RNA–Protein interactions for RNA: ENST00000612779.1

HOXA2-202, Transcript of homeobox A2, humanhuman

Gene HOXA2, Length 1,993 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2-202ENST00000612779 VPS8Q8N3P4 1428 aa29.97■■■□□ 2.39
HOXA2-202ENST00000612779 GRIN2AQ12879 1464 aa29.91■■■□□ 2.38
HOXA2-202ENST00000612779 SYNJ2O15056 1496 aa29.9■■■□□ 2.38
HOXA2-202ENST00000612779 EFCAB5A4FU69 1503 aa29.85■■■□□ 2.37
HOXA2-202ENST00000612779 IQGAP2Q13576 1575 aa29.81■■■□□ 2.36
HOXA2-202ENST00000612779 SAMD9Q5K651 1589 aa29.8■■■□□ 2.36
HOXA2-202ENST00000612779 CHMP7Q8WUX9 453 aaPredicted RBP29.75■■■□□ 2.35
HOXA2-202ENST00000612779 CEP170Q5SW79 1584 aa29.75■■■□□ 2.35
HOXA2-202ENST00000612779 KIAA0586Q9BVV6 1533 aa29.75■■■□□ 2.35
HOXA2-202ENST00000612779 NUP160Q12769 1436 aa29.71■■■□□ 2.35
HOXA2-202ENST00000612779 PPARGC1BQ86YN6 1023 aaKnown RBP29.7■■■□□ 2.34
HOXA2-202ENST00000612779 FHOD3Q2V2M9 1422 aa29.69■■■□□ 2.34
HOXA2-202ENST00000612779 UGGT2Q9NYU1 1516 aa29.68■■■□□ 2.34
HOXA2-202ENST00000612779 TRIM26Q12899 539 aaPredicted RBP29.66■■■□□ 2.34
HOXA2-202ENST00000612779 CHD1O14646 1710 aa29.66■■■□□ 2.34
HOXA2-202ENST00000612779 FBLN2P98095 1184 aa29.66■■■□□ 2.34
HOXA2-202ENST00000612779 P3H3Q8IVL6 736 aa29.66■■■□□ 2.34
HOXA2-202ENST00000612779 PCGF6Q9BYE7 350 aa29.6■■■□□ 2.33
HOXA2-202ENST00000612779 PCF11O94913 1555 aaKnown RBP29.58■■■□□ 2.33
HOXA2-202ENST00000612779 DNAJC5Q9H3Z4 198 aa29.55■■■□□ 2.32
HOXA2-202ENST00000612779 FMN1Q68DA7 1419 aa29.55■■■□□ 2.32
HOXA2-202ENST00000612779 DISP1Q96F81 1524 aa29.53■■■□□ 2.32
HOXA2-202ENST00000612779 APLP2Q06481 763 aa29.53■■■□□ 2.32
HOXA2-202ENST00000612779 KIAA0556O60303 1618 aa29.52■■■□□ 2.32
HOXA2-202ENST00000612779 OSCARQ8IYS5 282 aa29.51■■■□□ 2.31
HOXA2-202ENST00000612779 CASKIN1Q8WXD9 1431 aa29.5■■■□□ 2.31
HOXA2-202ENST00000612779 FYCO1Q9BQS8 1478 aa29.5■■■□□ 2.31
HOXA2-202ENST00000612779 MAP3K1Q13233 1512 aa29.5■■■□□ 2.31
HOXA2-202ENST00000612779 TIAM1Q13009 1591 aa29.45■■■□□ 2.31
HOXA2-202ENST00000612779 TTBK1Q5TCY1 1321 aaPredicted RBP29.44■■■□□ 2.3
HOXA2-202ENST00000612779 CFAP43Q8NDM7 1665 aa29.44■■■□□ 2.3
HOXA2-202ENST00000612779 JPH4Q96JJ6 628 aa29.41■■■□□ 2.3
HOXA2-202ENST00000612779 KANK4Q5T7N3 995 aaPredicted RBP29.4■■■□□ 2.3
HOXA2-202ENST00000612779 LRRIQ1Q96JM4 1722 aa29.38■■■□□ 2.29
HOXA2-202ENST00000612779 SHROOM2Q13796 1616 aa29.35■■■□□ 2.29
HOXA2-202ENST00000612779 CARMIL2Q6F5E8 1435 aa29.33■■■□□ 2.29
HOXA2-202ENST00000612779 CLASP1Q7Z460 1538 aa29.31■■■□□ 2.28
HOXA2-202ENST00000612779 LRRC9Q6ZRR7 1453 aa29.3■■■□□ 2.28
HOXA2-202ENST00000612779 HECW1Q76N89 1606 aa29.28■■■□□ 2.28
HOXA2-202ENST00000612779 ATP1B4Q9UN42 357 aaPredicted RBP29.27■■■□□ 2.28
HOXA2-202ENST00000612779 PRG4Q92954 1404 aaPredicted RBP29.25■■■□□ 2.27
HOXA2-202ENST00000612779 RAPGEF6Q8TEU7 1601 aa29.22■■■□□ 2.27
HOXA2-202ENST00000612779 CCDC18Q5T9S5 1454 aa29.2■■■□□ 2.26
HOXA2-202ENST00000612779 EPRSP07814 1512 aaKnown RBP29.18■■■□□ 2.26
HOXA2-202ENST00000612779 NUP153P49790 1475 aaKnown RBP29.15■■■□□ 2.26
HOXA2-202ENST00000612779 ERCC6L2Q5T890 1561 aa29.12■■■□□ 2.25
HOXA2-202ENST00000612779 PLB1Q6P1J6 1458 aa29.12■■■□□ 2.25
HOXA2-202ENST00000612779 ABCA8O94911 1581 aa29.11■■■□□ 2.25
HOXA2-202ENST00000612779 CDK13Q14004 1512 aaKnown RBP29.1■■■□□ 2.25
HOXA2-202ENST00000612779 MAGI3Q5TCQ9 1506 aa29.09■■■□□ 2.25
HOXA2-202ENST00000612779 RRBP1Q9P2E9 1410 aaKnown RBP29.08■■■□□ 2.25
HOXA2-202ENST00000612779 EHBP1L1Q8N3D4 1523 aa29.06■■■□□ 2.24
HOXA2-202ENST00000612779 PTPRGP23470 1445 aa29.05■■■□□ 2.24
HOXA2-202ENST00000612779 MTUS2Q5JR59 1369 aa29.05■■■□□ 2.24
HOXA2-202ENST00000612779 PHLDB1Q86UU1 1377 aa29.02■■■□□ 2.24
HOXA2-202ENST00000612779 SUPT6HQ7KZ85 1726 aaKnown RBP28.99■■■□□ 2.23
HOXA2-202ENST00000612779 ARHGEF11O15085 1522 aa28.98■■■□□ 2.23
HOXA2-202ENST00000612779 RIMBP3CA6NJZ7 1639 aa28.96■■■□□ 2.23
HOXA2-202ENST00000612779 RIMBP3BA6NNM3 1639 aa28.96■■■□□ 2.23
HOXA2-202ENST00000612779 RIMBP3Q9UFD9 1639 aa28.96■■■□□ 2.23
HOXA2-202ENST00000612779 ARID3CA6NKF2 412 aa28.95■■■□□ 2.23
HOXA2-202ENST00000612779 NCOA2Q15596 1464 aa28.95■■■□□ 2.22
HOXA2-202ENST00000612779 CCNB3Q8WWL7 1395 aa28.94■■■□□ 2.22
HOXA2-202ENST00000612779 UACAQ9BZF9 1416 aa28.9■■■□□ 2.22
HOXA2-202ENST00000612779 ATP10BO94823 1461 aa28.89■■■□□ 2.22
HOXA2-202ENST00000612779 ABCC2Q92887 1545 aa28.85■■■□□ 2.21
HOXA2-202ENST00000612779 CDK11AQ9UQ88 783 aaPredicted RBP28.82■■■□□ 2.2
HOXA2-202ENST00000612779 TROQ12816 1431 aaPredicted RBP28.82■■■□□ 2.2
HOXA2-202ENST00000612779 MYOM3Q5VTT5 1437 aa28.82■■■□□ 2.2
HOXA2-202ENST00000612779 FGD6Q6ZV73 1430 aa28.82■■■□□ 2.2
HOXA2-202ENST00000612779 HNRNPUL2Q1KMD3 747 aaKnown RBP28.81■■■□□ 2.2
HOXA2-202ENST00000612779 ADCY10Q96PN6 1610 aa28.81■■■□□ 2.2
HOXA2-202ENST00000612779 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.81■■■□□ 2.2
HOXA2-202ENST00000612779 UHRF1BP1LA0JNW5 1464 aa28.79■■■□□ 2.2
HOXA2-202ENST00000612779 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.78■■■□□ 2.2
HOXA2-202ENST00000612779 KIF14Q15058 1648 aa28.74■■■□□ 2.19
HOXA2-202ENST00000612779 HRCP23327 699 aa28.73■■■□□ 2.19
HOXA2-202ENST00000612779 CYB5RLQ6IPT4 315 aa28.71■■■□□ 2.19
HOXA2-202ENST00000612779 PTPN23Q9H3S7 1636 aa28.7■■■□□ 2.18
HOXA2-202ENST00000612779 PLEKHD1A6NEE1 506 aa28.68■■■□□ 2.18
HOXA2-202ENST00000612779 KDM5BQ9UGL1 1544 aa28.68■■■□□ 2.18
HOXA2-202ENST00000612779 FAM50AQ14320 339 aaKnown RBP28.68■■■□□ 2.18
HOXA2-202ENST00000612779 ZCCHC11Q5TAX3 1644 aaKnown RBP28.67■■■□□ 2.18
HOXA2-202ENST00000612779 MIA2Q96PC5 1412 aa28.67■■■□□ 2.18
HOXA2-202ENST00000612779 TCOF1Q13428 1488 aaKnown RBP28.67■■■□□ 2.18
HOXA2-202ENST00000612779 ABCC10Q5T3U5 1492 aa28.63■■■□□ 2.17
HOXA2-202ENST00000612779 ITSN2Q9NZM3 1697 aa28.61■■■□□ 2.17
HOXA2-202ENST00000612779 ITGAEP38570 1179 aa28.59■■■□□ 2.17
HOXA2-202ENST00000612779 GPATCH8Q9UKJ3 1502 aaKnown RBP28.58■■■□□ 2.17
HOXA2-202ENST00000612779 CDC42BPAQ5VT25 1732 aa28.57■■■□□ 2.16
HOXA2-202ENST00000612779 PTPRKQ15262 1439 aa28.52■■■□□ 2.16
HOXA2-202ENST00000612779 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.47■■■□□ 2.15
HOXA2-202ENST00000612779 TTC37Q6PGP7 1564 aa28.46■■■□□ 2.15
HOXA2-202ENST00000612779 CCER1Q8TC90 406 aaPredicted RBP28.45■■■□□ 2.14
HOXA2-202ENST00000612779 PREX2Q70Z35 1606 aa28.44■■■□□ 2.14
HOXA2-202ENST00000612779 CDC42BPBQ9Y5S2 1711 aa28.43■■■□□ 2.14
HOXA2-202ENST00000612779 CAMSAP2Q08AD1 1489 aa28.43■■■□□ 2.14
HOXA2-202ENST00000612779 DNMT1P26358 1616 aaKnown RBP28.43■■■□□ 2.14
HOXA2-202ENST00000612779 CFDP1Q9UEE9 299 aaPredicted RBP28.43■■■□□ 2.14
HOXA2-202ENST00000612779 ZNF644Q9H582 1327 aaPredicted RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms