.51■□□□□ 0.87
CBWD1-221ENST00000613355 FAM9AQ8IZU1 332 aaPredicted RBP20.51■□□□□ 0.87
CBWD1-221ENST00000613355 UGGT2Q9NYU1 1516 aa20.5■□□□□ 0.87
CBWD1-221ENST00000613355 GOLGA3Q08378 1498 aa20.48■□□□□ 0.87
CBWD1-221ENST00000613355 KIAA0556O60303 1618 aa20.44■□□□□ 0.86
CBWD1-221ENST00000613355 ADCY10Q96PN6 1610 aa20.44■□□□□ 0.86
CBWD1-221ENST00000613355 DISP1Q96F81 1524 aa20.43■□□□□ 0.86
CBWD1-221ENST00000613355 MAPKBP1O60336 1514 aa20.38■□□□□ 0.85
CBWD1-221ENST00000613355 UACAQ9BZF9 1416 aa20.37■□□□□ 0.85
CBWD1-221ENST00000613355 KIF21BO75037 1637 aa20.35■□□□□ 0.85
CBWD1-221ENST00000613355 UHRF1BP1LA0JNW5 1464 aa20.34■□□□□ 0.85
CBWD1-221ENST00000613355 ABCC2Q92887 1545 aa20.34■□□□□ 0.85
CBWD1-221ENST00000613355 KIF13AQ9H1H9 1805 aa20.3■□□□□ 0.84
CBWD1-221ENST00000613355 FAM69CQ0P6D2 419 aa20.29■□□□□ 0.84
CBWD1-221ENST00000613355 ABCC10Q5T3U5 1492 aa20.29■□□□□ 0.84
CBWD1-221ENST00000613355 PLB1Q6P1J6 1458 aa20.26■□□□□ 0.83
CBWD1-221ENST00000613355 UBTFP17480 764 aaKnown RBP20.26■□□□□ 0.83
CBWD1-221ENST00000613355 DIP2BQ9P265 1576 aa20.25■□□□□ 0.83
CBWD1-221ENST00000613355 RANGAP1P46060 587 aaPredicted RBP20.24■□□□□ 0.83
CBWD1-221ENST00000613355 P3H3Q8IVL6 736 aa20.24■□□□□ 0.83
CBWD1-221ENST00000613355 KDM5BQ9UGL1 1544 aa20.23■□□□□ 0.83
CBWD1-221ENST00000613355 SAMD9Q5K651 1589 aa20.22■□□□□ 0.83
CBWD1-221ENST00000613355 ZCCHC11Q5TAX3 1644 aaKnown RBP20.22■□□□□ 0.83
CBWD1-221ENST00000613355 ASXL2Q76L83 1435 aa20.21■□□□□ 0.83
CBWD1-221ENST00000613355 EHMT2Q96KQ7 1210 aa20.19■□□□□ 0.82
CBWD1-221ENST00000613355 EFCAB5A4FU69 1503 aa20.19■□□□□ 0.82
CBWD1-221ENST00000613355 ABCA8O94911 1581 aa20.19■□□□□ 0.82
CBWD1-221ENST00000613355 TSPOAP1O95153 1857 aa20.14■□□□□ 0.82
CBWD1-221ENST00000613355 GLI2P10070 1586 aa20.12■□□□□ 0.81
CBWD1-221ENST00000613355 RAPGEF6Q8TEU7 1601 aa20.12■□□□□ 0.81
CBWD1-221ENST00000613355 WDR7Q9Y4E6 1490 aa20.12■□□□□ 0.81
CBWD1-221ENST00000613355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.1■□□□□ 0.81
CBWD1-221ENST00000613355 HNRNPUL2Q1KMD3 747 aaKnown RBP20.1■□□□□ 0.81
CBWD1-221ENST00000613355 PHF23Q9BUL5 403 aaPredicted RBP20.1■□□□□ 0.81
CBWD1-221ENST00000613355 FHOD3Q2V2M9 1422 aa20.09■□□□□ 0.81
CBWD1-221ENST00000613355 EPRSP07814 1512 aaKnown RBP20.09■□□□□ 0.81
CBWD1-221ENST00000613355 TEX14Q8IWB6 1497 aa20.05■□□□□ 0.8
CBWD1-221ENST00000613355 KDM6BO15054 1643 aa20.04■□□□□ 0.8
CBWD1-221ENST00000613355 ARID3CA6NKF2 412 aa20.04■□□□□ 0.8
CBWD1-221ENST00000613355 KCNH8Q96L42 1107 aa20.03■□□□□ 0.8
CBWD1-221ENST00000613355 FMN1Q68DA7 1419 aa20.02■□□□□ 0.8
CBWD1-221ENST00000613355 MAP3K4Q9Y6R4 1608 aa20.02■□□□□ 0.8
CBWD1-221ENST00000613355 ATP10BO94823 1461 aa20.02■□□□□ 0.79
CBWD1-221ENST00000613355 CFAP43Q8NDM7 1665 aa20■□□□□ 0.79
CBWD1-221ENST00000613355 ATP1B4Q9UN42 357 aaPredicted RBP19.97■□□□□ 0.79
CBWD1-221ENST00000613355 NUP153P49790 1475 aaKnown RBP19.97■□□□□ 0.79
CBWD1-221ENST00000613355 ARHGAP35Q9NRY4 1499 aa19.96■□□□□ 0.79
CBWD1-221ENST00000613355 CD109Q6YHK3 1445 aa19.96■□□□□ 0.79
CBWD1-221ENST00000613355 PLEKHD1A6NEE1 506 aa19.95■□□□□ 0.78
CBWD1-221ENST00000613355 HECW1Q76N89 1606 aa19.94■□□□□ 0.78
CBWD1-221ENST00000613355 PPRC1Q5VV67 1664 aaKnown RBP19.94■□□□□ 0.78
CBWD1-221ENST00000613355 CDK11AQ9UQ88 783 aaPredicted RBP19.91■□□□□ 0.78
CBWD1-221ENST00000613355 MAGI3Q5TCQ9 1506 aa19.9■□□□□ 0.78
CBWD1-221ENST00000613355 ABCA9Q8IUA7 1624 aa19.87■□□□□ 0.77
CBWD1-221ENST00000613355 CLIP1P30622 1438 aa19.86■□□□□ 0.77
CBWD1-221ENST00000613355 CDK13Q14004 1512 aaKnown RBP19.82■□□□□ 0.76
CBWD1-221ENST00000613355 PHLDB1Q86UU1 1377 aa19.82■□□□□ 0.76
CBWD1-221ENST00000613355 CCDC18Q5T9S5 1454 aa19.79■□□□□ 0.76
CBWD1-221ENST00000613355 CASKIN1Q8WXD9 1431 aa19.77■□□□□ 0.76
CBWD1-221ENST00000613355 CFAP74Q9C0B2 1584 aa19.77■□□□□ 0.76
CBWD1-221ENST00000613355 PCF11O94913 1555 aaKnown RBP19.77■□□□□ 0.75
CBWD1-221ENST00000613355 NEO1Q92859 1461 aa19.76■□□□□ 0.75
CBWD1-221ENST00000613355 FYCO1Q9BQS8 1478 aa19.75■□□□□ 0.75
CBWD1-221ENST00000613355 KIF14Q15058 1648 aa19.74■□□□□ 0.75
CBWD1-221ENST00000613355 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.73■□□□□ 0.75
CBWD1-221ENST00000613355 ARAP3Q8WWN8 1544 aa19.73■□□□□ 0.75
CBWD1-221ENST00000613355 CEP162Q5TB80 1403 aa19.72■□□□□ 0.75
CBWD1-221ENST00000613355 COL17A1Q9UMD9 1497 aaPredicted RBP19.71■□□□□ 0.75
CBWD1-221ENST00000613355 TROQ12816 1431 aaPredicted RBP19.71■□□□□ 0.75
CBWD1-221ENST00000613355 TTC37Q6PGP7 1564 aa19.69■□□□□ 0.74
CBWD1-221ENST00000613355 FANCAO15360 1455 aa19.69■□□□□ 0.74
CBWD1-221ENST00000613355 MYO5CQ9NQX4 1742 aa19.69■□□□□ 0.74
CBWD1-221ENST00000613355 LRRIQ1Q96JM4 1722 aa19.68■□□□□ 0.74
CBWD1-221ENST00000613355 AKNAQ7Z591 1439 aa19.65■□□□□ 0.74
CBWD1-221ENST00000613355 PLCH2O75038 1416 aa19.64■□□□□ 0.73
CBWD1-221ENST00000613355 EFCAB2Q5VUJ9 269 aa19.63■□□□□ 0.73
CBWD1-221ENST00000613355 DENND4BO75064 1496 aaPredicted RBP19.63■□□□□ 0.73
CBWD1-221ENST00000613355 LOC105371045A0A1W2PR82 267 aa19.61■□□□□ 0.73
CBWD1-221ENST00000613355 ARHGAP5Q13017 1502 aa19.61■□□□□ 0.73
CBWD1-221ENST00000613355 RAPGEF3O95398 923 aa19.59■□□□□ 0.73
CBWD1-221ENST00000613355 ADGRL1O94910 1474 aa19.59■□□□□ 0.73
CBWD1-221ENST00000613355 MTUS2Q5JR59 1369 aa19.58■□□□□ 0.73
CBWD1-221ENST00000613355 RICTORQ6R327 1708 aa19.55■□□□□ 0.72
CBWD1-221ENST00000613355 SCAPERQ9BY12 1400 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms