RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 RSF1Q96T23 1441 aaPredicted RBP12.16□□□□□ -0.46
COL25A1-208ENST00000610288 PPM1GO15355 546 aaPredicted RBP12.16□□□□□ -0.46
COL25A1-208ENST00000610288 CHGAP10645 457 aaKnown RBP12.15□□□□□ -0.46
COL25A1-208ENST00000610288 RBM19Q9Y4C8 960 aaKnown RBP12.15□□□□□ -0.46
COL25A1-208ENST00000610288 CHMP7Q8WUX9 453 aaPredicted RBP12.15□□□□□ -0.46
COL25A1-208ENST00000610288 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.15□□□□□ -0.46
COL25A1-208ENST00000610288 NOP58Q9Y2X3 529 aaKnown RBP12.15□□□□□ -0.46
COL25A1-208ENST00000610288 NCLP19338 710 aaKnown RBP12.14□□□□□ -0.47
COL25A1-208ENST00000610288 EIF4G2P78344 907 aaKnown RBP eCLIP12.13□□□□□ -0.47
COL25A1-208ENST00000610288 TSHZ2Q9NRE2 1034 aa12.13□□□□□ -0.47
COL25A1-208ENST00000610288 HIRIP3Q9BW71 556 aaPredicted RBP12.12□□□□□ -0.47
COL25A1-208ENST00000610288 SALL2Q9Y467 1007 aaPredicted RBP12.11□□□□□ -0.47
COL25A1-208ENST00000610288 HSP90AA1P07900 732 aaKnown RBP12.11□□□□□ -0.47
COL25A1-208ENST00000610288 MTUS2Q5JR59 1369 aa12.11□□□□□ -0.47
COL25A1-208ENST00000610288 STAG3Q9UJ98 1225 aa12.1□□□□□ -0.47
COL25A1-208ENST00000610288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL25A1-208ENST00000610288 TSPY4P0CV99 314 aa12.08□□□□□ -0.48
COL25A1-208ENST00000610288 TSPY10P0CW01 314 aa12.08□□□□□ -0.48
COL25A1-208ENST00000610288 NAP1L5Q96NT1 182 aaPredicted RBP12.08□□□□□ -0.48
COL25A1-208ENST00000610288 CCER2I3L3R5 266 aa12.07□□□□□ -0.48
COL25A1-208ENST00000610288 TRIM44Q96DX7 344 aaPredicted RBP12.06□□□□□ -0.48
COL25A1-208ENST00000610288 KDM2AQ9Y2K7 1162 aa12.05□□□□□ -0.48
COL25A1-208ENST00000610288 CDK11BP21127 795 aaKnown RBP12.05□□□□□ -0.48
COL25A1-208ENST00000610288 BECN1Q14457 450 aa12.05□□□□□ -0.48
COL25A1-208ENST00000610288 CEP164Q9UPV0 1460 aa12.04□□□□□ -0.48
COL25A1-208ENST00000610288 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.03□□□□□ -0.48
COL25A1-208ENST00000610288 TIMELESSQ9UNS1 1208 aa12.03□□□□□ -0.48
COL25A1-208ENST00000610288 RB1CC1Q8TDY2 1594 aa12.01□□□□□ -0.49
COL25A1-208ENST00000610288 ARXQ96QS3 562 aa12.01□□□□□ -0.49
COL25A1-208ENST00000610288 RRP7BPQ9NSQ0 103 aa12.01□□□□□ -0.49
COL25A1-208ENST00000610288 WDR43Q15061 677 aaKnown RBP eCLIP11.99□□□□□ -0.49
COL25A1-208ENST00000610288 B4GALNT3Q6L9W6 998 aa11.99□□□□□ -0.49
COL25A1-208ENST00000610288 KCNH8Q96L42 1107 aa11.98□□□□□ -0.49
COL25A1-208ENST00000610288 LAS1LQ9Y4W2 734 aaKnown RBP11.98□□□□□ -0.49
COL25A1-208ENST00000610288 RSPH6AQ9H0K4 717 aa11.97□□□□□ -0.49
COL25A1-208ENST00000610288 WRNQ14191 1432 aaPredicted RBP eCLIP11.96□□□□□ -0.5
COL25A1-208ENST00000610288 PKNOX2Q96KN3 472 aa11.96□□□□□ -0.5
COL25A1-208ENST00000610288 TRHP20396 242 aaPredicted RBP11.95□□□□□ -0.5
COL25A1-208ENST00000610288 SIN3AQ96ST3 1273 aa11.94□□□□□ -0.5
COL25A1-208ENST00000610288 CCNB3Q8WWL7 1395 aa11.94□□□□□ -0.5
COL25A1-208ENST00000610288 ERCC6Q03468 1493 aa11.93□□□□□ -0.5
COL25A1-208ENST00000610288 VSIG10Q8N0Z9 540 aa11.92□□□□□ -0.5
COL25A1-208ENST00000610288 PODXL2Q9NZ53 605 aa11.91□□□□□ -0.5
COL25A1-208ENST00000610288 PLEKHD1A6NEE1 506 aa11.91□□□□□ -0.5
COL25A1-208ENST00000610288 GOLGA6L22H0YM25 854 aa11.9□□□□□ -0.5
COL25A1-208ENST00000610288 VPS8Q8N3P4 1428 aa11.9□□□□□ -0.5
COL25A1-208ENST00000610288 ARID4BQ4LE39 1312 aaPredicted RBP11.9□□□□□ -0.51
COL25A1-208ENST00000610288 KIF27Q86VH2 1401 aa11.88□□□□□ -0.51
COL25A1-208ENST00000610288 L1TD1Q5T7N2 865 aaKnown RBP11.88□□□□□ -0.51
COL25A1-208ENST00000610288 RGL3Q3MIN7 710 aa11.88□□□□□ -0.51
COL25A1-208ENST00000610288 SENP3Q9H4L4 574 aaPredicted RBP11.88□□□□□ -0.51
COL25A1-208ENST00000610288 BAZ1BQ9UIG0 1483 aaKnown RBP11.87□□□□□ -0.51
COL25A1-208ENST00000610288 HSP90AA2PQ14568 343 aaPredicted RBP11.86□□□□□ -0.51
COL25A1-208ENST00000610288 CFDP1Q9UEE9 299 aaPredicted RBP11.86□□□□□ -0.51
COL25A1-208ENST00000610288 PNNQ9H307 717 aaKnown RBP11.85□□□□□ -0.51
COL25A1-208ENST00000610288 FANCIQ9NVI1 1328 aa11.84□□□□□ -0.51
COL25A1-208ENST00000610288 IPO9Q96P70 1041 aaKnown RBP11.84□□□□□ -0.51
COL25A1-208ENST00000610288 SETD5Q9C0A6 1442 aa11.83□□□□□ -0.52
COL25A1-208ENST00000610288 NACADO15069 1562 aa11.83□□□□□ -0.52
COL25A1-208ENST00000610288 SOGA1O94964 1423 aa11.83□□□□□ -0.52
COL25A1-208ENST00000610288 TCERG1O14776 1098 aaKnown RBP11.83□□□□□ -0.52
COL25A1-208ENST00000610288 PLEKHG5O94827 1062 aa11.83□□□□□ -0.52
COL25A1-208ENST00000610288 SENP3-EIF4A1A0A087X0R7 540 aa11.82□□□□□ -0.52
COL25A1-208ENST00000610288 ANO8Q9HCE9 1232 aaPredicted RBP11.82□□□□□ -0.52
COL25A1-208ENST00000610288 RGS3P49796 1198 aa11.8□□□□□ -0.52
COL25A1-208ENST00000610288 CARD11Q9BXL7 1154 aa11.8□□□□□ -0.52
COL25A1-208ENST00000610288 C14orf37Q86TY3 774 aa11.8□□□□□ -0.52
COL25A1-208ENST00000610288 MYH16Q9H6N6 1097 aa11.8□□□□□ -0.52
COL25A1-208ENST00000610288 USP35Q9P2H5 1018 aa11.8□□□□□ -0.52
COL25A1-208ENST00000610288 A0A0G2JS52 829 aa11.79□□□□□ -0.52
COL25A1-208ENST00000610288 PPP1R15AO75807 674 aaPredicted RBP11.78□□□□□ -0.52
COL25A1-208ENST00000610288 KNSTRNQ9Y448 316 aa11.78□□□□□ -0.52
COL25A1-208ENST00000610288 CDCA8Q53HL2 280 aa11.78□□□□□ -0.52
COL25A1-208ENST00000610288 FHAD1B1AJZ9 1412 aa11.77□□□□□ -0.53
COL25A1-208ENST00000610288 BAZ1AQ9NRL2 1556 aaPredicted RBP11.76□□□□□ -0.53
COL25A1-208ENST00000610288 CECR2Q9BXF3 1484 aa11.76□□□□□ -0.53
COL25A1-208ENST00000610288 RAB3GAP2Q9H2M9 1393 aa11.76□□□□□ -0.53
COL25A1-208ENST00000610288 PTMAP06454 111 aaKnown RBP11.76□□□□□ -0.53
COL25A1-208ENST00000610288 HSPA5P11021 654 aaKnown RBP11.76□□□□□ -0.53
COL25A1-208ENST00000610288 CFAP53Q96M91 514 aa11.75□□□□□ -0.53
COL25A1-208ENST00000610288 UBE2Q2Q8WVN8 375 aa11.73□□□□□ -0.53
COL25A1-208ENST00000610288 DNTTIP2Q5QJE6 756 aaKnown RBP11.73□□□□□ -0.53
COL25A1-208ENST00000610288 DHX57Q6P158 1386 aaKnown RBP11.73□□□□□ -0.53
COL25A1-208ENST00000610288 NUDCQ9Y266 331 aa11.73□□□□□ -0.53
COL25A1-208ENST00000610288 ZBTB7CA1YPR0 619 aa11.71□□□□□ -0.53
COL25A1-208ENST00000610288 KANK4Q5T7N3 995 aaPredicted RBP11.71□□□□□ -0.53
COL25A1-208ENST00000610288 RCAN3Q9UKA8 241 aa11.71□□□□□ -0.54
COL25A1-208ENST00000610288 CCDC88BA6NC98 1476 aa11.7□□□□□ -0.54
COL25A1-208ENST00000610288 CARMIL1Q5VZK9 1371 aa11.7□□□□□ -0.54
COL25A1-208ENST00000610288 NEUROD2Q15784 382 aa11.7□□□□□ -0.54
COL25A1-208ENST00000610288 MSNP26038 577 aaKnown RBP11.7□□□□□ -0.54
COL25A1-208ENST00000610288 FTSJ3Q8IY81 847 aaKnown RBP11.7□□□□□ -0.54
COL25A1-208ENST00000610288 MS4A1P11836 297 aa11.69□□□□□ -0.54
COL25A1-208ENST00000610288 A0A0U1RQG5 324 aaPredicted RBP11.68□□□□□ -0.54
COL25A1-208ENST00000610288 HSCBQ8IWL3 235 aa11.68□□□□□ -0.54
COL25A1-208ENST00000610288 HSP90AB1P08238 724 aaKnown RBP11.68□□□□□ -0.54
COL25A1-208ENST00000610288 MLECQ14165 292 aa11.68□□□□□ -0.54
COL25A1-208ENST00000610288 CUX2O14529 1486 aa11.67□□□□□ -0.54
COL25A1-208ENST00000610288 AMER1Q5JTC6 1135 aaPredicted RBP11.67□□□□□ -0.54
COL25A1-208ENST00000610288 HAP1P54257 671 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms