RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 WASHC2AQ641Q2 1341 aa23.76■■□□□ 1.39
CDK11B-205ENST00000611150 WASHC2CQ9Y4E1 1318 aa23.75■■□□□ 1.39
CDK11B-205ENST00000611150 WIZO95785 1651 aa23.73■■□□□ 1.39
CDK11B-205ENST00000611150 USP35Q9P2H5 1018 aa23.66■■□□□ 1.38
CDK11B-205ENST00000611150 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.38
CDK11B-205ENST00000611150 ERCC6Q03468 1493 aa23.64■■□□□ 1.37
CDK11B-205ENST00000611150 NESP48681 1621 aa23.64■■□□□ 1.37
CDK11B-205ENST00000611150 BRPF3Q9ULD4 1205 aa23.64■■□□□ 1.37
CDK11B-205ENST00000611150 BCL11BQ9C0K0 894 aaPredicted RBP23.63■■□□□ 1.37
CDK11B-205ENST00000611150 RANGAP1P46060 587 aaPredicted RBP23.59■■□□□ 1.37
CDK11B-205ENST00000611150 KCNH8Q96L42 1107 aa23.59■■□□□ 1.37
CDK11B-205ENST00000611150 IPO9Q96P70 1041 aaKnown RBP23.58■■□□□ 1.37
CDK11B-205ENST00000611150 ZBTB47Q9UFB7 747 aaPredicted RBP23.58■■□□□ 1.37
CDK11B-205ENST00000611150 LAMC3Q9Y6N6 1575 aa23.56■■□□□ 1.36
CDK11B-205ENST00000611150 NEFMP07197 916 aa23.55■■□□□ 1.36
CDK11B-205ENST00000611150 FAM43AQ8N2R8 423 aa23.55■■□□□ 1.36
CDK11B-205ENST00000611150 ANP32AP39687 249 aaKnown RBP23.54■■□□□ 1.36
CDK11B-205ENST00000611150 RRP9O43818 475 aaKnown RBP23.52■■□□□ 1.36
CDK11B-205ENST00000611150 HSP90AA2PQ14568 343 aaPredicted RBP23.51■■□□□ 1.35
CDK11B-205ENST00000611150 TAF7LQ5H9L4 462 aa23.5■■□□□ 1.35
CDK11B-205ENST00000611150 EHMT2Q96KQ7 1210 aa23.49■■□□□ 1.35
CDK11B-205ENST00000611150 CUX2O14529 1486 aa23.47■■□□□ 1.35
CDK11B-205ENST00000611150 TOP2AP11388 1531 aaKnown RBP23.47■■□□□ 1.35
CDK11B-205ENST00000611150 CADPSQ9ULU8 1353 aa23.45■■□□□ 1.34
CDK11B-205ENST00000611150 KLHL34Q8N239 644 aa23.43■■□□□ 1.34
CDK11B-205ENST00000611150 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
CDK11B-205ENST00000611150 PPP4R2Q9NY27 417 aa23.4■■□□□ 1.34
CDK11B-205ENST00000611150 NCBP3Q53F19 620 aaKnown RBP23.38■■□□□ 1.33
CDK11B-205ENST00000611150 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
CDK11B-205ENST00000611150 GSE1Q14687 1217 aa23.37■■□□□ 1.33
CDK11B-205ENST00000611150 KIF21AQ7Z4S6 1674 aa23.37■■□□□ 1.33
CDK11B-205ENST00000611150 THOC2Q8NI27 1593 aaKnown RBP23.33■■□□□ 1.33
CDK11B-205ENST00000611150 AEBP2Q6ZN18 517 aaPredicted RBP23.33■■□□□ 1.33
CDK11B-205ENST00000611150 TRIM52Q96A61 297 aa23.32■■□□□ 1.32
CDK11B-205ENST00000611150 HSP90AA1P07900 732 aaKnown RBP23.3■■□□□ 1.32
CDK11B-205ENST00000611150 PPM1GO15355 546 aaPredicted RBP23.29■■□□□ 1.32
CDK11B-205ENST00000611150 ARXQ96QS3 562 aa23.27■■□□□ 1.32
CDK11B-205ENST00000611150 CFTRP13569 1480 aa23.26■■□□□ 1.31
CDK11B-205ENST00000611150 IRX6P78412 446 aaPredicted RBP23.23■■□□□ 1.31
CDK11B-205ENST00000611150 CCDC88BA6NC98 1476 aa23.19■■□□□ 1.3
CDK11B-205ENST00000611150 CCER2I3L3R5 266 aa23.18■■□□□ 1.3
CDK11B-205ENST00000611150 MRC2Q9UBG0 1479 aa23.18■■□□□ 1.3
CDK11B-205ENST00000611150 FANCD2Q9BXW9 1451 aa23.17■■□□□ 1.3
CDK11B-205ENST00000611150 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
CDK11B-205ENST00000611150 LAS1LQ9Y4W2 734 aaKnown RBP23.16■■□□□ 1.3
CDK11B-205ENST00000611150 CALD1Q05682 793 aaKnown RBP23.14■■□□□ 1.29
CDK11B-205ENST00000611150 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
CDK11B-205ENST00000611150 PRDM4Q9UKN5 801 aa23.12■■□□□ 1.29
CDK11B-205ENST00000611150 ZNF326Q5BKZ1 582 aaKnown RBP23.11■■□□□ 1.29
CDK11B-205ENST00000611150 WDR62O43379 1518 aa23.11■■□□□ 1.29
CDK11B-205ENST00000611150 NAP1L5Q96NT1 182 aaPredicted RBP23.1■■□□□ 1.29
CDK11B-205ENST00000611150 FRAT1Q92837 279 aaPredicted RBP23.09■■□□□ 1.29
CDK11B-205ENST00000611150 B4GALNT3Q6L9W6 998 aa23.08■■□□□ 1.29
CDK11B-205ENST00000611150 NAP1L2Q9ULW6 460 aaPredicted RBP23.08■■□□□ 1.29
CDK11B-205ENST00000611150 PRDM2Q13029 1718 aa23.08■■□□□ 1.28
CDK11B-205ENST00000611150 EEA1Q15075 1411 aa23.05■■□□□ 1.28
CDK11B-205ENST00000611150 CENPJQ9HC77 1338 aaPredicted RBP23.04■■□□□ 1.28
CDK11B-205ENST00000611150 BBXQ8WY36 941 aaPredicted RBP23.03■■□□□ 1.28
CDK11B-205ENST00000611150 DNAJC5Q9H3Z4 198 aa23.01■■□□□ 1.27
CDK11B-205ENST00000611150 RSPH4AQ5TD94 716 aa23■■□□□ 1.27
CDK11B-205ENST00000611150 PAXIP1Q6ZW49 1069 aaPredicted RBP23■■□□□ 1.27
CDK11B-205ENST00000611150 RGS3P49796 1198 aa22.98■■□□□ 1.27
CDK11B-205ENST00000611150 PNNQ9H307 717 aaKnown RBP22.97■■□□□ 1.27
CDK11B-205ENST00000611150 RRAGDQ9NQL2 400 aaPredicted RBP22.97■■□□□ 1.27
CDK11B-205ENST00000611150 URB2Q14146 1524 aaKnown RBP22.95■■□□□ 1.27
CDK11B-205ENST00000611150 DCAF11Q8TEB1 546 aa22.94■■□□□ 1.26
CDK11B-205ENST00000611150 PDCL3Q9H2J4 239 aa22.94■■□□□ 1.26
CDK11B-205ENST00000611150 ANP32CO43423 234 aa22.94■■□□□ 1.26
CDK11B-205ENST00000611150 DDX10Q13206 875 aaKnown RBP22.93■■□□□ 1.26
CDK11B-205ENST00000611150 IPO4Q8TEX9 1081 aaKnown RBP22.9■■□□□ 1.26
CDK11B-205ENST00000611150 CHMP4BQ9H444 224 aaKnown RBP22.9■■□□□ 1.26
CDK11B-205ENST00000611150 CANXP27824 592 aaKnown RBP22.89■■□□□ 1.25
CDK11B-205ENST00000611150 NFKBIBQ15653 356 aa22.89■■□□□ 1.25
CDK11B-205ENST00000611150 GTF2E1P29083 439 aaPredicted RBP22.88■■□□□ 1.25
CDK11B-205ENST00000611150 DHX57Q6P158 1386 aaKnown RBP22.87■■□□□ 1.25
CDK11B-205ENST00000611150 HNRNPUQ00839 825 aaKnown RBP eCLIP22.85■■□□□ 1.25
CDK11B-205ENST00000611150 CEP162Q5TB80 1403 aa22.84■■□□□ 1.25
CDK11B-205ENST00000611150 NPM2Q86SE8 214 aaKnown RBP22.83■■□□□ 1.24
CDK11B-205ENST00000611150 CNGB1Q14028 1251 aaPredicted RBP22.82■■□□□ 1.24
CDK11B-205ENST00000611150 CLCN1P35523 988 aa22.82■■□□□ 1.24
CDK11B-205ENST00000611150 PPP1R15AO75807 674 aaPredicted RBP22.81■■□□□ 1.24
CDK11B-205ENST00000611150 NCLP19338 710 aaKnown RBP22.79■■□□□ 1.24
CDK11B-205ENST00000611150 BRD2P25440 801 aaKnown RBP22.79■■□□□ 1.24
CDK11B-205ENST00000611150 STAC3Q96MF2 364 aa22.79■■□□□ 1.24
CDK11B-205ENST00000611150 TOPBP1Q92547 1522 aa22.78■■□□□ 1.24
CDK11B-205ENST00000611150 ABCC8Q09428 1581 aa22.78■■□□□ 1.24
CDK11B-205ENST00000611150 DDRGK1Q96HY6 314 aa22.75■■□□□ 1.23
CDK11B-205ENST00000611150 DNMBPQ6XZF7 1577 aa22.74■■□□□ 1.23
CDK11B-205ENST00000611150 TPM2P07951 284 aa22.7■■□□□ 1.22
CDK11B-205ENST00000611150 IFT140Q96RY7 1462 aa22.69■■□□□ 1.22
CDK11B-205ENST00000611150 L1TD1Q5T7N2 865 aaKnown RBP22.69■■□□□ 1.22
CDK11B-205ENST00000611150 DHX37Q8IY37 1157 aaKnown RBP22.62■■□□□ 1.21
CDK11B-205ENST00000611150 SMAP1Q8IYB5 467 aaPredicted RBP22.62■■□□□ 1.21
CDK11B-205ENST00000611150 ZNF608Q9ULD9 1512 aaPredicted RBP22.6■■□□□ 1.21
CDK11B-205ENST00000611150 CHMP4AQ9BY43 222 aa22.6■■□□□ 1.21
CDK11B-205ENST00000611150 FTSJ3Q8IY81 847 aaKnown RBP22.58■■□□□ 1.21
CDK11B-205ENST00000611150 TNIKQ9UKE5 1360 aa22.58■■□□□ 1.21
CDK11B-205ENST00000611150 TCERG1O14776 1098 aaKnown RBP22.58■■□□□ 1.21
CDK11B-205ENST00000611150 POLA1P09884 1462 aaPredicted RBP22.57■■□□□ 1.2
CDK11B-205ENST00000611150 PDE4AP27815 886 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms