RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 ERCC6L2Q5T890 1561 aa25.75■■□□□ 1.71
LMBR1-220ENST00000609081 KIAA0586Q9BVV6 1533 aa25.75■■□□□ 1.71
LMBR1-220ENST00000609081 PRG4Q92954 1404 aaPredicted RBP25.72■■□□□ 1.71
LMBR1-220ENST00000609081 RAPGEF2Q9Y4G8 1499 aa25.62■■□□□ 1.69
LMBR1-220ENST00000609081 TRHP20396 242 aaPredicted RBP25.59■■□□□ 1.69
LMBR1-220ENST00000609081 IQGAP2Q13576 1575 aa25.56■■□□□ 1.68
LMBR1-220ENST00000609081 CARMIL2Q6F5E8 1435 aa25.52■■□□□ 1.68
LMBR1-220ENST00000609081 PRXQ9BXM0 1461 aa25.47■■□□□ 1.67
LMBR1-220ENST00000609081 EEA1Q15075 1411 aa25.43■■□□□ 1.66
LMBR1-220ENST00000609081 TNIKQ9UKE5 1360 aa25.42■■□□□ 1.66
LMBR1-220ENST00000609081 UGGT2Q9NYU1 1516 aa25.42■■□□□ 1.66
LMBR1-220ENST00000609081 CTTNBP2Q8WZ74 1663 aa25.42■■□□□ 1.66
LMBR1-220ENST00000609081 PTPRGP23470 1445 aa25.4■■□□□ 1.66
LMBR1-220ENST00000609081 NPM1P06748 294 aaKnown RBP eCLIP25.39■■□□□ 1.66
LMBR1-220ENST00000609081 ADCY10Q96PN6 1610 aa25.37■■□□□ 1.65
LMBR1-220ENST00000609081 CSRNP3Q8WYN3 585 aa25.36■■□□□ 1.65
LMBR1-220ENST00000609081 DISP1Q96F81 1524 aa25.36■■□□□ 1.65
LMBR1-220ENST00000609081 MAPKBP1O60336 1514 aa25.33■■□□□ 1.65
LMBR1-220ENST00000609081 KIAA0556O60303 1618 aa25.3■■□□□ 1.64
LMBR1-220ENST00000609081 GOLGA3Q08378 1498 aa25.3■■□□□ 1.64
LMBR1-220ENST00000609081 UHRF1BP1LA0JNW5 1464 aa25.27■■□□□ 1.64
LMBR1-220ENST00000609081 KIF13AQ9H1H9 1805 aa25.24■■□□□ 1.63
LMBR1-220ENST00000609081 ABCC2Q92887 1545 aa25.24■■□□□ 1.63
LMBR1-220ENST00000609081 UACAQ9BZF9 1416 aa25.24■■□□□ 1.63
LMBR1-220ENST00000609081 ABCC10Q5T3U5 1492 aa25.22■■□□□ 1.63
LMBR1-220ENST00000609081 TTBK1Q5TCY1 1321 aaPredicted RBP25.2■■□□□ 1.62
LMBR1-220ENST00000609081 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.62
LMBR1-220ENST00000609081 DIP2BQ9P265 1576 aa25.16■■□□□ 1.62
LMBR1-220ENST00000609081 KIF21BO75037 1637 aa25.14■■□□□ 1.61
LMBR1-220ENST00000609081 FAM69CQ0P6D2 419 aa25.13■■□□□ 1.61
LMBR1-220ENST00000609081 FAM9AQ8IZU1 332 aaPredicted RBP25.13■■□□□ 1.61
LMBR1-220ENST00000609081 KDM5BQ9UGL1 1544 aa25.12■■□□□ 1.61
LMBR1-220ENST00000609081 PLB1Q6P1J6 1458 aa25.12■■□□□ 1.61
LMBR1-220ENST00000609081 ASXL2Q76L83 1435 aa25.06■■□□□ 1.6
LMBR1-220ENST00000609081 SAMD9Q5K651 1589 aa25.05■■□□□ 1.6
LMBR1-220ENST00000609081 ABCA8O94911 1581 aa25.05■■□□□ 1.6
LMBR1-220ENST00000609081 ZCCHC11Q5TAX3 1644 aaKnown RBP25.04■■□□□ 1.6
LMBR1-220ENST00000609081 GLI2P10070 1586 aa25.01■■□□□ 1.59
LMBR1-220ENST00000609081 EFCAB5A4FU69 1503 aa24.95■■□□□ 1.58
LMBR1-220ENST00000609081 EPRSP07814 1512 aaKnown RBP24.93■■□□□ 1.58
LMBR1-220ENST00000609081 TSPOAP1O95153 1857 aa24.92■■□□□ 1.58
LMBR1-220ENST00000609081 WDR7Q9Y4E6 1490 aa24.92■■□□□ 1.58
LMBR1-220ENST00000609081 P3H3Q8IVL6 736 aa24.92■■□□□ 1.58
LMBR1-220ENST00000609081 RAPGEF6Q8TEU7 1601 aa24.87■■□□□ 1.57
LMBR1-220ENST00000609081 UBTFP17480 764 aaKnown RBP24.87■■□□□ 1.57
LMBR1-220ENST00000609081 MAP3K4Q9Y6R4 1608 aa24.86■■□□□ 1.57
LMBR1-220ENST00000609081 KDM6BO15054 1643 aa24.84■■□□□ 1.57
LMBR1-220ENST00000609081 PPRC1Q5VV67 1664 aaKnown RBP24.82■■□□□ 1.56
LMBR1-220ENST00000609081 FHOD3Q2V2M9 1422 aa24.82■■□□□ 1.56
LMBR1-220ENST00000609081 TEX14Q8IWB6 1497 aa24.82■■□□□ 1.56
LMBR1-220ENST00000609081 RANGAP1P46060 587 aaPredicted RBP24.81■■□□□ 1.56
LMBR1-220ENST00000609081 ATP10BO94823 1461 aa24.81■■□□□ 1.56
LMBR1-220ENST00000609081 CFAP43Q8NDM7 1665 aa24.78■■□□□ 1.56
LMBR1-220ENST00000609081 NUP153P49790 1475 aaKnown RBP24.75■■□□□ 1.55
LMBR1-220ENST00000609081 MAGI3Q5TCQ9 1506 aa24.72■■□□□ 1.55
LMBR1-220ENST00000609081 KCNH8Q96L42 1107 aa24.72■■□□□ 1.55
LMBR1-220ENST00000609081 FMN1Q68DA7 1419 aa24.71■■□□□ 1.55
LMBR1-220ENST00000609081 CD109Q6YHK3 1445 aa24.71■■□□□ 1.55
LMBR1-220ENST00000609081 EHMT2Q96KQ7 1210 aa24.7■■□□□ 1.54
LMBR1-220ENST00000609081 ARHGAP35Q9NRY4 1499 aa24.69■■□□□ 1.54
LMBR1-220ENST00000609081 ARID3CA6NKF2 412 aa24.68■■□□□ 1.54
LMBR1-220ENST00000609081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.67■■□□□ 1.54
LMBR1-220ENST00000609081 HNRNPUL2Q1KMD3 747 aaKnown RBP24.67■■□□□ 1.54
LMBR1-220ENST00000609081 ABCA9Q8IUA7 1624 aa24.65■■□□□ 1.54
LMBR1-220ENST00000609081 PLEKHD1A6NEE1 506 aa24.62■■□□□ 1.53
LMBR1-220ENST00000609081 HECW1Q76N89 1606 aa24.6■■□□□ 1.53
LMBR1-220ENST00000609081 PHLDB1Q86UU1 1377 aa24.58■■□□□ 1.53
LMBR1-220ENST00000609081 COL17A1Q9UMD9 1497 aaPredicted RBP24.57■■□□□ 1.52
LMBR1-220ENST00000609081 AEBP2Q6ZN18 517 aaPredicted RBP24.54■■□□□ 1.52
LMBR1-220ENST00000609081 ARAP3Q8WWN8 1544 aa24.51■■□□□ 1.51
LMBR1-220ENST00000609081 CDK11AQ9UQ88 783 aaPredicted RBP24.51■■□□□ 1.51
LMBR1-220ENST00000609081 CDK13Q14004 1512 aaKnown RBP24.51■■□□□ 1.51
LMBR1-220ENST00000609081 NEO1Q92859 1461 aa24.5■■□□□ 1.51
LMBR1-220ENST00000609081 ATP1B4Q9UN42 357 aaPredicted RBP24.47■■□□□ 1.51
LMBR1-220ENST00000609081 CLIP1P30622 1438 aa24.46■■□□□ 1.51
LMBR1-220ENST00000609081 CASKIN1Q8WXD9 1431 aa24.45■■□□□ 1.51
LMBR1-220ENST00000609081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.45■■□□□ 1.5
LMBR1-220ENST00000609081 CFAP74Q9C0B2 1584 aa24.43■■□□□ 1.5
LMBR1-220ENST00000609081 CCDC18Q5T9S5 1454 aa24.43■■□□□ 1.5
LMBR1-220ENST00000609081 PCF11O94913 1555 aaKnown RBP24.4■■□□□ 1.5
LMBR1-220ENST00000609081 FYCO1Q9BQS8 1478 aa24.39■■□□□ 1.5
LMBR1-220ENST00000609081 TTC37Q6PGP7 1564 aa24.39■■□□□ 1.5
LMBR1-220ENST00000609081 TROQ12816 1431 aaPredicted RBP24.38■■□□□ 1.49
LMBR1-220ENST00000609081 LRRIQ1Q96JM4 1722 aa24.38■■□□□ 1.49
LMBR1-220ENST00000609081 FANCAO15360 1455 aa24.37■■□□□ 1.49
LMBR1-220ENST00000609081 KIF14Q15058 1648 aa24.36■■□□□ 1.49
LMBR1-220ENST00000609081 PLCH2O75038 1416 aa24.33■■□□□ 1.49
LMBR1-220ENST00000609081 AKNAQ7Z591 1439 aa24.33■■□□□ 1.49
LMBR1-220ENST00000609081 MYO5CQ9NQX4 1742 aa24.32■■□□□ 1.48
LMBR1-220ENST00000609081 KDM4FA0A1W2PPD8 638 aa24.31■■□□□ 1.48
LMBR1-220ENST00000609081 DENND4BO75064 1496 aaPredicted RBP24.3■■□□□ 1.48
LMBR1-220ENST00000609081 CEP162Q5TB80 1403 aa24.28■■□□□ 1.48
LMBR1-220ENST00000609081 ADGRL1O94910 1474 aa24.27■■□□□ 1.48
LMBR1-220ENST00000609081 RAPGEF3O95398 923 aa24.27■■□□□ 1.48
LMBR1-220ENST00000609081 FRMPD1Q5SYB0 1578 aa24.26■■□□□ 1.47
LMBR1-220ENST00000609081 RICTORQ6R327 1708 aa24.26■■□□□ 1.47
LMBR1-220ENST00000609081 EFCAB2Q5VUJ9 269 aa24.25■■□□□ 1.47
LMBR1-220ENST00000609081 ZMYM4Q5VZL5 1548 aa24.2■■□□□ 1.47
LMBR1-220ENST00000609081 ARHGAP5Q13017 1502 aa24.19■■□□□ 1.46
LMBR1-220ENST00000609081 MAGI2Q86UL8 1455 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms