RNA–Protein interactions for RNA: ENST00000611331.1

LINC01949-202, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 2

Gene LINC01949, Length 1,618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-202ENST00000611331 GRIN2BQ13224 1484 aa14.2□□□□□ -0.14
LINC01949-202ENST00000611331 ERCC6L2Q5T890 1561 aa14.19□□□□□ -0.14
LINC01949-202ENST00000611331 RNF216Q9NWF9 866 aaPredicted RBP14.16□□□□□ -0.14
LINC01949-202ENST00000611331 NPM3O75607 178 aaKnown RBP14.15□□□□□ -0.14
LINC01949-202ENST00000611331 SLC4A1APQ9BWU0 796 aaKnown RBP14.13□□□□□ -0.15
LINC01949-202ENST00000611331 KDM6BO15054 1643 aa14.13□□□□□ -0.15
LINC01949-202ENST00000611331 HOXD11P31277 338 aaPredicted RBP14.12□□□□□ -0.15
LINC01949-202ENST00000611331 FGD5Q6ZNL6 1462 aa14.12□□□□□ -0.15
LINC01949-202ENST00000611331 FAM69CQ0P6D2 419 aa14.12□□□□□ -0.15
LINC01949-202ENST00000611331 PBRM1Q86U86 1689 aa14.1□□□□□ -0.15
LINC01949-202ENST00000611331 CEP170Q5SW79 1584 aa14.1□□□□□ -0.15
LINC01949-202ENST00000611331 ABCC10Q5T3U5 1492 aa14.09□□□□□ -0.15
LINC01949-202ENST00000611331 HECW2Q9P2P5 1572 aa14.08□□□□□ -0.16
LINC01949-202ENST00000611331 FBXO41Q8TF61 875 aa14.04□□□□□ -0.16
LINC01949-202ENST00000611331 DIP2BQ9P265 1576 aa14.03□□□□□ -0.16
LINC01949-202ENST00000611331 ADGRL1O94910 1474 aa14.03□□□□□ -0.16
LINC01949-202ENST00000611331 GRIN2AQ12879 1464 aa14.02□□□□□ -0.17
LINC01949-202ENST00000611331 SHROOM2Q13796 1616 aa14.02□□□□□ -0.17
LINC01949-202ENST00000611331 MAPKBP1O60336 1514 aa13.99□□□□□ -0.17
LINC01949-202ENST00000611331 NUP160Q12769 1436 aa13.99□□□□□ -0.17
LINC01949-202ENST00000611331 NPM1P06748 294 aaKnown RBP eCLIP13.99□□□□□ -0.17
LINC01949-202ENST00000611331 TSPOAP1O95153 1857 aa13.98□□□□□ -0.17
LINC01949-202ENST00000611331 SLC24A1O60721 1099 aa13.98□□□□□ -0.17
LINC01949-202ENST00000611331 CUX1P39880 1505 aa13.98□□□□□ -0.17
LINC01949-202ENST00000611331 ABCA5Q8WWZ7 1642 aa13.96□□□□□ -0.17
LINC01949-202ENST00000611331 CSRNP3Q8WYN3 585 aa13.96□□□□□ -0.17
LINC01949-202ENST00000611331 LMTK3Q96Q04 1460 aa13.93□□□□□ -0.18
LINC01949-202ENST00000611331 PRG4Q92954 1404 aaPredicted RBP13.93□□□□□ -0.18
LINC01949-202ENST00000611331 ADAMTS12P58397 1594 aa13.92□□□□□ -0.18
LINC01949-202ENST00000611331 ABCA10Q8WWZ4 1543 aa13.91□□□□□ -0.18
LINC01949-202ENST00000611331 ADCY10Q96PN6 1610 aa13.88□□□□□ -0.19
LINC01949-202ENST00000611331 JPH4Q96JJ6 628 aa13.84□□□□□ -0.19
LINC01949-202ENST00000611331 FHAD1B1AJZ9 1412 aa13.84□□□□□ -0.19
LINC01949-202ENST00000611331 SOCS7O14512 581 aa13.8□□□□□ -0.2
LINC01949-202ENST00000611331 DCAF8L1A6NGE4 600 aa13.79□□□□□ -0.2
LINC01949-202ENST00000611331 PPRC1Q5VV67 1664 aaKnown RBP13.77□□□□□ -0.2
LINC01949-202ENST00000611331 TOP2BQ02880 1626 aa13.76□□□□□ -0.21
LINC01949-202ENST00000611331 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
LINC01949-202ENST00000611331 ILDR2Q71H61 639 aa13.74□□□□□ -0.21
LINC01949-202ENST00000611331 COL17A1Q9UMD9 1497 aaPredicted RBP13.73□□□□□ -0.21
LINC01949-202ENST00000611331 ERICH3Q5RHP9 1530 aa13.72□□□□□ -0.21
LINC01949-202ENST00000611331 GLI2P10070 1586 aa13.71□□□□□ -0.21
LINC01949-202ENST00000611331 WRNQ14191 1432 aaPredicted RBP eCLIP13.71□□□□□ -0.21
LINC01949-202ENST00000611331 DISP3Q9P2K9 1392 aa13.7□□□□□ -0.22
LINC01949-202ENST00000611331 CACNB1Q02641 598 aaPredicted RBP13.68□□□□□ -0.22
LINC01949-202ENST00000611331 ASXL2Q76L83 1435 aa13.68□□□□□ -0.22
LINC01949-202ENST00000611331 PLB1Q6P1J6 1458 aa13.67□□□□□ -0.22
LINC01949-202ENST00000611331 TEX14Q8IWB6 1497 aa13.66□□□□□ -0.22
LINC01949-202ENST00000611331 ABCC2Q92887 1545 aa13.64□□□□□ -0.23
LINC01949-202ENST00000611331 MAP3K4Q9Y6R4 1608 aa13.62□□□□□ -0.23
LINC01949-202ENST00000611331 PTPRGP23470 1445 aa13.61□□□□□ -0.23
LINC01949-202ENST00000611331 TTBK1Q5TCY1 1321 aaPredicted RBP13.6□□□□□ -0.23
LINC01949-202ENST00000611331 CUL7Q14999 1698 aa13.59□□□□□ -0.23
LINC01949-202ENST00000611331 EPRSP07814 1512 aaKnown RBP13.58□□□□□ -0.24
LINC01949-202ENST00000611331 KIAA0586Q9BVV6 1533 aa13.58□□□□□ -0.24
LINC01949-202ENST00000611331 KIF21BO75037 1637 aa13.56□□□□□ -0.24
LINC01949-202ENST00000611331 BIVM-ERCC5R4GMW8 1640 aa13.56□□□□□ -0.24
LINC01949-202ENST00000611331 PTPRMP28827 1452 aa13.54□□□□□ -0.24
LINC01949-202ENST00000611331 PCF11O94913 1555 aaKnown RBP13.54□□□□□ -0.24
LINC01949-202ENST00000611331 CERKQ8TCT0 537 aa13.53□□□□□ -0.24
LINC01949-202ENST00000611331 SPATA31D1Q6ZQQ2 1576 aa13.52□□□□□ -0.24
LINC01949-202ENST00000611331 TNIKQ9UKE5 1360 aa13.52□□□□□ -0.25
LINC01949-202ENST00000611331 UHRF1BP1LA0JNW5 1464 aa13.52□□□□□ -0.25
LINC01949-202ENST00000611331 CARMIL2Q6F5E8 1435 aa13.49□□□□□ -0.25
LINC01949-202ENST00000611331 UACAQ9BZF9 1416 aa13.48□□□□□ -0.25
LINC01949-202ENST00000611331 ADAMTSL3P82987 1691 aa13.47□□□□□ -0.25
LINC01949-202ENST00000611331 KDM5BQ9UGL1 1544 aa13.47□□□□□ -0.25
LINC01949-202ENST00000611331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.46□□□□□ -0.26
LINC01949-202ENST00000611331 ZCCHC11Q5TAX3 1644 aaKnown RBP13.45□□□□□ -0.26
LINC01949-202ENST00000611331 MAGI3Q5TCQ9 1506 aa13.43□□□□□ -0.26
LINC01949-202ENST00000611331 WDR7Q9Y4E6 1490 aa13.42□□□□□ -0.26
LINC01949-202ENST00000611331 HSPA2P54652 639 aa13.42□□□□□ -0.26
LINC01949-202ENST00000611331 CD109Q6YHK3 1445 aa13.42□□□□□ -0.26
LINC01949-202ENST00000611331 CFAP43Q8NDM7 1665 aa13.4□□□□□ -0.26
LINC01949-202ENST00000611331 MADDQ8WXG6 1647 aa13.4□□□□□ -0.26
LINC01949-202ENST00000611331 ZBTB22O15209 634 aa13.39□□□□□ -0.27
LINC01949-202ENST00000611331 BCORL1Q5H9F3 1711 aa13.37□□□□□ -0.27
LINC01949-202ENST00000611331 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
LINC01949-202ENST00000611331 IQGAP2Q13576 1575 aa13.36□□□□□ -0.27
LINC01949-202ENST00000611331 ARAP3Q8WWN8 1544 aa13.35□□□□□ -0.27
LINC01949-202ENST00000611331 IGF1RP08069 1367 aa13.34□□□□□ -0.27
LINC01949-202ENST00000611331 ARID4BQ4LE39 1312 aaPredicted RBP13.34□□□□□ -0.27
LINC01949-202ENST00000611331 KCNH8Q96L42 1107 aa13.33□□□□□ -0.28
LINC01949-202ENST00000611331 RIMS1Q86UR5 1692 aaKnown RBP13.33□□□□□ -0.28
LINC01949-202ENST00000611331 DISP1Q96F81 1524 aa13.33□□□□□ -0.28
LINC01949-202ENST00000611331 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
LINC01949-202ENST00000611331 RNF39Q9H2S5 420 aa13.3□□□□□ -0.28
LINC01949-202ENST00000611331 KIF27Q86VH2 1401 aa13.28□□□□□ -0.28
LINC01949-202ENST00000611331 CARMIL1Q5VZK9 1371 aa13.26□□□□□ -0.29
LINC01949-202ENST00000611331 RAPGEF3O95398 923 aa13.25□□□□□ -0.29
LINC01949-202ENST00000611331 KIAA0556O60303 1618 aa13.24□□□□□ -0.29
LINC01949-202ENST00000611331 PHLDB1Q86UU1 1377 aa13.24□□□□□ -0.29
LINC01949-202ENST00000611331 UGGT2Q9NYU1 1516 aa13.22□□□□□ -0.29
LINC01949-202ENST00000611331 YEATS2Q9ULM3 1422 aa13.2□□□□□ -0.3
LINC01949-202ENST00000611331 FRMPD1Q5SYB0 1578 aa13.19□□□□□ -0.3
LINC01949-202ENST00000611331 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
LINC01949-202ENST00000611331 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
LINC01949-202ENST00000611331 ARHGEF40Q8TER5 1519 aa13.19□□□□□ -0.3
LINC01949-202ENST00000611331 POGZQ7Z3K3 1410 aa13.18□□□□□ -0.3
LINC01949-202ENST00000611331 NEO1Q92859 1461 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms