RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 CCNB3Q8WWL7 1395 aa13.25□□□□□ -0.29
TPM1-233ENST00000610733 FBLN2P98095 1184 aa13.25□□□□□ -0.29
TPM1-233ENST00000610733 MRS2Q9HD23 443 aa13.25□□□□□ -0.29
TPM1-233ENST00000610733 B4GALNT3Q6L9W6 998 aa13.24□□□□□ -0.29
TPM1-233ENST00000610733 RAB3GAP2Q9H2M9 1393 aa13.23□□□□□ -0.29
TPM1-233ENST00000610733 BAZ1BQ9UIG0 1483 aaKnown RBP13.21□□□□□ -0.29
TPM1-233ENST00000610733 RTL5Q5HYW3 569 aaPredicted RBP13.18□□□□□ -0.3
TPM1-233ENST00000610733 KDM2AQ9Y2K7 1162 aa13.18□□□□□ -0.3
TPM1-233ENST00000610733 MTUS2Q5JR59 1369 aa13.17□□□□□ -0.3
TPM1-233ENST00000610733 TOP2AP11388 1531 aaKnown RBP13.16□□□□□ -0.3
TPM1-233ENST00000610733 CLSPNQ9HAW4 1339 aa13.15□□□□□ -0.3
TPM1-233ENST00000610733 MYT1LQ9UL68 1186 aa13.14□□□□□ -0.31
TPM1-233ENST00000610733 SMARCA2P51531 1590 aa13.12□□□□□ -0.31
TPM1-233ENST00000610733 CCDC136Q96JN2 1154 aa13.12□□□□□ -0.31
TPM1-233ENST00000610733 SLC4A1APQ9BWU0 796 aaKnown RBP13.12□□□□□ -0.31
TPM1-233ENST00000610733 KIF27Q86VH2 1401 aa13.12□□□□□ -0.31
TPM1-233ENST00000610733 DAXXQ9UER7 740 aaPredicted RBP13.1□□□□□ -0.31
TPM1-233ENST00000610733 EIF4G2P78344 907 aaKnown RBP eCLIP13.09□□□□□ -0.31
TPM1-233ENST00000610733 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
TPM1-233ENST00000610733 CUX2O14529 1486 aa13.08□□□□□ -0.32
TPM1-233ENST00000610733 SMARCA4P51532 1647 aa13.07□□□□□ -0.32
TPM1-233ENST00000610733 PPP1R15AO75807 674 aaPredicted RBP13.07□□□□□ -0.32
TPM1-233ENST00000610733 HSPA5P11021 654 aaKnown RBP13.07□□□□□ -0.32
TPM1-233ENST00000610733 SETD5Q9C0A6 1442 aa13.06□□□□□ -0.32
TPM1-233ENST00000610733 SENP3Q9H4L4 574 aaPredicted RBP13.06□□□□□ -0.32
TPM1-233ENST00000610733 TMC1Q8TDI8 760 aa13.05□□□□□ -0.32
TPM1-233ENST00000610733 ANP32AP39687 249 aaKnown RBP13.05□□□□□ -0.32
TPM1-233ENST00000610733 CARMIL1Q5VZK9 1371 aa13.04□□□□□ -0.32
TPM1-233ENST00000610733 KIF21BO75037 1637 aa13.02□□□□□ -0.32
TPM1-233ENST00000610733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.332e-8■□□□□ 10.9
TPM1-233ENST00000610733 SYNJ1O43426 1573 aa13.02□□□□□ -0.33
TPM1-233ENST00000610733 RGL3Q3MIN7 710 aa13.01□□□□□ -0.33
TPM1-233ENST00000610733 LAS1LQ9Y4W2 734 aaKnown RBP13.01□□□□□ -0.33
TPM1-233ENST00000610733 FHOD3Q2V2M9 1422 aa13.01□□□□□ -0.33
TPM1-233ENST00000610733 ARXQ96QS3 562 aa13□□□□□ -0.33
TPM1-233ENST00000610733 ARAP1Q96P48 1450 aa13□□□□□ -0.33
TPM1-233ENST00000610733 CCDC184Q52MB2 194 aa12.98□□□□□ -0.33
TPM1-233ENST00000610733 PHLDB1Q86UU1 1377 aa12.97□□□□□ -0.33
TPM1-233ENST00000610733 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
TPM1-233ENST00000610733 ATAD2BQ9ULI0 1458 aa12.95□□□□□ -0.34
TPM1-233ENST00000610733 L3MBTL2Q969R5 705 aa12.95□□□□□ -0.34
TPM1-233ENST00000610733 PPP4R2Q9NY27 417 aa12.94□□□□□ -0.34
TPM1-233ENST00000610733 TDRD9Q8NDG6 1382 aaKnown RBP12.93□□□□□ -0.34
TPM1-233ENST00000610733 CCER2I3L3R5 266 aa12.93□□□□□ -0.34
TPM1-233ENST00000610733 DEKP35659 375 aaKnown RBP12.93□□□□□ -0.34
TPM1-233ENST00000610733 EIF5BO60841 1220 aaKnown RBP12.92□□□□□ -0.34
TPM1-233ENST00000610733 MSH5O43196 834 aa12.88□□□□□ -0.35
TPM1-233ENST00000610733 CC2D1BQ5T0F9 858 aaKnown RBP12.88□□□□□ -0.35
TPM1-233ENST00000610733 MPHOSPH9Q99550 1183 aa12.87□□□□□ -0.35
TPM1-233ENST00000610733 NOP58Q9Y2X3 529 aaKnown RBP12.87□□□□□ -0.35
TPM1-233ENST00000610733 WDR97A6NE52 1622 aa12.87□□□□□ -0.35
TPM1-233ENST00000610733 ARHGAP35Q9NRY4 1499 aa12.87□□□□□ -0.35
TPM1-233ENST00000610733 CARD11Q9BXL7 1154 aa12.86□□□□□ -0.35
TPM1-233ENST00000610733 IGF1RP08069 1367 aa12.84□□□□□ -0.35
TPM1-233ENST00000610733 WASHC2AQ641Q2 1341 aa12.84□□□□□ -0.35
TPM1-233ENST00000610733 EIF4G1Q04637 1599 aaKnown RBP12.83□□□□□ -0.36
TPM1-233ENST00000610733 CANXP27824 592 aaKnown RBP12.83□□□□□ -0.36
TPM1-233ENST00000610733 CFDP1Q9UEE9 299 aaPredicted RBP12.82□□□□□ -0.36
TPM1-233ENST00000610733 DCAF11Q8TEB1 546 aa12.82□□□□□ -0.36
TPM1-233ENST00000610733 ZNF644Q9H582 1327 aaPredicted RBP12.82□□□□□ -0.36
TPM1-233ENST00000610733 FHAD1B1AJZ9 1412 aa12.81□□□□□ -0.36
TPM1-233ENST00000610733 RGS3P49796 1198 aa12.81□□□□□ -0.36
TPM1-233ENST00000610733 PRKRIP1Q9H875 184 aaPredicted RBP12.81□□□□□ -0.36
TPM1-233ENST00000610733 PLIN1O60240 522 aa12.81□□□□□ -0.36
TPM1-233ENST00000610733 NEFMP07197 916 aa12.8□□□□□ -0.36
TPM1-233ENST00000610733 PAK3O75914 559 aaPredicted RBP12.79□□□□□ -0.36
TPM1-233ENST00000610733 SLC4A3P48751 1232 aa12.79□□□□□ -0.36
TPM1-233ENST00000610733 PKD2Q13563 968 aa12.79□□□□□ -0.36
TPM1-233ENST00000610733 C11orf95C9JLR9 678 aaPredicted RBP12.79□□□□□ -0.36
TPM1-233ENST00000610733 NEUROD2Q15784 382 aa12.78□□□□□ -0.36
TPM1-233ENST00000610733 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.78□□□□□ -0.36
TPM1-233ENST00000610733 CHGAP10645 457 aaKnown RBP12.78□□□□□ -0.36
TPM1-233ENST00000610733 SKAP1Q86WV1 359 aa12.78□□□□□ -0.36
TPM1-233ENST00000610733 RAD54L2Q9Y4B4 1467 aa12.77□□□□□ -0.37
TPM1-233ENST00000610733 TIMELESSQ9UNS1 1208 aa12.77□□□□□ -0.37
TPM1-233ENST00000610733 RRBP1Q9P2E9 1410 aaKnown RBP12.77□□□□□ -0.37
TPM1-233ENST00000610733 TSPY4P0CV99 314 aa12.76□□□□□ -0.37
TPM1-233ENST00000610733 TSPY10P0CW01 314 aa12.76□□□□□ -0.37
TPM1-233ENST00000610733 TNNT2P45379 298 aaPredicted RBP12.76□□□□□ -0.37
TPM1-233ENST00000610733 CCDC18Q5T9S5 1454 aa12.75□□□□□ -0.37
TPM1-233ENST00000610733 CHMP7Q8WUX9 453 aaPredicted RBP12.74□□□□□ -0.37
TPM1-233ENST00000610733 PRXQ9BXM0 1461 aa12.73□□□□□ -0.37
TPM1-233ENST00000610733 LRRC9Q6ZRR7 1453 aa12.73□□□□□ -0.37
TPM1-233ENST00000610733 NBPF8Q3BBV2 869 aa12.72□□□□□ -0.37
TPM1-233ENST00000610733 EXOC6Q8TAG9 804 aa12.72□□□□□ -0.37
TPM1-233ENST00000610733 ST20-MTHFSA0A0A6YYL1 179 aa12.71□□□□□ -0.38
TPM1-233ENST00000610733 WDR43Q15061 677 aaKnown RBP eCLIP12.7□□□□□ -0.38
TPM1-233ENST00000610733 AKNAQ7Z591 1439 aa12.7□□□□□ -0.38
TPM1-233ENST00000610733 KIF7Q2M1P5 1343 aa12.69□□□□□ -0.38
TPM1-233ENST00000610733 FGD5Q6ZNL6 1462 aa12.69□□□□□ -0.38
TPM1-233ENST00000610733 FMN1Q68DA7 1419 aa12.69□□□□□ -0.38
TPM1-233ENST00000610733 CUX1P39880 1505 aa12.68□□□□□ -0.38
TPM1-233ENST00000610733 SPRYD3Q8NCJ5 442 aa12.68□□□□□ -0.38
TPM1-233ENST00000610733 NUDCQ9Y266 331 aa12.67□□□□□ -0.38
TPM1-233ENST00000610733 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
TPM1-233ENST00000610733 ANO8Q9HCE9 1232 aaPredicted RBP12.67□□□□□ -0.38
TPM1-233ENST00000610733 DNAJC5BQ9UF47 199 aa12.67□□□□□ -0.38
TPM1-233ENST00000610733 RCAN3Q9UKA8 241 aa12.66□□□□□ -0.38
TPM1-233ENST00000610733 FGD6Q6ZV73 1430 aa12.66□□□□□ -0.38
TPM1-233ENST00000610733 UBE2Q2Q8WVN8 375 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms